Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3A1033G46 Lonicera japonica HOM05D006937 ORTHO05D008747 4.9e-70 267.7 137 100.0
Dinv34099 Davidia involucrata HOM05D003669 ORTHO05D005046 1.6e-60 236.1 132 90.9
CiPaw.06G089000 Carya illinoinensis HOM05D006937 ORTHO05D008747 5.6e-58 227.6 131 87.0
Eucgr.G02475 Eucalyptus grandis HOM05D006937 ORTHO05D008747 5.6e-58 227.6 131 87.0
CSS0011527 Camellia sinensis var. sinensis HOM05D006937 ORTHO05D008747 7.4e-58 227.3 131 89.3
MSTRG.2329 Avicennia marina HOM05D006937 ORTHO05D008747 2.1e-57 225.7 131 85.5
DCAR_018308 Daucus carota HOM05D006937 ORTHO05D008747 3.7e-57 224.9 131 86.3
Glyma.01G053200 Glycine max HOM05D006937 ORTHO05D008747 3.7e-57 224.9 131 85.5
Sopen05g007730 Solanum pennellii HOM05D006937 ORTHO05D008747 8.2e-57 223.8 131 84.7
Gohir.A05G305601 Gossypium hirsutum HOM05D006937 ORTHO05D008747 1.8e-56 222.6 131 84.7
PGSC0003DMG401028340 Solanum tuberosum HOM05D006937 ORTHO05D008747 2.4e-56 222.2 131 85.5
SGA_v2.0_scaffold287G47146 Striga asiatica HOM05D006937 ORTHO05D008747 3.1e-56 221.9 131 85.5
TAR629G2875 Trochodendron aralioides HOM05D006937 ORTHO05D008747 3.1e-56 221.9 131 83.2
CAN.G1642.3 Capsicum annuum HOM05D006937 ORTHO05D008747 4.0e-56 221.5 131 84.0
Ciclev10032989m.g Citrus clementina HOM05D006937 ORTHO05D008747 6.9e-56 220.7 131 84.0
Manes.01G032100 Manihot esculenta HOM05D006937 ORTHO05D008747 6.9e-56 220.7 131 84.0
QL03p069840 Quercus lobata HOM05D006937 ORTHO05D008747 6.9e-56 220.7 130 84.6
Glyma.02G111700 Glycine max HOM05D006937 ORTHO05D008747 9.0e-56 220.3 131 83.2
Gohir.D05G305600 Gossypium hirsutum HOM05D006937 ORTHO05D008747 9.0e-56 220.3 131 84.0
Gorai.009G325600 Gossypium raimondii HOM05D006937 ORTHO05D008747 1.5e-55 219.5 131 83.2
TWI60G0457 Tripterygium wilfordii HOM05D006937 ORTHO05D008747 2.6e-55 218.8 127 86.6
CAN.G964.22 Capsicum annuum HOM05D006937 ORTHO05D008747 3.4e-55 218.4 131 84.0
MELO3C024261.2 Cucumis melo HOM05D006937 ORTHO05D008747 3.4e-55 218.4 130 83.8
Migut.E00068 Erythranthe guttata HOM05D006937 ORTHO05D008747 4.5e-55 218.0 125 84.8
Sed0004013 Sechium edule HOM05D006937 ORTHO05D008747 4.5e-55 218.0 131 81.7
Sed0007221 Sechium edule HOM05D006937 ORTHO05D008747 4.5e-55 218.0 131 82.4
Oeu016239.1 Olea europaea HOM05D006937 ORTHO05D008747 5.8e-55 217.6 129 86.0
MD16G1066900 Malus domestica HOM05D006937 ORTHO05D008747 7.6e-55 217.2 131 82.4
MD13G1068100 Malus domestica HOM05D006937 ORTHO05D008747 1.0e-54 216.9 131 82.4
VMungo1215G2773 Vigna mungo HOM05D006937 ORTHO05D008747 1.3e-54 216.5 130 80.8
CsaV3_7G033500 Cucumis sativus L. HOM05D006937 ORTHO05D008747 1.7e-54 216.1 130 82.3
Lj6g0000786 Lotus japonicus HOM05D006937 ORTHO05D008747 1.7e-54 216.1 131 80.9
ATR0730G163 Amborella trichopoda HOM05D006937 ORTHO05D008747 2.2e-54 215.7 131 81.7
Cc11_g12540 Coffea canephora HOM05D006937 ORTHO05D008747 2.2e-54 215.7 133 84.2
Thecc.02G339100 Theobroma cacao HOM05D006937 ORTHO05D008747 2.2e-54 215.7 131 83.2
Prupe.1G280000 Prunus persica HOM05D006937 ORTHO05D008747 2.9e-54 215.3 131 82.4
Eucgr.D01709 Eucalyptus grandis HOM05D006937 ORTHO05D008747 6.5e-54 214.2 129 83.7
Phvul.001G169600 Phaseolus vulgaris HOM05D006937 ORTHO05D008747 8.4e-54 213.8 131 80.2
Atru.chr11.1713 Acer truncatum HOM05D006937 ORTHO05D008747 1.4e-53 213.0 130 83.8
COL.COLO4_27967 Corchorus olitorius HOM05D006937 ORTHO05D008747 1.4e-53 213.0 131 80.9
SGA_v2.0_scaffold114G32026 Striga asiatica HOM05D006937 ORTHO05D008747 1.9e-53 212.6 141 78.7
Lj1g0016193 Lotus japonicus HOM05D006937 ORTHO05D008747 2.5e-53 212.2 131 79.4
Lalb_Chr10g0098481 Lupinus albus HOM05D006937 ORTHO05D008747 2.5e-53 212.2 130 80.0
EL10Ac6g13467 Beta vulgaris HOM05D006937 ORTHO05D008747 9.3e-53 210.3 131 80.2
Nn3g17337 Nelumbo nucifera HOM05D006937 ORTHO05D008747 1.2e-52 209.9 131 79.4
GSVIVG01025409001 Vitis vinifera HOM05D006937 ORTHO05D008747 1.2e-52 209.9 131 80.2
Medtr5g042620 Medicago truncatula HOM05D006937 ORTHO05D008747 2.1e-52 209.1 131 75.6
ECA246G2190 Erigeron canadensis HOM05D006937 ORTHO05D008747 3.5e-52 208.4 130 81.5
CANSAT64G0520 Cannabis sativa HOM05D006937 ORTHO05D008747 4.6e-52 208.0 131 77.9
PSO675G6138 Papaver somniferum HOM05D006937 ORTHO05D008747 7.9e-52 207.2 131 78.6
HanXRQChr17g0537301 Helianthus annuus HOM05D006937 ORTHO05D008747 1.8e-51 206.1 132 79.5
FvH4_4g30700 Fragaria vesca HOM05D006937 ORTHO05D008747 3.9e-51 204.9 131 77.9
Os07g0595800 Oryza sativa ssp. japonica HOM05D006937 ORTHO05D008747 5.1e-51 204.5 127 77.2
Potri.008G091400 Populus trichocarpa HOM05D006937 ORTHO05D008747 6.7e-51 204.1 131 77.9
Lsat_1_v5_gn_3_20221 Lactuca sativa HOM05D006937 ORTHO05D008747 1.1e-50 203.4 124 83.1
FAN17G2174 Fragaria x ananassa HOM05D006937 ORTHO05D008747 1.5e-50 203.0 131 77.1
Psat2g127680 Pisum sativum HOM05D006937 ORTHO05D008747 1.5e-50 203.0 130 75.4
RcHm_v2.0_Chr4g0439101 Rosa chinensis HOM05D006937 ORTHO05D008747 1.5e-50 203.0 131 77.1
unitig_744.g24284 Utricularia gibba HOM05D006937 ORTHO05D008747 1.9e-50 202.6 143 73.4
Zm00001eb326530 Zea mays HOM05D006937 ORTHO05D008747 1.9e-50 202.6 127 76.4
FAN07G0310 Fragaria x ananassa HOM05D006937 ORTHO05D008747 5.7e-50 201.1 131 76.3
TPR.G19944 Trifolium pratense HOM05D006937 ORTHO05D008747 1.3e-49 199.9 133 69.9
Aqoxy3G03499 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 2.2e-49 199.1 132 74.2
Aqoxy5G02063 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 2.8e-49 198.7 131 74.8
arahy.Tifrunner.gnm1.ann1.TRF8LB Arachis hypogaea HOM05D006937 ORTHO05D008747 1.4e-48 196.4 130 76.2
Haze_11954 Corylus avellana HOM05D006937 ORTHO05D008747 4.1e-48 194.9 143 74.1
Rhsim12G0077900 Rhododendron simsii HOM05D006937 ORTHO05D008747 4.1e-48 194.9 111 88.3
Nitab4.5_0000391g0170 Nicotiana tabacum HOM05D006937 ORTHO05D008747 6.9e-48 194.1 130 79.2
Hund25447 Selenicereus undatus HOM05D006937 ORTHO05D008747 1.0e-46 190.3 131 74.8
arahy.Tifrunner.gnm1.ann1.A48TS2 Arachis hypogaea HOM05D006937 ORTHO05D008747 1.7e-46 189.5 137 72.3
arahy.Tifrunner.gnm1.ann1.8BL9U8 Arachis hypogaea HOM05D006937 ORTHO05D008747 2.9e-46 188.7 124 77.4
Sc11g0000570 Simmondsia chinensis HOM05D006937 ORTHO05D008747 1.1e-45 186.8 109 85.3
AUR62024142 Chenopodium quinoa HOM05D006937 ORTHO05D008747 2.5e-45 185.7 131 74.0
PSO541G5056 Papaver somniferum HOM05D006937 ORTHO05D008747 2.5e-45 185.7 131 72.5
SEGI_41088 Sequoiadendron giganteum HOM05D006937 ORTHO05D008747 3.2e-45 185.3 126 70.6
Nitab4.5_0008978g0010 Nicotiana tabacum HOM05D006937 ORTHO05D008747 5.5e-45 184.5 177 62.1
Duzib268G1027 Durio zibethinus HOM05D006937 ORTHO05D008747 1.2e-44 183.3 131 72.5
Actinidia31958 Actinidia chinensis HOM05D003669 ORTHO05D005046 2.1e-44 182.6 140 72.1
Ca_04880_v3 Cicer arietinum L. HOM05D006937 ORTHO05D008747 1.4e-43 179.9 112 75.9
AUR62005588 Chenopodium quinoa HOM05D006937 ORTHO05D008747 3.0e-43 178.7 127 73.2
CDE11G0882 Ceratophyllum demersum HOM05D006937 ORTHO05D008747 6.7e-43 177.6 156 61.5
Aqoxy5G02982 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 2.4e-40 169.1 131 67.2
HPP92_013408 Vanilla planifolia HOM05D006937 ORTHO05D008747 2.4e-40 169.1 127 66.9
PGR142G2813 Punica granatum HOM05D006937 ORTHO05D008747 4.1e-40 168.3 130 65.4
PGR119G1353 Punica granatum HOM05D006937 ORTHO05D008747 6.9e-40 167.5 135 64.4
Peaxi162Scf00222g00024 Petunia axillaris HOM05D006937 ORTHO05D008747 3.8e-38 161.8 116 73.3
SHI35111 Sapria himalayana HOM05D006937 ORTHO05D008747 6.5e-38 161.0 132 63.6
AT1G26660 Arabidopsis thaliana HOM05D006937 ORTHO05D008747 1.1e-37 160.2 129 60.5
Carub.0001s2437 Capsella rubella HOM05D006937 ORTHO05D008747 4.2e-37 158.3 129 60.5
AL1G39070 Arabidopsis lyrata HOM05D006937 ORTHO05D008747 7.2e-37 157.5 129 58.1
Thhalv10008997m.g Eutrema salsugineum HOM05D006937 ORTHO05D008747 9.4e-37 157.1 129 58.9
THA.LOC104808654 Tarenaya hassleriana HOM05D006937 ORTHO05D008747 9.4e-37 157.1 129 60.5
Sp6g00050 Schrenkiella parvula HOM05D006937 ORTHO05D008747 1.2e-36 156.8 129 58.9
BcaC06g35132 Brassica carinata HOM05D006937 ORTHO05D008747 3.6e-36 155.2 129 59.7
A07p13030 Brassica napus HOM05D001252 ORTHO05D005295 3.6e-36 155.2 129 59.7
Aa31LG7G8430 Aethionema arabicum HOM05D006937 ORTHO05D008747 7.9e-36 154.1 129 58.9
BcaB03g14081 Brassica carinata HOM05D006937 ORTHO05D008747 7.9e-36 154.1 129 58.9
BraA07t29074Z Brassica rapa HOM05D001252 ORTHO05D005295 7.9e-36 154.1 129 58.9
FAN12G3635 Fragaria x ananassa HOM05D006937 ORTHO05D008747 3.9e-35 151.8 111 72.1
BcaB05g21932 Brassica carinata HOM05D006937 ORTHO05D008747 5.1e-35 151.4 129 57.4
C07p19480 Brassica napus HOM05D001252 ORTHO05D005295 8.8e-35 150.6 129 58.1
BolC7t42467H Brassica oleracea HOM05D001252 ORTHO05D001661 8.8e-35 150.6 129 58.1
AagrBONN_evm.TU.Sc2ySwM_228.447 Anthoceros agrestis HOM05D006937 ORTHO05D008747 9.7e-34 147.1 123 57.7
Mapoly0006s0094 Marchantia polymorpha HOM05D006937 ORTHO05D008747 1.2e-31 140.2 124 55.6
Pp3c21_19110 Physcomitrium patens HOM05D006937 ORTHO05D008747 1.2e-31 140.2 123 54.5
Sabra08G0068400 Salix brachista HOM05D006937 ORTHO05D008747 1.2e-31 140.2 116 62.9
arahy.Tifrunner.gnm1.ann1.J4SELD Arachis hypogaea HOM05D006937 ORTHO05D008747 1.5e-31 139.8 91 74.7
CBR_g48697 Chara braunii HOM05D006937 ORTHO05D008747 4.5e-31 138.3 128 48.4
SalBow8G3842 Salvia bowleyana HOM05D006937 ORTHO05D008747 1.3e-30 136.7 142 52.1
CSS0016362 Camellia sinensis var. sinensis HOM05D006937 ORTHO05D008747 2.2e-30 136.0 128 64.8
PSO357G0488 Papaver somniferum HOM05D006937 ORTHO05D008747 2.3e-27 125.9 81 75.3
Ah.02g130690 Amaranthus hybridus HOM05D006937 ORTHO05D008747 8.8e-27 124.0 131 54.2
arahy.Tifrunner.gnm1.ann1.K4YSPN Arachis hypogaea HOM05D006937 ORTHO05D008747 2.6e-23 112.5 65 81.5
ClCG09G001850 Citrullus lanatus HOM05D006937 ORTHO05D008747 1.8e-19 99.8 56 83.9
BcaC05g26400 Brassica carinata HOM05D004525 ORTHO05D005295 7.7e-15 84.3 61 65.6
A09p40080 Brassica napus HOM05D004525 ORTHO05D005295 2.2e-14 82.8 75 53.3
Potri.010G163600 Populus trichocarpa HOM05D006937 ORTHO05D008747 9.4e-13 77.4 56 75.0
Sabra10G0124400 Salix brachista HOM05D006937 ORTHO05D008747 9.4e-13 77.4 105 45.7
Cc00_g19610 Coffea canephora HOM05D000421 ORTHO05D013979 6.6e-06 54.7 34 79.4
Cc08_g04320 Coffea canephora HOM05D006937 ORTHO05D013979 6.6e-06 54.7 34 79.4


User provided reference genes

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