Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3A1018T64 Lonicera japonica HOM05D007389 ORTHO05D009400 4.6e-183 644.4 324 100.0
CSS0047863 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 8.8e-118 427.6 363 61.7
Actinidia16624 Actinidia chinensis HOM05D007389 ORTHO05D009400 5.3e-115 418.3 363 61.2
GSVIVG01011940001 Vitis vinifera HOM05D007389 ORTHO05D009400 3.5e-114 415.6 354 61.0
vmacro10536 Vaccinium macrocarpon HOM05D007389 ORTHO05D009400 2.2e-113 412.9 362 60.2
Rhsim09G0111300 Rhododendron simsii HOM05D007389 ORTHO05D009400 2.9e-113 412.5 362 58.8
CSS0013871 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 1.1e-112 410.6 342 62.9
Cfa018619 Carpinus fangiana HOM05D007389 ORTHO05D009400 1.5e-104 383.6 363 56.2
Hma1.2p1_0406F.1_g146090 Hydrangea macrophylla HOM05D007389 ORTHO05D009400 2.5e-104 382.9 364 57.4
TWI31G0236 Tripterygium wilfordii HOM05D007389 ORTHO05D009400 9.4e-104 380.9 362 55.2
CiPaw.15G004300 Carya illinoinensis HOM05D007389 ORTHO05D009400 4.7e-103 378.6 348 58.3
Gohir.A12G169500 Gossypium hirsutum HOM05D007389 ORTHO05D009400 4.7e-103 378.6 360 54.7
TAR371G0503 Trochodendron aralioides HOM05D007389 ORTHO05D009400 4.7e-103 378.6 339 60.5
Thecc.02G359800 Theobroma cacao HOM05D007389 ORTHO05D009400 2.3e-102 376.3 363 54.3
COL.COLO4_07880 Corchorus olitorius HOM05D007389 ORTHO05D009400 3.0e-102 375.9 363 54.8
Gohir.D12G172800 Gossypium hirsutum HOM05D007389 ORTHO05D009400 6.8e-102 374.8 360 54.2
Gorai.008G185300 Gossypium raimondii HOM05D007389 ORTHO05D009400 2.6e-101 372.9 360 53.9
Nn4g23752 Nelumbo nucifera HOM05D007389 ORTHO05D009400 2.6e-101 372.9 363 54.5
PGSC0003DMG400007468 Solanum tuberosum HOM05D007389 ORTHO05D009400 5.7e-101 371.7 362 54.4
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 2.2e-100 369.8 351 56.4
Ciclev10031830m.g Citrus clementina HOM05D007389 ORTHO05D009400 2.8e-100 369.4 364 54.9
Nitab4.5_0014175g0010 Nicotiana tabacum HOM05D007389 ORTHO05D009400 4.8e-100 368.6 363 54.3
Manes.06G071400 Manihot esculenta HOM05D007389 ORTHO05D009400 1.8e-99 366.7 365 52.6
FvH4_4g27970 Fragaria vesca HOM05D007389 ORTHO05D009400 9.1e-99 364.4 363 53.2
RcHm_v2.0_Chr4g0435681 Rosa chinensis HOM05D007389 ORTHO05D009400 1.6e-98 363.6 365 54.0
ECA234G1470 Erigeron canadensis HOM05D007389 ORTHO05D009400 3.5e-98 362.5 363 52.6
FAN17G2097 Fragaria x ananassa HOM05D007389 ORTHO05D009400 3.5e-98 362.5 363 53.2
Potri.010G128700 Populus trichocarpa HOM05D007389 ORTHO05D009400 3.5e-98 362.5 364 53.6
Cc11_g10500 Coffea canephora HOM05D007389 ORTHO05D009400 1.3e-97 360.5 363 52.9
Sopen04g002110 Solanum pennellii HOM05D007389 ORTHO05D009400 1.3e-97 360.5 362 53.9
Prupe.1G306500 Prunus persica HOM05D007389 ORTHO05D009400 1.5e-96 357.1 364 53.3
Eucgr.B03042 Eucalyptus grandis HOM05D007389 ORTHO05D009400 2.5e-96 356.3 354 54.0
HanXRQChr16g0529211 Helianthus annuus HOM05D007389 ORTHO05D009400 3.6e-95 352.4 363 52.1
Sabra10G0097900 Salix brachista HOM05D007389 ORTHO05D009400 3.0e-94 349.4 364 52.2
ClCG05G022970 Citrullus lanatus HOM05D007389 ORTHO05D009400 5.2e-94 348.6 362 52.8
Nn3g17765 Nelumbo nucifera HOM05D007389 ORTHO05D009400 9.8e-93 344.4 329 54.4
Nitab4.5_0000280g0020 Nicotiana tabacum HOM05D007389 ORTHO05D009400 1.3e-92 344.0 363 53.2
MD13G1045500 Malus domestica HOM05D007389 ORTHO05D009400 1.7e-92 343.6 363 51.5
ATR0681G192 Amborella trichopoda HOM05D007389 ORTHO05D009400 2.2e-92 343.2 353 50.4
PGR102G2947 Punica granatum HOM05D007389 ORTHO05D009400 3.7e-92 342.4 364 50.3
SEGI_35624 Sequoiadendron giganteum HOM05D007389 ORTHO05D009400 8.3e-92 341.3 351 52.1
Peaxi162Scf00086g00615 Petunia axillaris HOM05D007389 ORTHO05D009400 2.4e-91 339.7 362 52.2
SalBow8G0691 Salvia bowleyana HOM05D007389 ORTHO05D009400 5.4e-91 338.6 356 50.6
Lalb_Chr10g0099831 Lupinus albus HOM05D007389 ORTHO05D009400 7.0e-91 338.2 366 50.5
CsaV3_5G034040 Cucumis sativus L. HOM05D007389 ORTHO05D009400 3.5e-90 335.9 362 51.1
Sed0014526 Sechium edule HOM05D007389 ORTHO05D009400 1.7e-89 333.6 361 50.4
Phvul.003G028200 Phaseolus vulgaris HOM05D007389 ORTHO05D009400 3.3e-88 329.3 365 49.3
Lsat_1_v5_gn_4_20121 Lactuca sativa HOM05D007389 ORTHO05D009400 3.6e-87 325.9 366 48.9
Lj2g0025946 Lotus japonicus HOM05D007389 ORTHO05D009400 1.8e-86 323.6 367 49.6
Sc11g0003170 Simmondsia chinensis HOM05D007389 ORTHO05D009400 8.9e-86 321.2 363 49.3
MELO3C012220.2 Cucumis melo HOM05D007389 ORTHO05D009400 2.0e-85 320.1 337 52.8
Glyma.02G098600 Glycine max HOM05D007389 ORTHO05D009400 5.8e-85 318.5 368 47.8
Migut.E00312 Erythranthe guttata HOM05D007389 ORTHO05D009400 2.2e-84 316.6 363 47.7
Hund25095 Selenicereus undatus HOM05D007389 ORTHO05D009400 8.3e-84 314.7 364 46.7
VMungo1215G1613 Vigna mungo HOM05D007389 ORTHO05D009400 4.6e-82 308.9 345 48.1
FAN22G0259 Fragaria x ananassa HOM05D007389 ORTHO05D009400 7.8e-82 308.1 323 52.0
Oeu042041.1 Olea europaea HOM05D007389 ORTHO05D009400 1.7e-81 307.0 309 54.7
AUR62035272 Chenopodium quinoa HOM05D007389 ORTHO05D009400 7.3e-80 301.6 361 46.8
Pp3c18_11800 Physcomitrium patens HOM05D007389 ORTHO05D009400 2.8e-79 299.7 353 46.2
AagrBONN_evm.TU.Sc2ySwM_228.4489 Anthoceros agrestis HOM05D007389 ORTHO05D009400 6.2e-79 298.5 352 46.0
Duzib268G0586 Durio zibethinus HOM05D007389 ORTHO05D009400 1.1e-78 297.7 318 50.3
Dinv21123 Davidia involucrata HOM05D007389 ORTHO05D009400 2.3e-78 296.6 199 75.9
SGA_v2.0_scaffold124G33583 Striga asiatica HOM05D007389 ORTHO05D009400 3.1e-78 296.2 367 45.8
THA.LOC104825707 Tarenaya hassleriana HOM05D007389 ORTHO05D009400 1.9e-75 287.0 362 43.4
CDE02G3618 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 6.0e-74 282.0 367 42.5
CDE08G0863 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 1.0e-73 281.2 353 43.6
Mapoly0108s0021 Marchantia polymorpha HOM05D007389 ORTHO05D009400 1.3e-73 280.8 355 43.1
SMO361G0332 Selaginella moellendorffii HOM05D007389 ORTHO05D009400 1.7e-73 280.4 352 45.5
unitig_27.g25245 Utricularia gibba HOM05D007389 ORTHO05D009400 6.2e-71 271.9 362 42.3
PSO063G2802 Papaver somniferum HOM05D007389 ORTHO05D009400 5.8e-69 265.4 375 44.0
Cpa.g.sc1.212 Carica papaya HOM05D007389 ORTHO05D009400 7.6e-69 265.0 199 66.3
QL01p044805 Quercus lobata HOM05D007389 ORTHO05D009400 1.7e-68 263.8 199 68.3
Thhalv10009351m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 2.5e-64 250.0 362 40.6
Sp1g11820 Schrenkiella parvula HOM05D007389 ORTHO05D009400 4.3e-64 249.2 362 40.1
Pp3c15_5000 Physcomitrium patens HOM05D007389 ORTHO05D009400 2.1e-63 246.9 378 38.4
BraA08t35158Z Brassica rapa HOM05D007389 ORTHO05D009400 2.4e-62 243.4 362 39.8
EL10Ac6g14465 Beta vulgaris HOM05D007389 ORTHO05D009400 1.2e-61 241.1 465 34.2
C08p16080 Brassica napus HOM05D007389 ORTHO05D009400 5.8e-61 238.8 362 39.0
A08p32350 Brassica napus HOM05D007389 ORTHO05D009400 1.7e-60 237.3 362 39.2
BolC8t49230H Brassica oleracea HOM05D007389 ORTHO05D009400 6.4e-60 235.3 362 38.4
CARHR013690 Cardamine hirsuta HOM05D007389 ORTHO05D009400 1.4e-59 234.2 355 39.7
AT1G13310 Arabidopsis thaliana HOM05D007389 ORTHO05D009400 3.2e-59 233.0 366 37.4
AagrBONN_evm.TU.Sc2ySwM_362.2055 Anthoceros agrestis HOM05D007389 ORTHO05D009400 1.5e-56 224.2 229 52.8
AL1G25070 Arabidopsis lyrata HOM05D007389 ORTHO05D009400 7.3e-56 221.9 355 37.7
Carub.0001s1304 Capsella rubella HOM05D007389 ORTHO05D009400 6.2e-55 218.8 355 37.7
HPP92_023813 Vanilla planifolia HOM05D007389 ORTHO05D009400 1.2e-53 214.5 354 38.7
Aa31LG1G1460 Aethionema arabicum HOM05D007389 ORTHO05D009400 1.5e-53 214.2 368 37.5
HanXRQChr17g0567921 Helianthus annuus HOM05D007389 ORTHO05D009400 1.5e-53 214.2 248 46.4
Actinidia14859 Actinidia chinensis HOM05D007389 ORTHO05D009400 6.0e-50 202.2 235 52.8
Thhalv10023040m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 1.2e-42 177.9 365 33.7
AUR62002912 Chenopodium quinoa HOM05D007389 ORTHO05D009400 1.8e-41 174.1 361 32.4
CBR_g39725 Chara braunii HOM05D001740 ORTHO05D001468 1.1e-38 164.9 200 45.5
Duzib251G0237 Durio zibethinus HOM05D007389 ORTHO05D009400 5.3e-38 162.5 143 58.7
QL01p044810 Quercus lobata HOM05D007389 ORTHO05D009400 6.5e-36 155.6 114 62.3
BcaC06g31117 Brassica carinata HOM05D007389 ORTHO05D009400 2.5e-32 143.7 364 29.7
FAN12G3113 Fragaria x ananassa HOM05D007389 ORTHO05D009400 1.6e-31 141.0 118 61.0
A06p42500 Brassica napus HOM05D001825 ORTHO05D002336 3.4e-29 133.3 345 29.6
BraA06t27163Z Brassica rapa HOM05D001825 ORTHO05D002336 3.4e-29 133.3 345 29.6
Nitab4.5_0000280g0130 Nicotiana tabacum HOM05D007389 ORTHO05D009400 1.0e-28 131.7 152 48.7
Lalb_Chr04g0254881 Lupinus albus HOM05D007389 ORTHO05D009400 5.0e-28 129.4 117 51.3
TAR573G0003 Trochodendron aralioides HOM05D007389 ORTHO05D009400 2.4e-22 110.5 114 55.3
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 1.7e-20 104.4 175 40.6
PSO782G3111 Papaver somniferum HOM05D007389 ORTHO05D009400 2.2e-20 104.0 117 45.3
SalBow8G3870 Salvia bowleyana HOM05D007389 ORTHO05D009400 2.5e-19 100.5 100 53.0
BcaC06g33956 Brassica carinata HOM05D007389 ORTHO05D009400 2.7e-18 97.1 367 26.7
C07p34700 Brassica napus HOM05D001825 ORTHO05D002336 4.5e-13 79.7 308 25.6
BolC7t44001H Brassica oleracea HOM05D001825 ORTHO05D002336 4.5e-13 79.7 308 25.6
TAR629G0747 Trochodendron aralioides HOM05D007389 ORTHO05D009400 1.4e-11 74.7 91 49.5
MCO11G211 Micromonas commoda HOM05D007389 ORTHO05D009400 4.2e-11 73.2 413 23.2


User provided reference genes

Program Settings