Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0027443 Lotus japonicus HOM05D006896 ORTHO05D007622 1.5e-89 333.2 209 100.0
Lj5g0019895 Lotus japonicus HOM05D006896 ORTHO05D007622 8.9e-47 191.0 137 99.3
Phvul.006G182200 Phaseolus vulgaris HOM05D006896 ORTHO05D007622 4.6e-35 152.1 153 54.9
Psat6g044520 Pisum sativum HOM05D006896 ORTHO05D007622 1.3e-34 150.6 149 57.0
Lalb_Chr02g0144491 Lupinus albus HOM05D006896 ORTHO05D007622 1.1e-33 147.5 212 49.1
VMungo0540G0426 Vigna mungo HOM05D006896 ORTHO05D007622 7.3e-33 144.8 152 58.6
Glyma.15G077800 Glycine max HOM05D006896 ORTHO05D007622 2.1e-32 143.3 128 59.4
Glyma.15G171400 Glycine max HOM05D006896 ORTHO05D007622 2.1e-32 143.3 128 59.4
arahy.Tifrunner.gnm1.ann1.530D0B Arachis hypogaea HOM05D006896 ORTHO05D007622 2.6e-30 136.3 136 53.7
arahy.Tifrunner.gnm1.ann1.73V7U9 Arachis hypogaea HOM05D006896 ORTHO05D007622 5.8e-30 135.2 138 52.9
Ca_12592_v3 Cicer arietinum L. HOM05D006896 ORTHO05D007622 1.5e-25 120.6 139 51.8
Medtr3g023230 Medicago truncatula HOM05D006896 ORTHO05D007622 5.6e-25 118.6 153 47.7
TPR.G36966 Trifolium pratense HOM05D007426 ORTHO05D009167 2.8e-24 116.3 148 48.0
Medtr1g031730 Medicago truncatula HOM05D006896 ORTHO05D007622 1.2e-22 110.9 207 40.6
CiPaw.04G076100 Carya illinoinensis HOM05D006896 ORTHO05D007622 3.0e-18 96.3 150 40.7
Gohir.A09G147400 Gossypium hirsutum HOM05D006896 ORTHO05D007622 6.7e-18 95.1 131 45.0
Gorai.006G164500 Gossypium raimondii HOM05D006896 ORTHO05D007622 1.5e-17 94.0 131 45.0
CANSAT21G0002 Cannabis sativa HOM05D006896 ORTHO05D007622 1.9e-17 93.6 147 43.5
Gohir.D09G143000 Gossypium hirsutum HOM05D006896 ORTHO05D007622 1.9e-17 93.6 131 45.0
QL06p022383 Quercus lobata HOM05D006896 ORTHO05D007622 2.5e-17 93.2 149 40.9
Cpa.g.sc25.137 Carica papaya HOM05D006896 ORTHO05D007622 2.8e-16 89.7 135 40.7
Nn1g00183 Nelumbo nucifera HOM05D006896 ORTHO05D007622 3.7e-16 89.4 211 44.1
MELO3C024432.2 Cucumis melo HOM05D006896 ORTHO05D007622 6.2e-16 88.6 135 37.0
MD15G1357300 Malus domestica HOM05D006896 ORTHO05D007622 1.4e-15 87.4 217 43.3
TAR636G1166 Trochodendron aralioides HOM05D006896 ORTHO05D007622 5.3e-15 85.5 150 39.3
GSVIVG01016958001 Vitis vinifera HOM05D006896 ORTHO05D007622 5.3e-15 85.5 131 38.9
Eucgr.F03083 Eucalyptus grandis HOM05D006896 ORTHO05D007622 9.0e-15 84.7 151 39.7
CsaV3_7G035230 Cucumis sativus L. HOM05D006896 ORTHO05D007622 1.2e-14 84.3 135 35.6
Hund07447 Selenicereus undatus HOM05D006896 ORTHO05D007622 2.9e-13 79.7 157 43.3
Aqoxy3G03866 Aquilegia oxysepala HOM05D006896 ORTHO05D007622 1.1e-12 77.8 145 36.6
Thecc.01G002700 Theobroma cacao HOM05D006896 ORTHO05D007622 1.1e-12 77.8 164 36.6
Ciclev10022257m.g Citrus clementina HOM05D006896 ORTHO05D007622 2.5e-12 76.6 131 38.9
Ciclev10026494m.g Citrus clementina HOM05D006896 ORTHO05D007622 2.5e-12 76.6 131 38.2
Cc02_g30070 Coffea canephora HOM05D006896 ORTHO05D007622 1.2e-11 74.3 103 42.7
Nitab4.5_0001057g0240 Nicotiana tabacum HOM05D006896 ORTHO05D007622 1.6e-11 73.9 152 35.5
BcaC03g16098 Brassica carinata HOM05D006896 ORTHO05D007622 2.1e-11 73.6 136 36.8
A02p24490 Brassica napus HOM05D006896 ORTHO05D007622 2.7e-11 73.2 136 36.8
C02p38670 Brassica napus HOM05D006896 ORTHO05D007622 2.7e-11 73.2 136 36.8
BolC2t09885H Brassica oleracea HOM05D006896 ORTHO05D007622 2.7e-11 73.2 136 36.8
BraA02t07439Z Brassica rapa HOM05D006896 ORTHO05D007622 2.7e-11 73.2 136 36.8
Sp6g01500 Schrenkiella parvula HOM05D006896 ORTHO05D007622 1.0e-10 71.2 126 38.9
BcaB05g23986 Brassica carinata HOM05D006896 ORTHO05D007622 1.8e-10 70.5 146 36.3
ClCG09G000270 Citrullus lanatus HOM05D006896 ORTHO05D007622 1.8e-10 70.5 99 40.4
Haze_24358 Corylus avellana HOM05D006896 ORTHO05D007622 1.8e-10 70.5 158 37.3
THA.LOC104825918 Tarenaya hassleriana HOM05D006896 ORTHO05D007622 2.3e-10 70.1 130 37.7
Nitab4.5_0002546g0010 Nicotiana tabacum HOM05D006896 ORTHO05D007622 3.0e-10 69.7 152 32.9
Thhalv10023695m.g Eutrema salsugineum HOM05D006896 ORTHO05D007622 1.1e-09 67.8 134 36.6
AL6G51750 Arabidopsis lyrata HOM05D006896 ORTHO05D007622 1.5e-09 67.4 148 35.1
EL10Ac4g10160 Beta vulgaris HOM05D006896 ORTHO05D007622 1.5e-09 67.4 121 36.4
PGR102G1058 Punica granatum HOM05D006896 ORTHO05D007622 1.5e-09 67.4 153 35.9
AT4G01590 Arabidopsis thaliana HOM05D006896 ORTHO05D007622 1.9e-09 67.0 131 35.9
EL10Ac4g10155 Beta vulgaris HOM05D006896 ORTHO05D007622 1.9e-09 67.0 121 36.4
PSO210G5688 Papaver somniferum HOM05D006896 ORTHO05D007622 1.9e-09 67.0 152 38.8
Potri.003G047600 Populus trichocarpa HOM05D006896 ORTHO05D007622 1.9e-09 67.0 134 35.8
Cfa015335 Carpinus fangiana HOM05D006896 ORTHO05D007622 7.4e-09 65.1 141 34.8
Thhalv10028974m.g Eutrema salsugineum HOM05D006896 ORTHO05D007622 9.7e-09 64.7 134 38.1
Peaxi162Scf00152g00734 Petunia axillaris HOM05D006896 ORTHO05D007622 9.7e-09 64.7 152 32.9
Cc04_g02450 Coffea canephora HOM05D006896 ORTHO05D007622 1.3e-08 64.3 103 37.9
EL10Ac4g10121 Beta vulgaris HOM05D006896 ORTHO05D007622 8.2e-08 61.6 131 35.9
EL10Ac4g10168 Beta vulgaris HOM05D006896 ORTHO05D007622 8.2e-08 61.6 131 35.9
Prupe.1G582300 Prunus persica HOM05D006896 ORTHO05D007622 8.2e-08 61.6 117 35.0
Zm00001eb122950 Zea mays HOM05D006896 ORTHO05D007622 1.8e-07 60.5 104 35.6
Solyc06g083505.1 Solanum lycopersicum HOM05D006896 ORTHO05D007622 3.1e-07 59.7 126 29.4
Os07g0611600 Oryza sativa ssp. japonica HOM05D006896 ORTHO05D007622 5.3e-07 58.9 104 36.5
Aa31LG5G1310 Aethionema arabicum HOM05D006896 ORTHO05D007622 6.9e-07 58.5 137 32.8
C07p10600 Brassica napus HOM05D006896 ORTHO05D007622 9.0e-07 58.2 147 32.7
CARHR250080 Cardamine hirsuta HOM05D006896 ORTHO05D007622 9.0e-07 58.2 122 36.1
Sabra03G0029600 Salix brachista HOM05D000996 ORTHO05D000858 9.0e-07 58.2 140 33.6
BolC7t41525H Brassica oleracea HOM05D006896 ORTHO05D007622 1.5e-06 57.4 147 32.7
BcaC06g35810 Brassica carinata HOM05D006896 ORTHO05D007622 4.5e-06 55.8 120 33.3
unitig_27.g25077 Utricularia gibba HOM05D006896 ORTHO05D007622 5.9e-06 55.5 146 34.2
Carub.0003s1963 Capsella rubella HOM05D006896 ORTHO05D007622 1.0e-05 54.7 137 34.3
TAR636G1722 Trochodendron aralioides HOM05D006896 ORTHO05D007622 1.0e-05 54.7 87 43.7


User provided reference genes

Program Settings