Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0026821 Lotus japonicus HOM05D006650 ORTHO05D008401 6.3e-166 587.4 308 100.0
Medtr6g021510 Medicago truncatula HOM05D006650 ORTHO05D008401 8.1e-113 411.0 305 75.7
Psat1g085040 Pisum sativum HOM05D006650 ORTHO05D008401 4.0e-112 408.7 306 76.8
Ca_04377_v3 Cicer arietinum L. HOM05D006650 ORTHO05D008401 2.6e-111 406.0 306 76.1
Glyma.02G128500 Glycine max HOM05D006650 ORTHO05D008401 5.8e-111 404.8 308 75.3
Lalb_Chr10g0099501 Lupinus albus HOM05D006650 ORTHO05D008401 2.7e-108 396.0 306 74.2
arahy.Tifrunner.gnm1.ann1.1PS8SX Arachis hypogaea HOM05D006650 ORTHO05D008401 1.7e-107 393.3 309 72.5
Phvul.003G034600 Phaseolus vulgaris HOM05D006650 ORTHO05D008401 2.3e-107 392.9 309 74.8
TPR.G21643 Trifolium pratense HOM05D006650 ORTHO05D008401 1.1e-106 390.6 305 73.4
arahy.Tifrunner.gnm1.ann1.P12GZY Arachis hypogaea HOM05D006650 ORTHO05D008401 1.6e-105 386.7 311 72.3
Cfa008806 Carpinus fangiana HOM05D006650 ORTHO05D008401 1.7e-94 350.1 309 66.0
Prupe.1G299800 Prunus persica HOM05D006650 ORTHO05D008401 1.3e-91 340.5 314 64.0
QL03p046578 Quercus lobata HOM05D006650 ORTHO05D008401 1.9e-90 336.7 272 67.6
VMungo1215G2545 Vigna mungo HOM05D006650 ORTHO05D008401 5.6e-90 335.1 233 80.7
CiPaw.05G118400 Carya illinoinensis HOM05D006650 ORTHO05D008401 2.8e-89 332.8 312 62.8
CsaV3_6G003950 Cucumis sativus L. HOM05D006650 ORTHO05D008401 4.8e-89 332.0 310 62.3
CANSAT64G2403 Cannabis sativa HOM05D006650 ORTHO05D008401 1.4e-88 330.5 312 62.8
Sed0026335 Sechium edule HOM05D006650 ORTHO05D008401 3.1e-88 329.3 254 68.9
MD13G1052300 Malus domestica HOM05D006650 ORTHO05D008401 9.0e-88 327.8 285 65.6
ClCG08G004790 Citrullus lanatus HOM05D006650 ORTHO05D008401 7.6e-87 324.7 289 64.0
RcHm_v2.0_Chr4g0436681 Rosa chinensis HOM05D006650 ORTHO05D008401 1.3e-86 323.9 256 68.4
Manes.14G094300 Manihot esculenta HOM05D006650 ORTHO05D008401 2.2e-86 323.2 310 60.6
Atru.chr11.1444 Acer truncatum HOM05D006650 ORTHO05D008401 3.8e-86 322.4 282 63.1
MELO3C011665.2 Cucumis melo HOM05D006650 ORTHO05D008401 6.5e-86 321.6 313 61.0
FAN07G0603 Fragaria x ananassa HOM05D006650 ORTHO05D008401 8.4e-86 321.2 282 64.2
Rhsim09G0116700 Rhododendron simsii HOM05D006650 ORTHO05D008401 5.5e-85 318.5 315 58.7
Ciclev10032286m.g Citrus clementina HOM05D006650 ORTHO05D008401 9.3e-85 317.8 270 63.7
FAN17G3038 Fragaria x ananassa HOM05D006650 ORTHO05D008401 2.7e-84 316.2 292 61.3
Rhsim09G0116200 Rhododendron simsii HOM05D006650 ORTHO05D008401 3.5e-84 315.8 317 58.0
TWI75G1831 Tripterygium wilfordii HOM05D006650 ORTHO05D008401 3.5e-84 315.8 238 67.6
THA.LOC104821976 Tarenaya hassleriana HOM05D006650 ORTHO05D008401 6.0e-84 315.1 264 64.8
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 7.9e-84 314.7 223 72.6
Hma1.2p1_1424F.1_g282740 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.0e-83 314.3 211 73.0
Aqoxy3G03817 Aquilegia oxysepala HOM05D006650 ORTHO05D008401 5.7e-82 308.5 285 60.4
FAN12G1321 Fragaria x ananassa HOM05D006650 ORTHO05D008401 4.8e-81 305.4 288 62.5
COL.COLO4_27715 Corchorus olitorius HOM05D006650 ORTHO05D008401 6.3e-81 305.1 277 61.4
AL1G39570 Arabidopsis lyrata HOM05D006650 ORTHO05D008401 2.4e-80 303.1 309 56.0
ATR0691G055 Amborella trichopoda HOM05D006650 ORTHO05D008401 3.1e-80 302.8 297 57.9
Cc11_g11090 Coffea canephora HOM05D006650 ORTHO05D008401 3.1e-80 302.8 303 55.4
Actinidia32425 Actinidia chinensis HOM05D006650 ORTHO05D008401 4.1e-80 302.4 221 69.2
Duzib248G0229 Durio zibethinus HOM05D006650 ORTHO05D008401 4.1e-80 302.4 273 61.2
ECA246G1261 Erigeron canadensis HOM05D006650 ORTHO05D008401 2.0e-79 300.1 240 63.8
Carub.0001s2478 Capsella rubella HOM05D006650 ORTHO05D008401 2.6e-79 299.7 306 54.9
Sp1g22480 Schrenkiella parvula HOM05D006650 ORTHO05D008401 5.9e-79 298.5 259 62.2
Os02g0326000 Oryza sativa ssp. japonica HOM05D006650 ORTHO05D008401 7.7e-79 298.1 220 67.7
Sopen05g006230 Solanum pennellii HOM05D006650 ORTHO05D008401 7.7e-79 298.1 305 55.1
CARHR025730 Cardamine hirsuta HOM05D006650 ORTHO05D008401 1.0e-78 297.7 307 56.4
Thhalv10008392m.g Eutrema salsugineum HOM05D006650 ORTHO05D008401 1.3e-78 297.4 307 57.3
PGR119G1187 Punica granatum HOM05D006650 ORTHO05D008401 1.3e-78 297.4 216 67.1
BolC3t19565H Brassica oleracea HOM05D006650 ORTHO05D008401 1.7e-78 297.0 305 55.1
MSTRG.800 Avicennia marina HOM05D006650 ORTHO05D008401 2.2e-78 296.6 293 55.3
Nitab4.5_0000259g0270 Nicotiana tabacum HOM05D006650 ORTHO05D008401 2.2e-78 296.6 308 55.2
Nitab4.5_0008828g0010 Nicotiana tabacum HOM05D006650 ORTHO05D008401 1.4e-77 293.9 308 54.5
CAN.G184.36 Capsicum annuum HOM05D006650 ORTHO05D008401 1.9e-77 293.5 240 62.5
Migut.L01126 Erythranthe guttata HOM05D006650 ORTHO05D008401 7.2e-77 291.6 278 56.1
Potri.008G109700 Populus trichocarpa HOM05D006650 ORTHO05D008401 1.2e-76 290.8 212 70.3
PSO063G6309 Papaver somniferum HOM05D006650 ORTHO05D008401 2.7e-76 289.7 218 68.8
HanXRQChr15g0475871 Helianthus annuus HOM05D006650 ORTHO05D008401 3.6e-76 289.3 257 59.5
Potri.T046554 Populus trichocarpa HOM05D006650 ORTHO05D008401 7.9e-76 288.1 290 57.6
Zm00001eb379060 Zea mays HOM05D006650 ORTHO05D008401 1.8e-75 287.0 271 58.3
GSVIVG01012028001 Vitis vinifera HOM05D006650 ORTHO05D008401 3.0e-75 286.2 193 74.1
FAN22G1912 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.1e-74 284.3 326 54.0
PSO782G4155 Papaver somniferum HOM05D006650 ORTHO05D008401 2.0e-74 283.5 218 67.9
C03p72670 Brassica napus HOM05D006650 ORTHO05D008401 2.5e-74 283.1 329 51.1
DCAR_023721 Daucus carota HOM05D006650 ORTHO05D008401 2.5e-74 283.1 258 59.7
Sabra08G0083500 Salix brachista HOM05D006650 ORTHO05D008401 1.3e-73 280.8 287 57.1
Thecc.02G315100 Theobroma cacao HOM05D006650 ORTHO05D008401 2.2e-73 280.0 284 57.7
Gohir.A04G144800 Gossypium hirsutum HOM05D006650 ORTHO05D008401 2.8e-73 279.6 307 56.4
Gorai.012G184600 Gossypium raimondii HOM05D006650 ORTHO05D008401 6.9e-72 275.0 307 56.0
unitig_22.g6887 Utricularia gibba HOM05D006650 ORTHO05D008401 4.5e-71 272.3 253 53.8
FvH4_4g28590 Fragaria vesca HOM05D006650 ORTHO05D008401 8.5e-70 268.1 243 63.8
Gohir.D04G189300 Gossypium hirsutum HOM05D006650 ORTHO05D008401 8.5e-70 268.1 307 55.7
Dinv16555 Davidia involucrata HOM05D006650 ORTHO05D008401 4.2e-69 265.8 175 73.1
Oeu054561.2 Olea europaea HOM05D006650 ORTHO05D008401 4.2e-69 265.8 295 51.2
TAR371G0285 Trochodendron aralioides HOM05D006650 ORTHO05D008401 2.7e-68 263.1 269 57.6
Lsat_1_v5_gn_3_61200 Lactuca sativa HOM05D006650 ORTHO05D008401 3.6e-68 262.7 315 51.1
TAR371G1079 Trochodendron aralioides HOM05D006650 ORTHO05D008401 3.6e-68 262.7 269 57.2
vmacro10492 Vaccinium macrocarpon HOM05D006650 ORTHO05D008401 1.8e-67 260.4 342 48.8
Aa31LG7G8830 Aethionema arabicum HOM05D006650 ORTHO05D008401 3.3e-66 256.1 218 61.0
CSS0028658 Camellia sinensis var. sinensis HOM05D006650 ORTHO05D008401 3.3e-66 256.1 189 69.3
SalBow8G0131 Salvia bowleyana HOM05D006650 ORTHO05D008401 2.2e-65 253.4 287 49.8
Pp3c15_17200 Physcomitrium patens HOM05D006650 ORTHO05D008401 3.7e-65 252.7 234 53.8
Sc11g0002870 Simmondsia chinensis HOM05D006650 ORTHO05D008401 3.1e-64 249.6 245 57.6
Mapoly0001s0402 Marchantia polymorpha HOM05D006650 ORTHO05D008401 4.1e-64 249.2 211 58.3
Lj8A100G102 Lonicera japonica HOM05D006650 ORTHO05D008401 9.1e-64 248.1 372 45.4
AagrBONN_evm.TU.Sc2ySwM_228.1783 Anthoceros agrestis HOM05D006650 ORTHO05D008401 1.5e-63 247.3 208 57.7
A08p27180 Brassica napus HOM05D006650 ORTHO05D008401 3.5e-63 246.1 268 54.1
BraA08t34664Z Brassica rapa HOM05D006650 ORTHO05D008401 3.5e-63 246.1 268 54.1
Hma1.2p1_1424F.1_g282730 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 5.9e-63 245.4 287 51.6
Hma1.2p1_1459F.1_g284910 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.0e-62 244.6 287 51.6
Peaxi162Scf00188g00428 Petunia axillaris HOM05D006650 ORTHO05D008401 1.2e-60 237.7 324 46.0
SMO239G0062 Selaginella moellendorffii HOM05D006650 ORTHO05D008401 1.4e-59 234.2 202 55.9
SGA_v2.0_scaffold16G07854 Striga asiatica HOM05D006650 ORTHO05D008401 1.4e-59 234.2 298 48.3
Atru.chr11.1474 Acer truncatum HOM05D006650 ORTHO05D008401 6.7e-59 231.9 175 69.1
DCAR_026698 Daucus carota HOM05D006650 ORTHO05D008401 2.2e-57 226.9 242 54.5
MD16G1057600 Malus domestica HOM05D006650 ORTHO05D008401 1.3e-54 217.6 238 55.5
Ah.02g127370 Amaranthus hybridus HOM05D006650 ORTHO05D008401 3.8e-54 216.1 220 55.5
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 9.7e-50 201.4 149 69.8
AUR62007783 Chenopodium quinoa HOM05D006650 ORTHO05D008401 3.7e-49 199.5 217 53.5
AUR62002977 Chenopodium quinoa HOM05D006650 ORTHO05D008401 6.3e-49 198.7 213 52.1
MBI15_g22709_MAGBIO Magnolia biondii HOM05D006650 ORTHO05D008401 1.4e-48 197.6 136 70.6
CBR_g18672 Chara braunii HOM05D006650 ORTHO05D008401 2.7e-44 183.3 217 44.2
PGSC0003DMG400007519 Solanum tuberosum HOM05D006650 ORTHO05D008401 1.8e-43 180.6 233 49.4
Haze_11820 Corylus avellana HOM05D006650 ORTHO05D008401 2.3e-43 180.3 197 60.4
HPP92_021645 Vanilla planifolia HOM05D006650 ORTHO05D008401 4.0e-43 179.5 275 45.1
AT1G26180 Arabidopsis thaliana HOM05D006650 ORTHO05D008401 2.4e-40 170.2 191 48.2
SalBow8G0120 Salvia bowleyana HOM05D006650 ORTHO05D008401 9.1e-40 168.3 294 39.8
AagrBONN_evm.TU.Sc2ySwM_228.1786 Anthoceros agrestis HOM05D006650 ORTHO05D008401 2.0e-39 167.2 143 55.2
CBR_g25761 Chara braunii HOM05D006650 ORTHO05D008401 2.8e-36 156.8 193 43.5
Nn4g23629 Nelumbo nucifera HOM05D006650 ORTHO05D008401 2.3e-35 153.7 178 54.5
EL10Ac6g14586 Beta vulgaris HOM05D006650 ORTHO05D008401 5.7e-34 149.1 249 43.0
CARHR153660 Cardamine hirsuta HOM05D006650 ORTHO05D008401 2.2e-33 147.1 116 63.8
Cpa.g.sc1.261 Carica papaya HOM05D006650 ORTHO05D008401 4.9e-33 146.0 169 52.7
Hund05792 Selenicereus undatus HOM05D006650 ORTHO05D008401 1.1e-24 118.2 146 50.0
Cre07.g340150 Chlamydomonas reinhardtii HOM05D006650 ORTHO05D008401 1.0e-22 111.7 195 34.9
MCO03G393 Micromonas commoda HOM05D006650 ORTHO05D008401 6.6e-22 109.0 178 34.3
PRCOL_00002951 Prasinoderma coloniale HOM05D006650 ORTHO05D008401 2.0e-18 97.4 192 33.9
TAR629G1747 Trochodendron aralioides HOM05D006650 ORTHO05D000624 6.0e-15 85.9 77 55.8
Peaxi162Scf00004g02825 Petunia axillaris HOM05D006650 ORTHO05D008401 1.3e-14 84.7 69 65.2
Zm00001eb068230 Zea mays HOM05D000001 ORTHO05D000003 4.7e-12 76.3 53 67.9
Sabra10G0102400 Salix brachista HOM05D006650 ORTHO05D008401 1.4e-11 74.7 87 49.4
Eucgr.G02394 Eucalyptus grandis HOM05D006650 ORTHO05D008401 3.9e-06 56.6 117 44.4


User provided reference genes

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