Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0026299 Lotus japonicus HOM05D007430 ORTHO05D009322 3.0e-57 224.9 111 100.0
Lalb_Chr02g0158751 Lupinus albus HOM05D007430 ORTHO05D009322 1.1e-51 206.5 111 88.3
Ca_14394_v3 Cicer arietinum L. HOM05D007430 ORTHO05D009322 4.6e-50 201.1 111 88.3
TPR.G15952 Trifolium pratense HOM05D007430 ORTHO05D009322 1.1e-48 196.4 111 84.7
Medtr6g015965 Medicago truncatula HOM05D007430 ORTHO05D009322 4.3e-48 194.5 111 83.8
Glyma.19G034200 Glycine max HOM05D007430 ORTHO05D009322 6.9e-46 187.2 111 78.4
VMungo0464G1827 Vigna mungo HOM05D007430 ORTHO05D009322 1.3e-44 183.0 111 77.5
arahy.Tifrunner.gnm1.ann1.LXP3AQ Arachis hypogaea HOM05D007430 ORTHO05D009322 2.2e-44 182.2 111 80.2
RcHm_v2.0_Chr2g0164961 Rosa chinensis HOM05D007430 ORTHO05D009322 2.9e-44 181.8 111 74.8
arahy.Tifrunner.gnm1.ann1.T6F203 Arachis hypogaea HOM05D007430 ORTHO05D009322 3.8e-44 181.4 111 80.2
Phvul.004G041900 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 8.4e-44 180.3 111 76.6
FAN14G5598 Fragaria x ananassa HOM05D007430 ORTHO05D009322 1.1e-43 179.9 111 74.8
Phvul.004G042100 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 1.4e-43 179.5 109 77.1
FAN05G2487 Fragaria x ananassa HOM05D007430 ORTHO05D009322 1.2e-42 176.4 111 73.0
Prupe.3G249500 Prunus persica HOM05D007430 ORTHO05D009322 1.6e-42 176.0 109 70.6
FAN09G2572 Fragaria x ananassa HOM05D007430 ORTHO05D009322 1.3e-41 172.9 108 73.1
MD17G1065300 Malus domestica HOM05D007430 ORTHO05D009322 5.1e-41 171.0 109 70.6
Thecc.04G105400 Theobroma cacao HOM05D007430 ORTHO05D009322 9.6e-40 166.8 110 68.2
Sabra17G0085900 Salix brachista HOM05D007430 ORTHO05D009322 6.2e-39 164.1 110 70.0
Duzib138G0563 Durio zibethinus HOM05D007430 ORTHO05D009322 3.1e-38 161.8 110 63.6
QL02p065966 Quercus lobata HOM05D007430 ORTHO05D009322 9.0e-38 160.2 108 69.4
TWI34G0957 Tripterygium wilfordii HOM05D007430 ORTHO05D009322 9.0e-38 160.2 110 69.1
FvH4_6g46430 Fragaria vesca HOM05D007430 ORTHO05D009322 1.3e-36 156.4 99 73.7
Dinv33859 Davidia involucrata HOM05D007430 ORTHO05D009322 2.2e-36 155.6 108 68.5
Eucgr.C00827 Eucalyptus grandis HOM05D007430 ORTHO05D009322 4.9e-36 154.5 109 63.3
Gohir.D07G186800 Gossypium hirsutum HOM05D007430 ORTHO05D009322 4.9e-36 154.5 108 64.8
Gorai.001G207400 Gossypium raimondii HOM05D007430 ORTHO05D009322 4.9e-36 154.5 108 64.8
Potri.017G099600 Populus trichocarpa HOM05D007430 ORTHO05D009322 4.9e-36 154.5 109 65.1
Gohir.A07G179900 Gossypium hirsutum HOM05D007430 ORTHO05D009322 1.1e-35 153.3 108 64.8
GSVIVG01037660001 Vitis vinifera HOM05D007430 ORTHO05D009322 1.1e-35 153.3 109 63.3
Manes.02G059000 Manihot esculenta HOM05D007430 ORTHO05D009322 1.9e-35 152.5 110 64.5
Atru.chr8.658 Acer truncatum HOM05D007430 ORTHO05D009322 2.4e-35 152.1 105 65.7
Sed0003360 Sechium edule HOM05D007430 ORTHO05D009322 2.4e-35 152.1 107 64.5
CiPaw.03G083500 Carya illinoinensis HOM05D007430 ORTHO05D009322 7.1e-35 150.6 111 63.1
CsaV3_4G010120 Cucumis sativus L. HOM05D007430 ORTHO05D009322 7.1e-35 150.6 107 63.6
Ciclev10013162m.g Citrus clementina HOM05D007430 ORTHO05D009322 1.6e-34 149.4 108 60.2
TAR371G1216 Trochodendron aralioides HOM05D007430 ORTHO05D009322 2.7e-34 148.7 109 63.3
ClCG07G016000 Citrullus lanatus HOM05D007430 ORTHO05D009322 6.0e-34 147.5 107 60.7
MELO3C032688.2 Cucumis melo HOM05D007430 ORTHO05D009322 1.0e-33 146.7 108 63.0
PGR004G1880 Punica granatum HOM05D007430 ORTHO05D009322 2.3e-33 145.6 108 61.1
TAR629G2042 Trochodendron aralioides HOM05D007430 ORTHO05D009322 3.9e-33 144.8 108 58.3
CANSAT64G0392 Cannabis sativa HOM05D007430 ORTHO05D009322 8.7e-33 143.7 109 64.2
PSO478G2979 Papaver somniferum HOM05D007430 ORTHO05D009322 8.7e-33 143.7 108 57.4
Nn8g40106 Nelumbo nucifera HOM05D007430 ORTHO05D009322 1.1e-32 143.3 110 60.9
Aqoxy3G00539 Aquilegia oxysepala HOM05D007430 ORTHO05D009322 1.5e-32 142.9 109 61.5
EL10Ac8g20552 Beta vulgaris HOM05D007430 ORTHO05D009322 1.9e-32 142.5 108 63.9
Cpa.g.sc14.221 Carica papaya HOM05D007430 ORTHO05D009322 1.9e-32 142.5 109 62.4
PSO017G6770 Papaver somniferum HOM05D007430 ORTHO05D009322 2.5e-32 142.1 108 58.3
AUR62023164 Chenopodium quinoa HOM05D007430 ORTHO05D009322 9.6e-32 140.2 108 64.8
Hma1.2p1_1502F.1_g287440 Hydrangea macrophylla HOM05D007430 ORTHO05D009322 1.3e-31 139.8 109 59.6
MBI16_g22331_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 1.3e-31 139.8 110 61.8
Hund13678 Selenicereus undatus HOM05D007430 ORTHO05D009322 2.1e-31 139.0 110 62.7
Os03g0414400 Oryza sativa ssp. japonica HOM05D007430 ORTHO05D009322 2.8e-31 138.7 110 54.5
CSS0032789 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 6.2e-31 137.5 110 60.0
CSS0049466 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 6.2e-31 137.5 110 60.0
Sc10g0000620 Simmondsia chinensis HOM05D007430 ORTHO05D009322 8.1e-31 137.1 110 56.4
Cc01_g15140 Coffea canephora HOM05D007430 ORTHO05D009322 1.8e-30 136.0 109 58.7
Aa31LG11G13770 Aethionema arabicum HOM05D007430 ORTHO05D009322 3.1e-30 135.2 109 57.8
AUR62009486 Chenopodium quinoa HOM05D007430 ORTHO05D009322 5.3e-30 134.4 108 60.2
FAN02G0166 Fragaria x ananassa HOM05D007430 ORTHO05D009322 5.3e-30 134.4 99 66.7
ECA238G2295 Erigeron canadensis HOM05D007430 ORTHO05D009322 9.0e-30 133.7 110 54.5
Actinidia36267 Actinidia chinensis HOM05D007430 ORTHO05D009322 2.6e-29 132.1 109 58.7
HanXRQChr14g0452451 Helianthus annuus HOM05D007430 ORTHO05D009322 2.6e-29 132.1 110 57.3
THA.LOC104820974 Tarenaya hassleriana HOM05D007430 ORTHO05D009322 3.4e-29 131.7 111 57.7
DCAR_003124 Daucus carota HOM05D007430 ORTHO05D009322 9.9e-29 130.2 108 54.6
Oeu007080.1 Olea europaea HOM05D007430 ORTHO05D009322 9.9e-29 130.2 113 54.0
Lsat_1_v5_gn_2_89680 Lactuca sativa HOM05D007430 ORTHO05D009322 2.9e-28 128.6 111 54.1
vmacro05615 Vaccinium macrocarpon HOM05D007430 ORTHO05D009322 4.9e-28 127.9 109 56.0
MSTRG.3403 Avicennia marina HOM05D007430 ORTHO05D009322 6.4e-28 127.5 107 57.9
AL6G26650 Arabidopsis lyrata HOM05D007430 ORTHO05D009322 8.4e-28 127.1 109 53.2
AT5G15802 Arabidopsis thaliana HOM05D007430 ORTHO05D009322 8.4e-28 127.1 109 53.2
SGA_v2.0_scaffold148G36438 Striga asiatica HOM05D007430 ORTHO05D009322 2.4e-27 125.6 109 56.0
CARHR197520 Cardamine hirsuta HOM05D007430 ORTHO05D009322 3.2e-27 125.2 109 52.3
PGSC0003DMG400006148 Solanum tuberosum HOM05D007430 ORTHO05D009322 3.2e-27 125.2 109 57.8
CAN.G854.12 Capsicum annuum HOM05D007430 ORTHO05D009322 4.2e-27 124.8 109 57.8
Sopen07g024280 Solanum pennellii HOM05D007430 ORTHO05D009322 4.2e-27 124.8 109 57.8
Duzib133G1191 Durio zibethinus HOM05D007430 ORTHO05D009322 5.5e-27 124.4 85 64.7
Migut.O00383 Erythranthe guttata HOM05D007430 ORTHO05D009322 9.3e-27 123.6 113 53.1
ATR0559G319 Amborella trichopoda HOM05D007430 ORTHO05D009322 7.9e-26 120.6 109 56.0
C09p61270 Brassica napus HOM05D007430 ORTHO05D009322 2.3e-25 119.0 109 48.6
Solyc07g047840.2 Solanum lycopersicum HOM05D007430 ORTHO05D009322 2.3e-25 119.0 109 56.0
Thhalv10015108m.g Eutrema salsugineum HOM05D007430 ORTHO05D009322 3.0e-25 118.6 110 50.0
HPP92_007986 Vanilla planifolia HOM05D007430 ORTHO05D009322 3.0e-25 118.6 102 54.9
Psat1g066840 Pisum sativum HOM05D007430 ORTHO05D009322 5.1e-25 117.9 73 78.1
BcaC04g18935 Brassica carinata HOM05D007430 ORTHO05D009322 6.7e-25 117.5 109 47.7
A10p23220 Brassica napus HOM05D007430 ORTHO05D009322 6.7e-25 117.5 109 47.7
BolC9t58969H Brassica oleracea HOM05D007430 ORTHO05D009322 6.7e-25 117.5 109 47.7
BraA10t44390Z Brassica rapa HOM05D007430 ORTHO05D009322 6.7e-25 117.5 109 47.7
SalBow1G0910 Salvia bowleyana HOM05D000293 ORTHO05D000180 6.7e-25 117.5 105 54.3
MD09G1073800 Malus domestica HOM05D007430 ORTHO05D009322 4.3e-24 114.8 70 78.6
Duzib138G1572 Durio zibethinus HOM05D007430 ORTHO05D009322 1.3e-23 113.2 120 47.5
Carub.0006s1396 Capsella rubella HOM05D007430 ORTHO05D009322 2.8e-23 112.1 109 47.7
CDE09G0787 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 3.7e-23 111.7 110 56.4
Sp6g28310 Schrenkiella parvula HOM05D007430 ORTHO05D009322 4.0e-22 108.2 109 46.8
unitig_32.g10757 Utricularia gibba HOM05D000600 ORTHO05D000432 1.3e-20 103.2 109 47.7
MBI16_g39931_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 1.7e-20 102.8 110 50.0
CDE02G4259 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 8.4e-20 100.5 60 80.0
Nitab4.5_0000441g0090 Nicotiana tabacum HOM05D007430 ORTHO05D009322 1.6e-18 96.3 65 69.2
Nitab4.5_0009877g0030 Nicotiana tabacum HOM05D007430 ORTHO05D009322 2.1e-18 95.9 65 69.2
SEGI_38988 Sequoiadendron giganteum HOM05D007430 ORTHO05D009322 3.0e-17 92.0 107 43.9
Pp3c7_870 Physcomitrium patens HOM05D007430 ORTHO05D009322 4.8e-15 84.7 107 36.4
Mapoly0015s0072 Marchantia polymorpha HOM05D007430 ORTHO05D009322 1.8e-14 82.8 112 41.1
AagrBONN_evm.TU.Sc2ySwM_228.315 Anthoceros agrestis HOM05D007430 ORTHO05D009322 6.9e-14 80.9 110 39.1
VMungo1080G1538 Vigna mungo HOM05D000002 ORTHO05D000001 2.7e-10 68.9 48 62.5
COL.COLO4_08471 Corchorus olitorius HOM05D007430 ORTHO05D009322 2.2e-07 59.3 37 78.4
CBR_g37835 Chara braunii HOM05D007430 ORTHO05D009322 6.3e-07 57.8 67 40.3


User provided reference genes

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