Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0026207 Lotus japonicus HOM05D006058 ORTHO05D007686 7.9e-76 287.0 138 100.0
Psat4g228760 Pisum sativum HOM05D006058 ORTHO05D007686 7.4e-66 253.8 135 88.9
Ca_03230_v3 Cicer arietinum L. HOM05D006058 ORTHO05D007686 6.9e-64 247.3 135 87.4
Glyma.01G089000 Glycine max HOM05D006058 ORTHO05D007686 1.5e-63 246.1 135 83.0
Glyma.04G146600 Glycine max HOM05D006058 ORTHO05D007686 1.5e-63 246.1 135 83.0
TPR.G16722 Trifolium pratense HOM05D006058 ORTHO05D007686 4.5e-63 244.6 135 85.9
TPR.G8807 Trifolium pratense HOM05D006058 ORTHO05D007686 7.7e-63 243.8 135 84.4
TPR.G22635 Trifolium pratense HOM05D006058 ORTHO05D007686 7.2e-61 237.3 135 83.0
Medtr3g010210 Medicago truncatula HOM05D006058 ORTHO05D007686 2.1e-60 235.7 135 81.5
Lalb_Chr07g0187491 Lupinus albus HOM05D006058 ORTHO05D007686 1.8e-59 232.6 138 79.0
Phvul.002G050500 Phaseolus vulgaris HOM05D006058 ORTHO05D007686 6.7e-59 230.7 138 79.0
RcHm_v2.0_Chr6g0292311 Rosa chinensis HOM05D006058 ORTHO05D007686 1.5e-58 229.6 135 77.0
Oeu032852.1 Olea europaea HOM05D006058 ORTHO05D007686 4.4e-58 228.0 132 79.5
CSS0022820 Camellia sinensis var. sinensis HOM05D006058 ORTHO05D007686 2.2e-57 225.7 135 77.0
vmacro02518 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 3.7e-57 224.9 135 77.8
Sc26g0003460 Simmondsia chinensis HOM05D006058 ORTHO05D007686 6.3e-57 224.2 135 75.6
Hma1.2p1_0399F.1_g144340 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 1.8e-56 222.6 135 75.6
Hma1.2p1_1049F.1_g251900 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 1.8e-56 222.6 135 75.6
FAN27G3183 Fragaria x ananassa HOM05D006058 ORTHO05D007686 2.4e-56 222.2 136 74.3
Duzib211G0114 Durio zibethinus HOM05D006058 ORTHO05D007686 3.1e-56 221.9 138 72.5
FvH4_2g24470 Fragaria vesca HOM05D006058 ORTHO05D007686 3.1e-56 221.9 135 74.8
Prupe.8G268000 Prunus persica HOM05D006058 ORTHO05D007686 3.1e-56 221.9 138 75.4
FAN24G0575 Fragaria x ananassa HOM05D006058 ORTHO05D007686 1.2e-55 219.9 135 74.1
MD04G1200100 Malus domestica HOM05D006058 ORTHO05D007686 1.5e-55 219.5 141 73.0
Manes.07G087200 Manihot esculenta HOM05D006058 ORTHO05D007686 2.6e-55 218.8 135 75.6
AUR62036672 Chenopodium quinoa HOM05D006058 ORTHO05D007686 3.5e-55 218.4 135 77.0
Peaxi162Scf00273g00034 Petunia axillaris HOM05D006058 ORTHO05D007686 4.5e-55 218.0 135 75.6
TAR636G0052 Trochodendron aralioides HOM05D006058 ORTHO05D007686 4.5e-55 218.0 138 76.1
MD12G1212600 Malus domestica HOM05D006058 ORTHO05D007686 7.7e-55 217.2 141 73.8
CANSAT25G3509 Cannabis sativa HOM05D006058 ORTHO05D007686 1.0e-54 216.9 134 73.9
Nn4g26080 Nelumbo nucifera HOM05D006058 ORTHO05D007686 1.0e-54 216.9 138 73.2
MELO3C015303.2 Cucumis melo HOM05D006058 ORTHO05D007686 1.3e-54 216.5 136 75.7
CsaV3_1G038790 Cucumis sativus L. HOM05D006058 ORTHO05D007686 1.3e-54 216.5 136 75.7
Nitab4.5_0001499g0140 Nicotiana tabacum HOM05D006058 ORTHO05D007686 1.3e-54 216.5 132 76.5
Aqoxy4G03219 Aquilegia oxysepala HOM05D006058 ORTHO05D007686 1.7e-54 216.1 138 72.5
Thecc.01G288100 Theobroma cacao HOM05D006058 ORTHO05D007686 1.7e-54 216.1 138 71.0
Nitab4.5_0009592g0010 Nicotiana tabacum HOM05D006058 ORTHO05D007686 2.9e-54 215.3 132 75.0
PGR119G2453 Punica granatum HOM05D006058 ORTHO05D007686 2.9e-54 215.3 136 73.5
Eucgr.H01614 Eucalyptus grandis HOM05D006058 ORTHO05D007686 5.0e-54 214.5 135 72.6
GSVIVG01011025001 Vitis vinifera HOM05D006058 ORTHO05D007686 5.0e-54 214.5 138 71.0
vmacro04594 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 1.5e-53 213.0 131 75.6
TWI23G1093 Tripterygium wilfordii HOM05D006058 ORTHO05D007686 1.9e-53 212.6 136 72.1
Hund02088 Selenicereus undatus HOM05D006058 ORTHO05D007686 4.2e-53 211.5 135 71.1
Peaxi162Scf00026g00313 Petunia axillaris HOM05D006058 ORTHO05D007686 5.5e-53 211.1 132 74.2
Potri.014G083500 Populus trichocarpa HOM05D006058 ORTHO05D007686 7.2e-53 210.7 139 71.2
Ah.10g033440 Amaranthus hybridus HOM05D006058 ORTHO05D007686 9.4e-53 210.3 135 71.9
COL.COLO4_08051 Corchorus olitorius HOM05D006058 ORTHO05D007686 9.4e-53 210.3 138 71.0
Nitab4.5_0004672g0030 Nicotiana tabacum HOM05D006058 ORTHO05D007686 1.6e-52 209.5 132 72.7
Gohir.D12G007100 Gossypium hirsutum HOM05D006058 ORTHO05D007686 3.6e-52 208.4 138 67.4
Sabra02G0198900 Salix brachista HOM05D006058 ORTHO05D007686 6.1e-52 207.6 139 71.2
Gohir.A12G007700 Gossypium hirsutum HOM05D006058 ORTHO05D007686 8.0e-52 207.2 138 67.4
SGA_v2.0_scaffold130G34295 Striga asiatica HOM05D006058 ORTHO05D007686 8.0e-52 207.2 133 72.2
Cfa006057 Carpinus fangiana HOM05D006058 ORTHO05D007686 2.3e-51 205.7 138 72.5
Cc01_g20070 Coffea canephora HOM05D006058 ORTHO05D007686 2.3e-51 205.7 138 70.3
Gorai.008G007300 Gossypium raimondii HOM05D006058 ORTHO05D007686 2.3e-51 205.7 135 67.4
DCAR_018372 Daucus carota HOM05D006058 ORTHO05D007686 3.9e-51 204.9 136 69.1
arahy.Tifrunner.gnm1.ann1.SHER6S Arachis hypogaea HOM05D006058 ORTHO05D007686 5.2e-51 204.5 117 82.1
MBI07_g41269_MAGBIO Magnolia biondii HOM05D006058 ORTHO05D007686 6.7e-51 204.1 138 69.6
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 6.7e-51 204.1 118 78.8
Ciclev10022776m.g Citrus clementina HOM05D006058 ORTHO05D007686 8.8e-51 203.8 140 71.4
CiPaw.07G098200 Carya illinoinensis HOM05D006058 ORTHO05D007686 1.1e-50 203.4 138 71.7
arahy.Tifrunner.gnm1.ann1.Y2QWLJ Arachis hypogaea HOM05D006058 ORTHO05D007686 2.0e-50 202.6 117 81.2
unitig_0.g1187 Utricularia gibba HOM05D006058 ORTHO05D007686 2.0e-50 202.6 132 68.2
CDE02G3716 Ceratophyllum demersum HOM05D006058 ORTHO05D007686 2.6e-50 202.2 135 68.9
Prupe.3G123100 Prunus persica HOM05D006058 ORTHO05D007686 4.4e-50 201.4 138 71.0
Actinidia00707 Actinidia chinensis HOM05D006058 ORTHO05D007686 5.7e-50 201.1 118 78.0
VMungo1215G3318 Vigna mungo HOM05D006058 ORTHO05D007686 7.4e-50 200.7 116 81.9
HanXRQChr03g0093951 Helianthus annuus HOM05D006058 ORTHO05D007686 1.3e-49 199.9 134 69.4
Atru.chr5.1299 Acer truncatum HOM05D006058 ORTHO05D007686 2.2e-49 199.1 137 67.9
SalBow3G0902 Salvia bowleyana HOM05D006058 ORTHO05D007686 3.7e-49 198.4 132 67.4
AT5G63690 Arabidopsis thaliana HOM05D006058 ORTHO05D007686 1.1e-48 196.8 138 67.4
Lju470C11T9 Lonicera japonica HOM05D006058 ORTHO05D007686 1.4e-48 196.4 138 67.4
A06p30300 Brassica napus HOM05D006058 ORTHO05D007686 1.8e-48 196.1 138 67.4
BcaC01g02630 Brassica carinata HOM05D006058 ORTHO05D007686 2.4e-48 195.7 138 67.4
C03p62750 Brassica napus HOM05D006058 ORTHO05D007686 2.4e-48 195.7 138 67.4
QL12p042454 Quercus lobata HOM05D006058 ORTHO05D007686 2.4e-48 195.7 137 69.3
BraA06t25979Z Brassica rapa HOM05D006058 ORTHO05D007686 3.1e-48 195.3 138 67.4
Hund29081 Selenicereus undatus HOM05D006058 ORTHO05D007686 3.1e-48 195.3 127 69.3
Hund29083 Selenicereus undatus HOM05D006058 ORTHO05D007686 3.1e-48 195.3 127 69.3
PSO407G0089 Papaver somniferum HOM05D006058 ORTHO05D007686 4.1e-48 194.9 138 68.1
BolC3t18529H Brassica oleracea HOM05D006058 ORTHO05D007686 7.0e-48 194.1 138 66.7
Thhalv10005102m.g Eutrema salsugineum HOM05D006058 ORTHO05D007686 1.2e-47 193.4 138 67.4
HanXRQChr15g0476421 Helianthus annuus HOM05D006058 ORTHO05D007686 1.2e-47 193.4 138 66.7
PSO170G2912 Papaver somniferum HOM05D006058 ORTHO05D007686 1.2e-47 193.4 138 66.7
PGSC0003DMG400015370 Solanum tuberosum HOM05D006058 ORTHO05D007686 1.6e-47 193.0 124 75.0
Solyc12g014020.2 Solanum lycopersicum HOM05D006058 ORTHO05D007686 5.9e-47 191.0 124 74.2
Sopen12g005770 Solanum pennellii HOM05D006058 ORTHO05D007686 5.9e-47 191.0 124 74.2
CARHR277600 Cardamine hirsuta HOM05D006058 ORTHO05D007686 7.7e-47 190.7 135 68.1
Prupe.8G250400 Prunus persica HOM05D006058 ORTHO05D007686 1.0e-46 190.3 106 80.2
HPP92_016068 Vanilla planifolia HOM05D006058 ORTHO05D007686 1.0e-46 190.3 136 63.2
AL8G40840 Arabidopsis lyrata HOM05D006058 ORTHO05D007686 2.2e-46 189.1 138 66.7
BcaB02g09737 Brassica carinata HOM05D006058 ORTHO05D007686 2.2e-46 189.1 140 65.7
BcaC03g18221 Brassica carinata HOM05D006058 ORTHO05D007686 2.9e-46 188.7 139 66.2
Carub.0008s2446 Capsella rubella HOM05D006058 ORTHO05D007686 2.9e-46 188.7 139 64.7
Aa31LG10G11090 Aethionema arabicum HOM05D006058 ORTHO05D007686 1.1e-45 186.8 136 66.2
BolC2t12363H Brassica oleracea HOM05D006058 ORTHO05D007686 1.5e-45 186.4 139 65.5
THA.LOC104826323 Tarenaya hassleriana HOM05D006058 ORTHO05D007686 1.5e-45 186.4 135 66.7
Sp2g26790 Schrenkiella parvula HOM05D006058 ORTHO05D007686 1.9e-45 186.0 140 64.3
A02p42950 Brassica napus HOM05D006058 ORTHO05D007686 1.2e-44 183.3 139 64.7
BcaB07g29701 Brassica carinata HOM05D006058 ORTHO05D007686 2.1e-44 182.6 139 64.7
C02p62900 Brassica napus HOM05D006058 ORTHO05D007686 2.7e-44 182.2 140 63.6
EL10Ac7g17168 Beta vulgaris HOM05D006058 ORTHO05D007686 8.0e-44 180.6 135 64.4
ClCG03G017360 Citrullus lanatus HOM05D006058 ORTHO05D007686 8.0e-44 180.6 111 75.7
Manes.10G061700 Manihot esculenta HOM05D006058 ORTHO05D007686 1.5e-42 176.4 128 65.6
SHI14488 Sapria himalayana HOM05D006058 ORTHO05D007686 1.5e-42 176.4 139 61.9
BraA02t09218Z Brassica rapa HOM05D006058 ORTHO05D007686 4.4e-42 174.9 134 63.4
SEGI_21939 Sequoiadendron giganteum HOM05D006058 ORTHO05D007686 1.3e-41 173.3 139 59.0
Migut.D00240 Erythranthe guttata HOM05D006058 ORTHO05D007686 1.4e-40 169.9 138 59.4
Nn3g21231 Nelumbo nucifera HOM05D006058 ORTHO05D007686 1.8e-40 169.5 116 69.0
Sed0020474 Sechium edule HOM05D006058 ORTHO05D007686 1.6e-39 166.4 108 70.4
ECA240G0292 Erigeron canadensis HOM05D006058 ORTHO05D007686 2.0e-39 166.0 122 66.4
Zm00001eb106990 Zea mays HOM05D006058 ORTHO05D007686 3.5e-39 165.2 139 58.3
Eucgr.H01617 Eucalyptus grandis HOM05D006058 ORTHO05D007686 6.5e-38 161.0 135 57.8
CAN.G964.10 Capsicum annuum HOM05D006058 ORTHO05D007686 3.2e-37 158.7 134 59.7
AUR62034597 Chenopodium quinoa HOM05D006058 ORTHO05D007686 2.6e-34 149.1 95 74.7
Mapoly0122s0023 Marchantia polymorpha HOM05D006058 ORTHO05D007686 3.7e-33 145.2 120 56.7
EL10Ac3g06921 Beta vulgaris HOM05D006058 ORTHO05D007686 4.9e-33 144.8 92 73.9
ATR0225G019 Amborella trichopoda HOM05D006058 ORTHO05D007686 4.1e-32 141.7 109 62.4
Mapoly0068s0046 Marchantia polymorpha HOM05D006058 ORTHO05D007686 7.0e-32 141.0 116 54.3
AagrBONN_evm.TU.Sc2ySwM_369.269 Anthoceros agrestis HOM05D006058 ORTHO05D007686 9.1e-32 140.6 125 51.2
CBR_g26410 Chara braunii HOM05D006058 ORTHO05D007686 9.1e-32 140.6 117 58.1
Pp3c3_34830 Physcomitrium patens HOM05D006058 ORTHO05D007686 1.2e-31 140.2 119 55.5
BolC4t22707H Brassica oleracea HOM05D006058 ORTHO05D007686 2.0e-31 139.4 108 62.0
SMO244G0033 Selaginella moellendorffii HOM05D006058 ORTHO05D007686 3.5e-31 138.7 122 53.3
Sc05g0004330 Simmondsia chinensis HOM05D006058 ORTHO05D007686 2.5e-29 132.5 86 72.1
TAR365G0318 Trochodendron aralioides HOM05D006058 ORTHO05D007686 1.2e-28 130.2 82 68.3
Aa31LG1G18150 Aethionema arabicum HOM05D000706 ORTHO05D001554 8.9e-27 124.0 84 69.0
CBR_g24266 Chara braunii HOM05D006058 ORTHO05D007686 8.3e-25 117.5 119 47.1
MBI07_g41268_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 3.3e-21 105.5 90 54.4
QL12p023442 Quercus lobata HOM05D006058 ORTHO05D007686 6.0e-15 84.7 87 54.0
vmacro09159 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 3.3e-13 79.0 72 54.2
CAN.G27.69 Capsicum annuum HOM05D005779 ORTHO05D007040 1.3e-06 57.0 76 40.8


User provided reference genes

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