Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0025982 Lotus japonicus HOM05D002617 ORTHO05D006076 5.3e-295 1016.9 502 100.0
Glyma.13G047700 Glycine max HOM05D002617 ORTHO05D006076 5.4e-199 698.0 442 80.3
arahy.Tifrunner.gnm1.ann1.B4TVCG Arachis hypogaea HOM05D002617 ORTHO05D006076 1.5e-185 653.3 543 64.8
Glyma.19G040800 Glycine max HOM05D002617 ORTHO05D006076 2.6e-185 652.5 518 68.5
VMungo0540G1549 Vigna mungo HOM05D002617 ORTHO05D006076 1.1e-183 647.1 505 68.1
Lalb_Chr02g0158361 Lupinus albus HOM05D002617 ORTHO05D006076 2.4e-183 646.0 512 68.0
arahy.Tifrunner.gnm1.ann1.LH188B Arachis hypogaea HOM05D002617 ORTHO05D006076 6.0e-182 641.3 543 64.8
Phvul.L003037 Phaseolus vulgaris HOM05D002617 ORTHO05D006076 8.1e-179 630.9 512 67.2
Lalb_Chr21g0317971 Lupinus albus HOM05D002617 ORTHO05D006076 4.5e-177 625.2 488 67.8
Ca_26958_v3 Cicer arietinum L. HOM05D002617 ORTHO05D006076 1.0e-173 614.0 536 64.9
Medtr6g016990 Medicago truncatula HOM05D002617 ORTHO05D006076 1.6e-163 580.1 545 60.0
Psat0s1160g0440 Pisum sativum HOM05D002617 ORTHO05D006076 3.2e-159 565.8 476 66.0
MD17G1073100 Malus domestica HOM05D002617 ORTHO05D006076 1.1e-143 514.2 452 63.1
MD09G1082600 Malus domestica HOM05D002617 ORTHO05D006076 1.6e-142 510.4 451 61.9
Prupe.3G241000 Prunus persica HOM05D002617 ORTHO05D006076 3.0e-141 506.1 435 64.6
CiPaw.03G005500 Carya illinoinensis HOM05D002617 ORTHO05D006076 7.4e-140 501.5 507 57.0
Cfa007960 Carpinus fangiana HOM05D002617 ORTHO05D009035 1.8e-138 496.9 451 61.4
TAR629G1560 Trochodendron aralioides HOM05D002617 ORTHO05D006076 7.0e-138 495.0 486 57.6
QL02p053118 Quercus lobata HOM05D002617 ORTHO05D006076 2.2e-136 490.0 439 60.1
RcHm_v2.0_Chr2g0163421 Rosa chinensis HOM05D002617 ORTHO05D006076 3.0e-133 479.6 486 57.4
TPR.G9686 Trifolium pratense HOM05D002617 ORTHO05D006076 4.4e-132 475.7 408 64.7
CANSAT64G0391 Cannabis sativa HOM05D002617 ORTHO05D006076 1.3e-131 474.2 523 54.9
Dinv34860 Davidia involucrata HOM05D002617 ORTHO05D006076 3.7e-131 472.6 440 60.0
Cpa.g.sc179.38 Carica papaya HOM05D002617 ORTHO05D006076 2.4e-130 469.9 533 53.1
Manes.02G066000 Manihot esculenta HOM05D002617 ORTHO05D006076 4.1e-130 469.2 455 58.5
Hma1.2p1_0550F.1_g177160 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 1.6e-129 467.2 462 59.1
Actinidia10244 Actinidia chinensis HOM05D002617 ORTHO05D006076 1.0e-128 464.5 512 55.5
Haze_14109 Corylus avellana HOM05D002617 ORTHO05D006076 3.8e-128 462.6 534 52.2
Potri.017G111300 Populus trichocarpa HOM05D002617 ORTHO05D006076 1.1e-127 461.1 449 58.1
Atru.chr8.797 Acer truncatum HOM05D002617 ORTHO05D006076 1.5e-127 460.7 445 60.4
TWI74G0354 Tripterygium wilfordii HOM05D002617 ORTHO05D006076 2.5e-127 459.9 450 58.7
Ciclev10013582m.g Citrus clementina HOM05D002617 ORTHO05D009035 3.2e-127 459.5 445 59.1
Cc07_g05010 Coffea canephora HOM05D002617 ORTHO05D006076 5.5e-127 458.8 452 56.4
COL.COLO4_16207 Corchorus olitorius HOM05D002617 ORTHO05D006076 2.1e-126 456.8 451 56.5
Duzib177G0627 Durio zibethinus HOM05D002617 ORTHO05D006076 3.6e-126 456.1 465 57.0
FAN14G4630 Fragaria x ananassa HOM05D002617 ORTHO05D006076 4.7e-126 455.7 445 58.9
Sabra04G0077200 Salix brachista HOM05D002617 ORTHO05D006076 8.0e-126 454.9 449 56.8
Thecc.04G140400 Theobroma cacao HOM05D002617 ORTHO05D006076 8.0e-126 454.9 466 55.6
FvH4_6g45480 Fragaria vesca HOM05D002617 ORTHO05D006076 1.0e-125 454.5 445 58.9
GSVIVG01036455001 Vitis vinifera HOM05D002617 ORTHO05D009035 4.0e-125 452.6 417 61.6
FAN02G4200 Fragaria x ananassa HOM05D002617 ORTHO05D006076 6.7e-125 451.8 479 55.7
Duzib235G0774 Durio zibethinus HOM05D002617 ORTHO05D006076 4.4e-124 449.1 534 50.4
Sabra17G0092600 Salix brachista HOM05D002617 ORTHO05D006076 1.3e-123 447.6 493 53.1
Nitab4.5_0003461g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 8.2e-123 444.9 470 53.8
Peaxi162Scf00479g00121 Petunia axillaris HOM05D002617 ORTHO05D006076 1.1e-122 444.5 388 60.6
TAR371G0417 Trochodendron aralioides HOM05D002617 ORTHO05D006076 1.6e-121 440.7 417 59.5
Potri.004G104400 Populus trichocarpa HOM05D002617 ORTHO05D006076 5.9e-121 438.7 450 56.0
Actinidia19593 Actinidia chinensis HOM05D002617 ORTHO05D006076 8.5e-120 434.9 403 60.0
Sopen03g009500 Solanum pennellii HOM05D002617 ORTHO05D000002 1.9e-119 433.7 388 58.5
HanXRQChr14g0439661 Helianthus annuus HOM05D002617 ORTHO05D006076 7.2e-119 431.8 455 55.6
Lj4A130T19 Lonicera japonica HOM05D002617 ORTHO05D006076 1.6e-118 430.6 462 56.1
Solyc03g045060.3 Solanum lycopersicum HOM05D002617 ORTHO05D006076 3.6e-118 429.5 355 61.4
ClCG11G005280 Citrullus lanatus HOM05D002617 ORTHO05D006076 6.1e-118 428.7 402 58.2
Haze_14111 Corylus avellana HOM05D002617 ORTHO05D006076 1.4e-117 427.6 402 60.9
DCAR_026269 Daucus carota HOM05D002617 ORTHO05D006076 1.4e-117 427.6 463 53.1
Eucgr.J01460 Eucalyptus grandis HOM05D002617 ORTHO05D006076 2.3e-117 426.8 491 54.0
MELO3C022066.2 Cucumis melo HOM05D002617 ORTHO05D006076 5.2e-117 425.6 411 57.4
CsaV3_5G039050 Cucumis sativus L. HOM05D002617 ORTHO05D006076 3.4e-116 422.9 411 57.4
Oeu032874.2 Olea europaea HOM05D002617 ORTHO05D006076 4.4e-116 422.5 482 52.1
MSTRG.23826 Avicennia marina HOM05D002617 ORTHO05D006076 9.8e-116 421.4 395 57.7
Nitab4.5_0004487g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 1.3e-115 421.0 436 54.4
Sed0011770 Sechium edule HOM05D002617 ORTHO05D006076 2.2e-115 420.2 420 55.5
CAN.G153.18 Capsicum annuum HOM05D002617 ORTHO05D006076 3.1e-114 416.4 467 51.6
Aqoxy3G00424 Aquilegia oxysepala HOM05D002617 ORTHO05D006076 9.1e-114 414.8 492 50.6
Sc12g0007600 Simmondsia chinensis HOM05D002617 ORTHO05D006076 2.0e-113 413.7 403 56.6
Hma1.2p1_0136F.1_g062020 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 3.5e-113 412.9 472 53.4
ECA232G1923 Erigeron canadensis HOM05D002617 ORTHO05D006076 1.3e-112 411.0 496 50.2
Rhsim07G0215800 Rhododendron simsii HOM05D002617 ORTHO05D006076 2.9e-112 409.8 457 55.1
Gohir.A13G161700 Gossypium hirsutum HOM05D002617 ORTHO05D006076 2.5e-111 406.8 453 52.8
Gohir.D13G172300 Gossypium hirsutum HOM05D002617 ORTHO05D006076 3.6e-110 402.9 453 52.8
Gorai.013G188400 Gossypium raimondii HOM05D002617 ORTHO05D006076 3.6e-110 402.9 453 52.8
Migut.H00535 Erythranthe guttata HOM05D002617 ORTHO05D009035 1.2e-108 397.9 529 47.3
PGR042G0381 Punica granatum HOM05D002617 ORTHO05D006076 8.3e-107 391.7 450 52.7
HanXRQChr15g0489371 Helianthus annuus HOM05D002617 ORTHO05D006076 1.6e-105 387.5 388 55.2
EL10Ac5g11460 Beta vulgaris HOM05D002617 ORTHO05D006076 1.9e-103 380.6 413 53.8
THA.LOC104822697 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 4.3e-103 379.4 418 52.2
Aa31LG9G16990 Aethionema arabicum HOM05D002617 ORTHO05D006076 1.2e-102 377.9 444 52.7
AUR62029876 Chenopodium quinoa HOM05D002617 ORTHO05D006076 2.3e-101 373.6 435 50.1
GSVIVG01011977001 Vitis vinifera HOM05D002617 ORTHO05D006076 2.3e-101 373.6 331 60.7
THA.LOC104805556 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 3.1e-101 373.2 371 55.0
Lsat_1_v5_gn_4_175880 Lactuca sativa HOM05D002617 ORTHO05D006076 5.2e-101 372.5 515 46.8
PSO017G2525 Papaver somniferum HOM05D002617 ORTHO05D006076 9.8e-100 368.2 342 56.7
Oeu043861.1 Olea europaea HOM05D002617 ORTHO05D006076 2.2e-99 367.1 434 47.2
PSO478G3319 Papaver somniferum HOM05D002617 ORTHO05D006076 4.9e-99 365.9 338 56.5
Thhalv10027714m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 1.9e-98 364.0 402 52.0
ATR0598G067 Amborella trichopoda HOM05D002617 ORTHO05D006076 3.2e-98 363.2 440 48.4
AUR62025837 Chenopodium quinoa HOM05D002617 ORTHO05D006076 1.6e-97 360.9 450 47.8
AT5G38600 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 7.8e-97 358.6 380 55.0
Carub.0002s1348 Capsella rubella HOM05D002617 ORTHO05D006076 1.3e-96 357.8 441 48.3
AL2G25720 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 5.0e-96 355.9 417 49.9
BcaB02g08001 Brassica carinata HOM05D002617 ORTHO05D006076 5.0e-96 355.9 477 48.0
CARHR059670 Cardamine hirsuta HOM05D002617 ORTHO05D006076 1.1e-95 354.8 316 57.6
Sp7g03340 Schrenkiella parvula HOM05D002617 ORTHO05D006076 1.1e-95 354.8 482 47.1
A07p19790 Brassica napus HOM05D002617 ORTHO05D006076 2.5e-95 353.6 449 49.0
BraA07t29680Z Brassica rapa HOM05D002617 ORTHO05D006076 2.5e-95 353.6 449 49.0
Carub.0007s3725 Capsella rubella HOM05D002617 ORTHO05D006076 2.5e-95 353.6 378 54.5
BolC6t37041H Brassica oleracea HOM05D002617 ORTHO05D006076 7.3e-95 352.1 503 45.3
C06p18260 Brassica napus HOM05D000054 ORTHO05D006076 9.5e-95 351.7 503 45.1
BcaC08g44397 Brassica carinata HOM05D002617 ORTHO05D006076 1.2e-94 351.3 500 45.8
unitig_736.g22255 Utricularia gibba HOM05D002617 ORTHO05D006076 2.1e-94 350.5 342 55.0
AL7G51930 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 4.7e-94 349.4 381 53.5
SGA_v2.0_scaffold204G41654 Striga asiatica HOM05D002617 ORTHO05D006076 3.4e-92 343.2 458 48.5
BcaB05g24247 Brassica carinata HOM05D002617 ORTHO05D006076 4.4e-92 342.8 383 52.7
Aa31LG2G3590 Aethionema arabicum HOM05D002617 ORTHO05D006076 9.8e-92 341.7 373 51.5
Glyma.19G043901 Glycine max HOM05D002617 ORTHO05D006076 9.8e-92 341.7 235 73.6
A02p14070 Brassica napus HOM05D002617 ORTHO05D006076 2.2e-91 340.5 388 51.5
AT1G67210 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 4.9e-91 339.3 354 52.8
CARHR214050 Cardamine hirsuta HOM05D002617 ORTHO05D006076 4.9e-91 339.3 441 48.1
HPP92_011591 Vanilla planifolia HOM05D002617 ORTHO05D006076 4.9e-91 339.3 453 47.2
BraA02t06470Z Brassica rapa HOM05D002617 ORTHO05D006076 3.2e-90 336.7 431 48.0
BcaC03g14816 Brassica carinata HOM05D002617 ORTHO05D006076 1.2e-89 334.7 431 48.0
BolC2t08421H Brassica oleracea HOM05D002617 ORTHO05D006076 1.2e-89 334.7 431 48.0
C02p22680 Brassica napus HOM05D002617 ORTHO05D006076 2.1e-89 334.0 432 48.6
Sp5g22140 Schrenkiella parvula HOM05D002617 ORTHO05D006076 4.6e-89 332.8 382 50.5
EL10Ac6g14526 Beta vulgaris HOM05D002617 ORTHO05D006076 3.6e-86 323.2 386 48.2
FAN05G1346 Fragaria x ananassa HOM05D002617 ORTHO05D006076 1.8e-85 320.9 261 63.6
Sc11g0002970 Simmondsia chinensis HOM05D002617 ORTHO05D006076 1.8e-85 320.9 379 46.2
Zm00001eb182330 Zea mays HOM05D002617 ORTHO05D006076 6.8e-85 318.9 446 47.1
Thhalv10018682m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 8.9e-85 318.5 354 52.5
AUR62007748 Chenopodium quinoa HOM05D002617 ORTHO05D006076 3.9e-80 303.1 385 46.0
Os06g0495700 Oryza sativa ssp. japonica HOM05D002617 ORTHO05D006076 5.1e-80 302.8 397 46.9
Hund05776 Selenicereus undatus HOM05D002617 ORTHO05D006076 6.6e-80 302.4 409 46.5
vmacro04611 Vaccinium macrocarpon HOM05D002617 ORTHO05D006076 1.6e-78 297.7 454 43.8
DCAR_026709 Daucus carota HOM05D002617 ORTHO05D006076 4.0e-77 293.1 403 45.4
AUR62002941 Chenopodium quinoa HOM05D002617 ORTHO05D006076 6.8e-77 292.4 390 44.9
FAN09G0965 Fragaria x ananassa HOM05D002617 ORTHO05D006076 7.6e-76 288.9 208 69.2
CSS0005448 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 4.6e-73 279.6 285 57.5
Ah.03g138020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 6.0e-73 279.3 449 38.8
Actinidia29638 Actinidia chinensis HOM05D002617 ORTHO05D006076 1.1e-71 275.0 219 64.8
CDE03G0434 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 4.0e-69 266.5 278 55.0
Actinidia13004 Actinidia chinensis HOM05D002617 ORTHO05D006076 5.3e-69 266.2 215 64.2
CSS0031641 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 4.4e-68 263.1 243 60.1
Lsat_1_v5_gn_8_37540 Lactuca sativa HOM05D002617 ORTHO05D006076 3.9e-64 250.0 272 48.5
Mapoly0126s0021 Marchantia polymorpha HOM05D002617 ORTHO05D006076 1.8e-61 241.1 323 41.5
SMO005G0008 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 2.0e-60 237.7 303 47.5
Dinv33921 Davidia involucrata HOM05D002617 ORTHO05D009035 7.1e-58 229.2 230 53.9
Lj3A1022T61 Lonicera japonica HOM05D002617 ORTHO05D006076 7.6e-52 209.1 151 66.2
SMO197G0066 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 2.2e-51 207.6 316 43.0
Nn8g40574 Nelumbo nucifera HOM05D002617 ORTHO05D006076 5.7e-39 166.4 134 61.9
CBR_g21963 Chara braunii HOM05D002617 ORTHO05D006076 6.3e-38 162.9 351 31.9
Ah.02g115020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 7.7e-36 156.0 456 32.0
Dinv33922 Davidia involucrata HOM05D002617 ORTHO05D006076 7.7e-36 156.0 238 46.2
SGA_v2.0_scaffold150G36614 Striga asiatica HOM05D002617 ORTHO05D006076 1.0e-35 155.6 359 34.3
CDE04G2372 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 5.0e-27 126.7 183 42.1
PGSC0003DMG400003361 Solanum tuberosum HOM05D002617 ORTHO05D006076 1.0e-24 119.0 148 50.7
AagrBONN_evm.TU.Sc2ySwM_344.4970 Anthoceros agrestis HOM05D002617 ORTHO05D006076 6.7e-24 116.3 203 35.0
Pp3c8_12390 Physcomitrium patens HOM05D002617 ORTHO05D006076 1.5e-23 115.2 191 37.7
SalBow1G4795 Salvia bowleyana HOM05D002617 ORTHO05D006076 3.2e-18 97.4 107 50.5
CSS0013506 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 4.1e-13 80.5 112 40.2
Lsat_1_v5_gn_8_136421 Lactuca sativa HOM05D002617 ORTHO05D048373 1.5e-07 62.0 78 42.3
SEGI_27964 Sequoiadendron giganteum HOM05D002617 ORTHO05D006076 4.4e-07 60.5 76 46.1
Actinidia19277 Actinidia chinensis HOM05D002617 ORTHO05D006076 7.5e-07 59.7 35 77.1
CDE03G0290 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 8.3e-06 56.2 105 36.2


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