Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0025946 Lotus japonicus HOM05D007389 ORTHO05D009400 6.4e-216 753.8 384 100.0
Phvul.003G028200 Phaseolus vulgaris HOM05D007389 ORTHO05D009400 1.3e-147 526.9 386 73.6
Glyma.02G098600 Glycine max HOM05D007389 ORTHO05D009400 1.8e-141 506.5 386 71.8
VMungo1215G1613 Vigna mungo HOM05D007389 ORTHO05D009400 1.1e-130 470.7 371 69.0
Lalb_Chr10g0099831 Lupinus albus HOM05D007389 ORTHO05D009400 6.1e-126 454.9 384 65.9
GSVIVG01011940001 Vitis vinifera HOM05D007389 ORTHO05D009400 7.7e-121 438.0 382 61.8
Cfa018619 Carpinus fangiana HOM05D007389 ORTHO05D009400 6.5e-120 434.9 384 60.4
Actinidia16624 Actinidia chinensis HOM05D007389 ORTHO05D009400 1.9e-119 433.3 384 60.4
Rhsim09G0111300 Rhododendron simsii HOM05D007389 ORTHO05D009400 9.4e-119 431.0 383 60.6
Prupe.1G306500 Prunus persica HOM05D007389 ORTHO05D009400 6.1e-118 428.3 385 58.7
CSS0047863 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 8.0e-118 427.9 369 61.2
Hma1.2p1_0406F.1_g146090 Hydrangea macrophylla HOM05D007389 ORTHO05D009400 6.8e-117 424.9 385 60.3
Ciclev10031830m.g Citrus clementina HOM05D007389 ORTHO05D009400 1.2e-116 424.1 385 59.2
RcHm_v2.0_Chr4g0435681 Rosa chinensis HOM05D007389 ORTHO05D009400 4.4e-116 422.2 386 59.1
TWI31G0236 Tripterygium wilfordii HOM05D007389 ORTHO05D009400 4.4e-116 422.2 384 59.1
Gohir.A12G169500 Gossypium hirsutum HOM05D007389 ORTHO05D009400 4.8e-115 418.7 384 57.6
CSS0013871 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 3.1e-114 416.0 362 61.0
CiPaw.15G004300 Carya illinoinensis HOM05D007389 ORTHO05D009400 3.1e-114 416.0 369 60.7
Gorai.008G185300 Gossypium raimondii HOM05D007389 ORTHO05D009400 4.1e-114 415.6 384 57.3
Gohir.D12G172800 Gossypium hirsutum HOM05D007389 ORTHO05D009400 7.0e-114 414.8 384 57.0
vmacro10536 Vaccinium macrocarpon HOM05D007389 ORTHO05D009400 1.6e-113 413.7 370 61.6
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 2.7e-113 412.9 362 61.6
MD13G1045500 Malus domestica HOM05D007389 ORTHO05D009400 5.9e-113 411.8 384 56.8
Thecc.02G359800 Theobroma cacao HOM05D007389 ORTHO05D009400 1.7e-112 410.2 384 57.0
COL.COLO4_07880 Corchorus olitorius HOM05D007389 ORTHO05D009400 8.5e-112 407.9 377 56.8
FvH4_4g27970 Fragaria vesca HOM05D007389 ORTHO05D009400 1.5e-111 407.1 384 57.0
FAN17G2097 Fragaria x ananassa HOM05D007389 ORTHO05D009400 1.9e-111 406.8 384 57.0
Manes.06G071400 Manihot esculenta HOM05D007389 ORTHO05D009400 1.8e-109 400.2 385 56.1
Potri.010G128700 Populus trichocarpa HOM05D007389 ORTHO05D009400 5.2e-109 398.7 385 56.1
TAR371G0503 Trochodendron aralioides HOM05D007389 ORTHO05D009400 3.4e-108 396.0 359 59.6
Sabra10G0097900 Salix brachista HOM05D007389 ORTHO05D009400 9.8e-108 394.4 385 55.3
Sed0014526 Sechium edule HOM05D007389 ORTHO05D009400 2.8e-107 392.9 383 53.3
Eucgr.B03042 Eucalyptus grandis HOM05D007389 ORTHO05D009400 3.7e-107 392.5 385 55.1
Nn3g17765 Nelumbo nucifera HOM05D007389 ORTHO05D009400 1.8e-106 390.2 383 56.1
SEGI_35624 Sequoiadendron giganteum HOM05D007389 ORTHO05D009400 4.1e-106 389.0 383 54.3
ClCG05G022970 Citrullus lanatus HOM05D007389 ORTHO05D009400 9.2e-106 387.9 384 53.1
CsaV3_5G034040 Cucumis sativus L. HOM05D007389 ORTHO05D009400 1.6e-105 387.1 384 53.1
Cc11_g10500 Coffea canephora HOM05D007389 ORTHO05D009400 1.0e-104 384.4 385 54.5
Sopen04g002110 Solanum pennellii HOM05D007389 ORTHO05D009400 1.9e-103 380.2 386 54.7
Nn4g23752 Nelumbo nucifera HOM05D007389 ORTHO05D009400 7.3e-103 378.3 380 56.1
PGR102G2947 Punica granatum HOM05D007389 ORTHO05D009400 9.5e-103 377.9 385 54.0
HanXRQChr16g0529211 Helianthus annuus HOM05D007389 ORTHO05D009400 8.0e-102 374.8 383 54.3
SalBow8G0691 Salvia bowleyana HOM05D007389 ORTHO05D009400 6.8e-101 371.7 386 52.3
ATR0681G192 Amborella trichopoda HOM05D007389 ORTHO05D009400 8.9e-101 371.3 368 52.7
Nitab4.5_0014175g0010 Nicotiana tabacum HOM05D007389 ORTHO05D009400 8.9e-101 371.3 384 53.4
PGSC0003DMG400007468 Solanum tuberosum HOM05D007389 ORTHO05D009400 1.8e-98 363.6 386 53.1
Lsat_1_v5_gn_4_20121 Lactuca sativa HOM05D007389 ORTHO05D009400 2.4e-98 363.2 386 52.6
ECA234G1470 Erigeron canadensis HOM05D007389 ORTHO05D009400 9.2e-98 361.3 383 52.7
Sc11g0003170 Simmondsia chinensis HOM05D007389 ORTHO05D009400 1.9e-95 353.6 386 52.1
Migut.E00312 Erythranthe guttata HOM05D007389 ORTHO05D009400 9.5e-95 351.3 384 50.8
Peaxi162Scf00086g00615 Petunia axillaris HOM05D007389 ORTHO05D009400 4.7e-94 349.0 385 52.7
MELO3C012220.2 Cucumis melo HOM05D007389 ORTHO05D009400 6.2e-94 348.6 374 51.6
FAN22G0259 Fragaria x ananassa HOM05D007389 ORTHO05D009400 4.0e-93 345.9 344 56.7
Nitab4.5_0000280g0020 Nicotiana tabacum HOM05D007389 ORTHO05D009400 8.9e-93 344.7 384 51.3
AUR62035272 Chenopodium quinoa HOM05D007389 ORTHO05D009400 2.6e-92 343.2 384 51.6
THA.LOC104825707 Tarenaya hassleriana HOM05D007389 ORTHO05D009400 7.0e-90 335.1 384 48.2
SGA_v2.0_scaffold124G33583 Striga asiatica HOM05D007389 ORTHO05D009400 4.6e-89 332.4 384 48.4
Pp3c18_11800 Physcomitrium patens HOM05D007389 ORTHO05D009400 1.0e-88 331.3 383 48.3
Hund25095 Selenicereus undatus HOM05D007389 ORTHO05D009400 4.3e-87 325.9 384 47.9
AagrBONN_evm.TU.Sc2ySwM_228.4489 Anthoceros agrestis HOM05D007389 ORTHO05D009400 7.3e-87 325.1 384 46.1
Duzib268G0586 Durio zibethinus HOM05D007389 ORTHO05D009400 2.8e-86 323.2 324 53.7
Mapoly0108s0021 Marchantia polymorpha HOM05D007389 ORTHO05D009400 2.3e-85 320.1 385 45.7
CDE02G3618 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 3.1e-85 319.7 388 44.8
Lj3A1018T64 Lonicera japonica HOM05D007389 ORTHO05D009400 8.9e-85 318.2 367 49.6
CDE08G0863 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 2.0e-84 317.0 387 45.0
unitig_27.g25245 Utricularia gibba HOM05D007389 ORTHO05D009400 8.3e-83 311.6 368 46.5
Pp3c15_5000 Physcomitrium patens HOM05D007389 ORTHO05D009400 1.9e-82 310.5 410 43.9
Dinv21123 Davidia involucrata HOM05D007389 ORTHO05D009400 5.4e-82 308.9 271 63.8
PSO063G2802 Papaver somniferum HOM05D007389 ORTHO05D009400 7.1e-82 308.5 390 48.2
Oeu042041.1 Olea europaea HOM05D007389 ORTHO05D009400 9.2e-82 308.1 308 53.9
SMO361G0332 Selaginella moellendorffii HOM05D007389 ORTHO05D009400 3.5e-81 306.2 369 47.2
QL01p044805 Quercus lobata HOM05D007389 ORTHO05D009400 6.6e-80 302.0 270 63.0
Cpa.g.sc1.212 Carica papaya HOM05D007389 ORTHO05D009400 4.4e-76 289.3 268 60.1
Sp1g11820 Schrenkiella parvula HOM05D007389 ORTHO05D009400 4.4e-76 289.3 386 44.3
EL10Ac6g14465 Beta vulgaris HOM05D007389 ORTHO05D009400 1.9e-71 273.9 479 38.6
BraA08t35158Z Brassica rapa HOM05D007389 ORTHO05D009400 1.9e-71 273.9 379 42.5
Thhalv10009351m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 2.1e-70 270.4 385 41.3
A08p32350 Brassica napus HOM05D007389 ORTHO05D009400 6.2e-70 268.9 379 42.2
AT1G13310 Arabidopsis thaliana HOM05D007389 ORTHO05D009400 2.4e-69 266.9 388 40.2
BolC8t49230H Brassica oleracea HOM05D007389 ORTHO05D009400 9.9e-68 261.5 385 40.8
Carub.0001s1304 Capsella rubella HOM05D007389 ORTHO05D009400 1.7e-67 260.8 386 40.2
C08p16080 Brassica napus HOM05D007389 ORTHO05D009400 2.2e-67 260.4 379 40.9
CARHR013690 Cardamine hirsuta HOM05D007389 ORTHO05D009400 2.9e-67 260.0 386 39.6
AL1G25070 Arabidopsis lyrata HOM05D007389 ORTHO05D009400 3.8e-67 259.6 389 40.4
Aa31LG1G1460 Aethionema arabicum HOM05D007389 ORTHO05D009400 3.9e-64 249.6 376 42.0
AagrBONN_evm.TU.Sc2ySwM_362.2055 Anthoceros agrestis HOM05D007389 ORTHO05D009400 8.7e-64 248.4 269 53.2
HPP92_023813 Vanilla planifolia HOM05D007389 ORTHO05D009400 2.8e-62 243.4 385 39.0
HanXRQChr17g0567921 Helianthus annuus HOM05D007389 ORTHO05D009400 9.0e-61 238.4 262 50.4
AUR62002912 Chenopodium quinoa HOM05D007389 ORTHO05D009400 1.2e-57 228.0 384 38.3
Actinidia14859 Actinidia chinensis HOM05D007389 ORTHO05D009400 2.7e-57 226.9 238 56.7
Thhalv10023040m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 1.6e-54 217.6 399 39.1
BcaC06g31117 Brassica carinata HOM05D007389 ORTHO05D009400 1.9e-50 204.1 387 38.5
A06p42500 Brassica napus HOM05D001825 ORTHO05D002336 6.2e-46 189.1 387 37.0
BraA06t27163Z Brassica rapa HOM05D001825 ORTHO05D002336 5.3e-45 186.0 375 37.1
CBR_g39725 Chara braunii HOM05D001740 ORTHO05D001468 1.6e-41 174.5 270 41.1
QL01p044810 Quercus lobata HOM05D007389 ORTHO05D009400 2.5e-34 150.6 116 57.8
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 4.2e-34 149.8 216 43.5
BcaC06g33956 Brassica carinata HOM05D007389 ORTHO05D009400 5.5e-34 149.4 374 35.0
Duzib251G0237 Durio zibethinus HOM05D007389 ORTHO05D009400 2.1e-33 147.5 149 51.7
BolC7t44001H Brassica oleracea HOM05D001825 ORTHO05D002336 2.3e-32 144.1 328 36.9
Lalb_Chr04g0254881 Lupinus albus HOM05D007389 ORTHO05D009400 3.0e-32 143.7 114 64.0
PSO782G3111 Papaver somniferum HOM05D007389 ORTHO05D009400 1.1e-31 141.7 170 44.7
FAN12G3113 Fragaria x ananassa HOM05D007389 ORTHO05D009400 4.3e-31 139.8 133 57.1
C07p34700 Brassica napus HOM05D001825 ORTHO05D002336 2.2e-30 137.5 313 36.4
Nitab4.5_0000280g0130 Nicotiana tabacum HOM05D007389 ORTHO05D009400 5.0e-19 99.8 150 42.0
TAR629G0747 Trochodendron aralioides HOM05D007389 ORTHO05D009400 7.2e-18 95.9 155 43.9
TAR573G0003 Trochodendron aralioides HOM05D007389 ORTHO05D009400 9.4e-18 95.5 121 48.8
MCO11G211 Micromonas commoda HOM05D007389 ORTHO05D009400 3.0e-16 90.5 214 30.4
SalBow8G3870 Salvia bowleyana HOM05D007389 ORTHO05D009400 4.8e-14 83.2 101 47.5
Cre09.g393580 Chlamydomonas reinhardtii HOM05D007389 ORTHO05D143270 6.3e-06 56.2 228 27.2


User provided reference genes

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