Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0025845 Lotus japonicus HOM05D005478 ORTHO05D006426 5.1e-69 264.6 168 100.0
TPR.G31952 Trifolium pratense HOM05D005478 ORTHO05D006426 7.0e-42 174.5 167 60.5
Ca_04142_v3 Cicer arietinum L. HOM05D005478 ORTHO05D006426 2.0e-41 172.9 167 67.1
Medtr6g004420 Medicago truncatula HOM05D005478 ORTHO05D006426 2.9e-40 169.1 165 56.4
Phvul.004G004600 Phaseolus vulgaris HOM05D005478 ORTHO05D006426 1.5e-39 166.8 164 72.0
VMungo0464G1533 Vigna mungo HOM05D005478 ORTHO05D006426 1.9e-39 166.4 169 55.6
Glyma.05G002400 Glycine max HOM05D005478 ORTHO05D006426 9.4e-39 164.1 166 59.0
Glyma.19G002600 Glycine max HOM05D005478 ORTHO05D006426 1.6e-38 163.3 166 68.1
arahy.Tifrunner.gnm1.ann1.47572L Arachis hypogaea HOM05D005478 ORTHO05D006426 1.5e-36 156.8 176 60.8
Psat1g053440 Pisum sativum HOM05D005478 ORTHO05D006426 2.7e-33 146.0 173 54.9
arahy.Tifrunner.gnm1.ann1.WAXE9D Arachis hypogaea HOM05D005478 ORTHO05D006426 1.7e-32 143.3 202 54.5
Ciclev10016916m.g Citrus clementina HOM05D005478 ORTHO05D006426 3.2e-31 139.0 175 56.0
GSVIVG01032384001 Vitis vinifera HOM05D005478 ORTHO05D006426 1.6e-30 136.7 168 48.8
Lalb_Chr22g0360721 Lupinus albus HOM05D005478 ORTHO05D006426 1.8e-29 133.3 176 47.7
TWI36G1604 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 2.3e-29 132.9 176 48.9
QL02p074001 Quercus lobata HOM05D005478 ORTHO05D006426 2.0e-28 129.8 167 46.1
CsaV3_3G042880 Cucumis sativus L. HOM05D005478 ORTHO05D006426 2.6e-28 129.4 179 43.6
Lalb_Chr24g0403571 Lupinus albus HOM05D005478 ORTHO05D006426 2.6e-28 129.4 176 61.4
MELO3C026588.2 Cucumis melo HOM05D005478 ORTHO05D006426 4.4e-28 128.6 179 45.8
TWI56G0849 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 9.8e-28 127.5 173 44.5
Haze_14759 Corylus avellana HOM05D005478 ORTHO05D006426 1.3e-27 127.1 181 55.2
CiPaw.04G029700 Carya illinoinensis HOM05D005478 ORTHO05D006426 2.2e-27 126.3 174 46.0
COL.COLO4_30424 Corchorus olitorius HOM05D005478 ORTHO05D006426 2.8e-27 125.9 180 42.8
Gorai.006G097900 Gossypium raimondii HOM05D005478 ORTHO05D006426 3.7e-27 125.6 173 55.5
ClCG10G013780 Citrullus lanatus HOM05D005478 ORTHO05D006426 4.8e-27 125.2 179 41.3
Gohir.D09G082100 Gossypium hirsutum HOM05D005478 ORTHO05D006426 4.8e-27 125.2 173 55.5
CARHR148890 Cardamine hirsuta HOM05D005478 ORTHO05D006426 1.1e-26 124.0 180 43.9
Cfa007338 Carpinus fangiana HOM05D005478 ORTHO05D006426 1.1e-26 124.0 179 54.7
Actinidia36124 Actinidia chinensis HOM05D005478 ORTHO05D006426 1.4e-26 123.6 181 42.5
PGR142G0633 Punica granatum HOM05D005478 ORTHO05D006426 1.8e-26 123.2 177 46.9
CiPaw.03G045600 Carya illinoinensis HOM05D005478 ORTHO05D006426 3.1e-26 122.5 178 46.1
Gohir.A09G082300 Gossypium hirsutum HOM05D005478 ORTHO05D006426 3.1e-26 122.5 173 54.9
Hma1.2p1_0818F.1_g223270 Hydrangea macrophylla HOM05D005478 ORTHO05D006426 3.1e-26 122.5 174 42.5
Duzib235G1061 Durio zibethinus HOM05D005478 ORTHO05D006426 5.4e-26 121.7 177 44.6
TAR371G0105 Trochodendron aralioides HOM05D005478 ORTHO05D006426 5.4e-26 121.7 171 49.7
Atru.chr6.2431 Acer truncatum HOM05D005478 ORTHO05D006426 9.1e-26 120.9 171 52.0
Actinidia05981 Actinidia chinensis HOM05D005478 ORTHO05D006426 9.1e-26 120.9 166 47.6
TAR629G3442 Trochodendron aralioides HOM05D005478 ORTHO05D006426 9.1e-26 120.9 166 54.8
Eucgr.I01730 Eucalyptus grandis HOM05D005478 ORTHO05D006426 1.6e-25 120.2 180 55.0
Nn3g16686 Nelumbo nucifera HOM05D005478 ORTHO05D006426 1.6e-25 120.2 166 58.4
Cpa.g.sc108.77 Carica papaya HOM05D005478 ORTHO05D006426 5.9e-25 118.2 185 42.7
TWI12G0237 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 5.9e-25 118.2 174 43.1
Thhalv10004961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 1.0e-24 117.5 180 39.4
Sp2g16690 Schrenkiella parvula HOM05D005478 ORTHO05D006426 1.3e-24 117.1 178 40.4
DCAR_011260 Daucus carota HOM05D005478 ORTHO05D006426 1.7e-24 116.7 176 42.6
CANSAT64G0255 Cannabis sativa HOM05D005478 ORTHO05D006426 5.0e-24 115.2 178 45.5
Oeu033728.1 Olea europaea HOM05D005478 ORTHO05D006426 5.0e-24 115.2 175 49.1
AL5G16940 Arabidopsis lyrata HOM05D005478 ORTHO05D006426 6.5e-24 114.8 185 39.5
Duzib160G0719 Durio zibethinus HOM05D005478 ORTHO05D006426 6.5e-24 114.8 174 39.7
Thecc.06G091700 Theobroma cacao HOM05D005478 ORTHO05D006426 8.5e-24 114.4 177 40.7
Sed0022021 Sechium edule HOM05D005478 ORTHO05D006426 1.1e-23 114.0 174 40.8
Duzib192G0894 Durio zibethinus HOM05D005478 ORTHO05D006426 1.9e-23 113.2 172 45.3
Prupe.3G293900 Prunus persica HOM05D005478 ORTHO05D006426 2.5e-23 112.8 185 39.5
MSTRG.15534 Avicennia marina HOM05D005478 ORTHO05D006426 7.2e-23 111.3 176 43.8
BraA09t35982Z Brassica rapa HOM05D005478 ORTHO05D006426 7.2e-23 111.3 173 38.7
A09p03440 Brassica napus HOM05D005478 ORTHO05D006426 9.4e-23 110.9 173 39.3
FAN05G2721 Fragaria x ananassa HOM05D005478 ORTHO05D006426 9.4e-23 110.9 177 46.9
FAN14G4849 Fragaria x ananassa HOM05D005478 ORTHO05D006426 9.4e-23 110.9 178 46.6
FvH4_6g51790 Fragaria vesca HOM05D005478 ORTHO05D006426 1.2e-22 110.5 178 46.6
FAN09G1593 Fragaria x ananassa HOM05D005478 ORTHO05D006426 1.2e-22 110.5 178 46.6
THA.LOC104825319 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 1.2e-22 110.5 177 38.4
Actinidia18441 Actinidia chinensis HOM05D005478 ORTHO05D006426 1.6e-22 110.2 177 41.2
Potri.001G343200 Populus trichocarpa HOM05D005478 ORTHO05D006426 1.6e-22 110.2 174 42.0
Thhalv10027961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 2.1e-22 109.8 172 37.8
FAN02G1690 Fragaria x ananassa HOM05D005478 ORTHO05D006426 3.6e-22 109.0 177 46.3
Sabra16G0222600 Salix brachista HOM05D005478 ORTHO05D006426 8.0e-22 107.8 174 41.4
Rhsim10G0014600 Rhododendron simsii HOM05D005478 ORTHO05D006426 1.0e-21 107.5 174 50.6
Migut.K01412 Erythranthe guttata HOM05D005478 ORTHO05D006426 1.4e-21 107.1 176 48.3
Sopen02g038220 Solanum pennellii HOM05D005478 ORTHO05D006426 2.3e-21 106.3 168 43.5
unitig_88.g27693 Utricularia gibba HOM05D000631 ORTHO05D000524 2.3e-21 106.3 168 38.7
MSTRG.3284 Avicennia marina HOM05D005478 ORTHO05D006426 5.2e-21 105.1 176 39.8
BolC9t53284H Brassica oleracea HOM05D005478 ORTHO05D006426 5.2e-21 105.1 173 38.7
AT3G27520 Arabidopsis thaliana HOM05D005478 ORTHO05D006426 8.8e-21 104.4 186 38.2
Solyc02g093450.3 Solanum lycopersicum HOM05D005478 ORTHO05D006426 1.2e-20 104.0 168 43.5
Aa31LG2G5140 Aethionema arabicum HOM05D005478 ORTHO05D006426 1.5e-20 103.6 191 33.5
ATR0824G160 Amborella trichopoda HOM05D005478 ORTHO05D006426 2.0e-20 103.2 164 39.0
BcaC04g23900 Brassica carinata HOM05D005478 ORTHO05D006426 2.0e-20 103.2 172 37.8
C09p03650 Brassica napus HOM05D005478 ORTHO05D006426 2.0e-20 103.2 172 37.8
CSS0007505 Camellia sinensis var. sinensis HOM05D005478 ORTHO05D006426 2.0e-20 103.2 179 49.7
Carub.0005s0595 Capsella rubella HOM05D005478 ORTHO05D006426 2.0e-20 103.2 183 38.8
Lsat_1_v5_gn_0_18280 Lactuca sativa HOM05D005478 ORTHO05D006426 2.6e-20 102.8 175 43.4
Oeu048609.1 Olea europaea HOM05D005478 ORTHO05D006426 4.4e-20 102.1 180 54.4
Sc07g0003180 Simmondsia chinensis HOM05D005478 ORTHO05D006426 5.7e-20 101.7 169 37.9
AUR62041940 Chenopodium quinoa HOM05D005478 ORTHO05D006426 9.8e-20 100.9 180 35.0
MBI14_g36718_MAGBIO Magnolia biondii HOM05D005478 ORTHO05D006426 1.7e-19 100.1 162 54.9
Manes.17G111100 Manihot esculenta HOM05D005478 ORTHO05D006426 1.7e-19 100.1 176 40.9
Peaxi162Scf00700g00430 Petunia axillaris HOM05D005478 ORTHO05D006426 1.7e-19 100.1 166 39.8
PGSC0003DMG400012636 Solanum tuberosum HOM05D005478 ORTHO05D006426 1.7e-19 100.1 168 42.9
HanXRQChr14g0451171 Helianthus annuus HOM05D005478 ORTHO05D006426 2.2e-19 99.8 173 52.6
BcaB04g19441 Brassica carinata HOM05D005478 ORTHO05D006426 3.7e-19 99.0 174 37.4
AUR62028419 Chenopodium quinoa HOM05D005478 ORTHO05D006426 3.7e-19 99.0 180 34.4
PSO478G1356 Papaver somniferum HOM05D005478 ORTHO05D006426 3.7e-19 99.0 177 39.0
vmacro05877 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 3.7e-19 99.0 211 44.1
SGA_v2.0_scaffold47G17517 Striga asiatica HOM05D005478 ORTHO05D006426 4.9e-19 98.6 177 40.1
Lsat_1_v5_gn_2_91160 Lactuca sativa HOM05D005478 ORTHO05D006426 6.3e-19 98.2 174 51.7
CDE09G0806 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 1.1e-18 97.4 171 33.9
PSO017G4510 Papaver somniferum HOM05D005478 ORTHO05D006426 1.1e-18 97.4 180 45.0
ECA238G3024 Erigeron canadensis HOM05D005478 ORTHO05D006426 1.4e-18 97.1 176 47.2
SGA_v2.0_scaffold30G12408 Striga asiatica HOM05D005478 ORTHO05D006426 2.4e-18 96.3 181 52.5
HPP92_006182 Vanilla planifolia HOM05D005478 ORTHO05D006426 2.4e-18 96.3 162 36.4
RcHm_v2.0_Chr2g0173291 Rosa chinensis HOM05D005478 ORTHO05D006426 4.1e-18 95.5 122 46.7
HanXRQChr07g0199031 Helianthus annuus HOM05D005478 ORTHO05D006426 5.4e-18 95.1 174 45.4
vmacro18294 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 9.2e-18 94.4 210 43.8
Aqoxy5G03740 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 1.2e-17 94.0 176 35.8
MD17G1022200 Malus domestica HOM05D005478 ORTHO05D006426 2.7e-17 92.8 182 40.1
CDE02G4674 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 3.5e-17 92.4 163 34.4
PSO063G0871 Papaver somniferum HOM05D005478 ORTHO05D006426 4.5e-17 92.0 166 34.9
THA.LOC104825211 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 4.5e-17 92.0 123 44.7
C07p36630 Brassica napus HOM05D005478 ORTHO05D006426 5.9e-17 91.7 175 34.3
Hund15527 Selenicereus undatus HOM05D005478 ORTHO05D006426 1.3e-16 90.5 173 35.3
BcaC06g30982 Brassica carinata HOM05D005478 ORTHO05D006426 1.7e-16 90.1 174 35.1
A06p41110 Brassica napus HOM05D005478 ORTHO05D006426 2.3e-16 89.7 175 33.1
BraA06t27034Z Brassica rapa HOM05D005478 ORTHO05D006426 2.3e-16 89.7 175 33.1
MD09G1022900 Malus domestica HOM05D005478 ORTHO05D006426 3.8e-16 89.0 183 35.5
PSO754G0087 Papaver somniferum HOM05D005478 ORTHO05D006426 3.8e-16 89.0 166 34.3
SEGI_00200 Sequoiadendron giganteum HOM05D005478 ORTHO05D006426 3.3e-15 85.9 156 36.5
BcaC06g33809 Brassica carinata HOM05D005478 ORTHO05D006426 9.5e-15 84.3 175 32.6
BolC7t44179H Brassica oleracea HOM05D005478 ORTHO05D006426 1.6e-14 83.6 175 32.0
Aqoxy1G02464 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 3.0e-13 79.3 156 35.3
Dinv33426 Davidia involucrata HOM05D005478 ORTHO05D006426 5.7e-12 75.1 54 68.5
Os02g0595300 Oryza sativa ssp. japonica HOM05D005478 ORTHO05D006426 3.2e-10 69.3 170 41.2
Ah.02g128220 Amaranthus hybridus HOM05D005478 ORTHO05D006426 7.0e-10 68.2 174 29.3
Cc07_g01510 Coffea canephora HOM05D005478 ORTHO05D006426 2.0e-09 66.6 81 44.4
Nn3g16214 Nelumbo nucifera HOM05D005478 ORTHO05D006426 2.0e-09 66.6 85 47.1
Gohir.D05G130900 Gossypium hirsutum HOM05D005478 ORTHO05D006426 3.5e-09 65.9 118 39.0
Nitab4.5_0000326g0190 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.5e-07 60.5 52 57.7
MBI10_g11211_MAGBIO Magnolia biondii HOM05D005478 ORTHO05D006426 2.1e-06 56.6 62 48.4
Lju41C43G9 Lonicera japonica HOM05D005478 ORTHO05D006426 4.7e-06 55.5 116 52.6


User provided reference genes

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