Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0025232 Lotus japonicus HOM05D002953 ORTHO05D003249 5.8e-96 355.1 337 100.0
Lalb_Chr17g0341061 Lupinus albus HOM05D002953 ORTHO05D003249 9.0e-41 171.8 361 40.7
TPR.G24432 Trifolium pratense HOM05D002953 ORTHO05D003249 4.5e-40 169.5 336 42.9
Medtr5g043690 Medicago truncatula HOM05D002953 ORTHO05D003249 7.9e-37 158.7 342 40.9
Psat2g127880 Pisum sativum HOM05D002953 ORTHO05D003249 9.1e-33 145.2 259 43.6
Lj4g0014446 Lotus japonicus HOM05D002953 ORTHO05D003249 1.1e-27 128.3 379 35.4
VMungo1215G1853 Vigna mungo HOM05D002953 ORTHO05D003249 3.7e-26 123.2 342 33.3
Medtr4g082910 Medicago truncatula HOM05D002953 ORTHO05D003249 7.7e-24 115.5 359 34.0
Phvul.002G068600 Phaseolus vulgaris HOM05D002953 ORTHO05D003249 8.5e-23 112.1 259 39.4
Glyma.01G056000 Glycine max HOM05D002953 ORTHO05D003249 1.2e-21 108.2 338 34.3
Glyma.02G114300 Glycine max HOM05D002953 ORTHO05D003249 4.8e-18 96.3 258 35.7
TPR.G34076 Trifolium pratense HOM05D002953 ORTHO05D003249 9.1e-17 92.0 363 31.7
Ca_04942_v3 Cicer arietinum L. HOM05D002953 ORTHO05D003249 1.6e-16 91.3 152 52.6
Lalb_Chr16g0385611 Lupinus albus HOM05D002953 ORTHO05D003249 3.5e-16 90.1 378 44.7
Phvul.002G168100 Phaseolus vulgaris HOM05D002953 ORTHO05D003249 2.2e-15 87.4 373 30.3
Ca_18812_v3 Cicer arietinum L. HOM05D002953 ORTHO05D003249 7.2e-14 82.4 247 42.9
VMungo0251G2769 Vigna mungo HOM05D002953 ORTHO05D003249 2.1e-13 80.9 343 29.4
Actinidia19918 Actinidia chinensis HOM05D002953 ORTHO05D003249 4.7e-13 79.7 356 26.7
CiPaw.05G127400 Carya illinoinensis HOM05D002953 ORTHO05D003249 4.7e-13 79.7 271 30.3
PGR102G2110 Punica granatum HOM05D002953 ORTHO05D003249 1.4e-12 78.2 358 28.2
Medtr5g043685 Medicago truncatula HOM05D002953 ORTHO05D003249 1.8e-12 77.8 252 33.7
FAN07G2390 Fragaria x ananassa HOM05D000954 ORTHO05D000822 2.3e-12 77.4 341 27.6
Hma1.2p1_0357F.1_g134470 Hydrangea macrophylla HOM05D002953 ORTHO05D003249 2.3e-12 77.4 343 42.9
CANSAT64G0943 Cannabis sativa HOM05D002953 ORTHO05D003249 3.0e-12 77.0 362 24.9
Haze_11930 Corylus avellana HOM05D002953 ORTHO05D003249 6.8e-12 75.9 347 31.4
Ciclev10033969m.g Citrus clementina HOM05D002953 ORTHO05D003249 2.6e-11 73.9 384 26.3
QL03p071046 Quercus lobata HOM05D002953 ORTHO05D003249 2.6e-11 73.9 356 29.8
Dinv16709 Davidia involucrata HOM05D002953 ORTHO05D003249 4.4e-11 73.2 273 30.8
Psat7g135400 Pisum sativum HOM05D002953 ORTHO05D003249 7.5e-11 72.4 263 30.0
FvH4_4g30432 Fragaria vesca HOM05D002953 ORTHO05D003249 3.7e-10 70.1 257 30.0
arahy.Tifrunner.gnm1.ann1.GA8N54 Arachis hypogaea HOM05D002953 ORTHO05D003249 8.3e-10 68.9 346 34.1
CSS0004001 Camellia sinensis var. sinensis HOM05D002953 ORTHO05D003249 8.3e-10 68.9 345 23.8
Glyma.20G027100 Glycine max HOM05D002953 ORTHO05D003249 3.1e-09 67.0 247 33.6
SalBow2G2783 Salvia bowleyana HOM05D002953 ORTHO05D003249 4.1e-09 66.6 364 33.2
SalBow2G1905 Salvia bowleyana HOM05D002953 ORTHO05D003249 5.4e-09 66.2 364 33.2
Nitab4.5_0000014g0320 Nicotiana tabacum HOM05D002953 ORTHO05D003249 9.1e-09 65.5 349 23.5
FAN12G1055 Fragaria x ananassa HOM05D002953 ORTHO05D003249 1.6e-08 64.7 248 29.4
Prupe.1G282700 Prunus persica HOM05D002953 ORTHO05D003249 3.5e-08 63.5 348 38.2
CiPaw.06G090600 Carya illinoinensis HOM05D002953 ORTHO05D003249 5.9e-08 62.8 312 35.9
Potri.010G160900 Populus trichocarpa HOM05D002953 ORTHO05D003249 5.9e-08 62.8 343 26.2
Glyma.07G226700 Glycine max HOM05D002953 ORTHO05D003249 1.3e-07 61.6 252 36.5
Aqoxy3G00465 Aquilegia oxysepala HOM05D002953 ORTHO05D003249 1.7e-07 61.2 340 27.1
arahy.Tifrunner.gnm1.ann1.FH6P3F Arachis hypogaea HOM05D002953 ORTHO05D003249 2.9e-07 60.5 353 34.6
FAN22G1160 Fragaria x ananassa HOM05D000954 ORTHO05D003249 2.9e-07 60.5 330 25.5
Cc11_g12310 Coffea canephora HOM05D002953 ORTHO05D003249 3.8e-07 60.1 365 32.1
Nn4g23349 Nelumbo nucifera HOM05D002953 ORTHO05D003249 3.8e-07 60.1 356 23.0
Potri.008G093300 Populus trichocarpa HOM05D002953 ORTHO05D003249 3.8e-07 60.1 363 23.7
RcHm_v2.0_Chr4g0438751 Rosa chinensis HOM05D002953 ORTHO05D003249 1.1e-06 58.5 165 36.4
MD13G1065400 Malus domestica HOM05D002953 ORTHO05D003249 1.5e-06 58.2 238 26.9
TWI75G0656 Tripterygium wilfordii HOM05D002953 ORTHO05D003249 2.5e-06 57.4 321 25.2
MSTRG.737 Avicennia marina HOM05D002953 ORTHO05D003249 5.5e-06 56.2 62 46.8


User provided reference genes

Program Settings