Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0024514 Lotus japonicus HOM05D007594 ORTHO05D009607 3.7e-76 288.1 142 100.0
Lj3g0014217 Lotus japonicus HOM05D007594 ORTHO05D009607 3.3e-29 132.1 67 94.0
Medtr3g013490 Medicago truncatula HOM05D007594 ORTHO05D009607 4.7e-23 111.7 67 77.6
Psat5g215360 Pisum sativum HOM05D007594 ORTHO05D009607 2.3e-22 109.4 67 76.1
TPR.G20651 Trifolium pratense HOM05D007594 ORTHO05D009607 4.0e-22 108.6 67 76.1
Glyma.11G170937 Glycine max HOM05D007594 ORTHO05D009607 5.2e-22 108.2 64 81.2
Phvul.005G018200 Phaseolus vulgaris HOM05D007594 ORTHO05D009607 2.0e-21 106.3 64 79.7
VMungo1080G0650 Vigna mungo HOM05D007594 ORTHO05D009607 3.7e-20 102.1 64 78.1
Lalb_Chr24g0402821 Lupinus albus HOM05D007594 ORTHO05D009607 2.4e-19 99.4 67 70.1
arahy.Tifrunner.gnm1.ann1.HR2C9L Arachis hypogaea HOM05D007594 ORTHO05D009607 5.4e-19 98.2 64 75.0
arahy.Tifrunner.gnm1.ann1.IJ2ITM Arachis hypogaea HOM05D007594 ORTHO05D009607 5.4e-19 98.2 64 75.0
Haze_02988 Corylus avellana HOM05D007594 ORTHO05D009607 3.5e-18 95.5 76 57.9
TAR633G1990 Trochodendron aralioides HOM05D007594 ORTHO05D009607 1.7e-17 93.2 64 67.2
vmacro13773 Vaccinium macrocarpon HOM05D007594 ORTHO05D009607 2.3e-17 92.8 69 60.9
CsaV3_5G029660 Cucumis sativus L. HOM05D007594 ORTHO05D009607 2.9e-17 92.4 64 64.1
Nn7g36922 Nelumbo nucifera HOM05D007594 ORTHO05D009607 6.5e-17 91.3 64 64.1
Nn032s41616 Nelumbo nucifera HOM05D007594 ORTHO05D009607 8.6e-17 90.9 62 64.5
Dinv03295 Davidia involucrata HOM05D007594 ORTHO05D009607 1.1e-16 90.5 62 64.5
Sed0005696 Sechium edule HOM05D007594 ORTHO05D009607 1.1e-16 90.5 65 58.5
Hma1.2p1_1342F.1_g276950 Hydrangea macrophylla HOM05D007594 ORTHO05D009607 1.5e-16 90.1 62 64.5
ClCG11G013140 Citrullus lanatus HOM05D007594 ORTHO05D009607 1.9e-16 89.7 64 62.5
ATR0307G127 Amborella trichopoda HOM05D007594 ORTHO05D009607 5.5e-16 88.2 75 52.0
Ciclev10003355m.g Citrus clementina HOM05D007594 ORTHO05D009607 5.5e-16 88.2 67 58.2
Manes.04G156000 Manihot esculenta HOM05D007594 ORTHO05D009607 5.5e-16 88.2 67 62.7
CANSAT56G2828 Cannabis sativa HOM05D007594 ORTHO05D009607 2.1e-15 86.3 67 61.2
Aqoxy1G00418 Aquilegia oxysepala HOM05D007594 ORTHO05D009607 4.7e-15 85.1 56 66.1
Lj9P657T24 Lonicera japonica HOM05D007594 ORTHO05D009607 6.1e-15 84.7 61 60.7
Actinidia06215 Actinidia chinensis HOM05D007594 ORTHO05D009607 1.0e-14 84.0 64 57.8
Prupe.2G044000 Prunus persica HOM05D007594 ORTHO05D009607 1.0e-14 84.0 67 58.2
CiPaw.13G016300 Carya illinoinensis HOM05D007594 ORTHO05D009607 2.3e-14 82.8 67 53.7
Rhsim07G0071100 Rhododendron simsii HOM05D007594 ORTHO05D009607 2.3e-14 82.8 67 56.7
HanXRQChr05g0146261 Helianthus annuus HOM05D007594 ORTHO05D009607 4.0e-14 82.0 64 54.7
Duzib128G1040 Durio zibethinus HOM05D007594 ORTHO05D009607 5.2e-14 81.6 67 55.2
Thecc.10G140800 Theobroma cacao HOM05D007594 ORTHO05D009607 5.2e-14 81.6 67 55.2
ECA246G0181 Erigeron canadensis HOM05D007594 ORTHO05D009607 8.9e-14 80.9 62 58.1
MD00G1152500 Malus domestica HOM05D007594 ORTHO05D009607 8.9e-14 80.9 67 56.7
GSVIVG01036598001 Vitis vinifera HOM05D007594 ORTHO05D009607 8.9e-14 80.9 67 59.7
DCAR_006600 Daucus carota HOM05D007594 ORTHO05D009607 1.2e-13 80.5 64 54.7
MBI13_g07373_MAGBIO Magnolia biondii HOM05D007594 ORTHO05D009607 1.2e-13 80.5 67 55.2
Nitab4.5_0004215g0020 Nicotiana tabacum HOM05D007594 ORTHO05D009607 2.0e-13 79.7 62 59.7
Aqoxy1G00415 Aquilegia oxysepala HOM05D007594 ORTHO05D009607 2.6e-13 79.3 75 50.7
PSO339G5236 Papaver somniferum HOM05D007594 ORTHO05D009607 3.4e-13 79.0 64 51.6
PSO384G4678 Papaver somniferum HOM05D007594 ORTHO05D009607 3.4e-13 79.0 64 51.6
EL10Ac3g05954 Beta vulgaris HOM05D007594 ORTHO05D009607 5.7e-13 78.2 72 50.0
Sopen07g024530 Solanum pennellii HOM05D007594 ORTHO05D009607 5.7e-13 78.2 62 56.5
FvH4_7g03921 Fragaria vesca HOM05D007594 ORTHO05D009607 1.3e-12 77.0 67 58.2
FAN06G1277 Fragaria x ananassa HOM05D007594 ORTHO05D009607 1.3e-12 77.0 67 58.2
Gohir.D10G197300 Gossypium hirsutum HOM05D007594 ORTHO05D009607 1.7e-12 76.6 67 52.2
Peaxi162Scf02035g00032 Petunia axillaris HOM05D007594 ORTHO05D009607 1.7e-12 76.6 67 55.2
Hma1.2p1_1730F.1_g299670 Hydrangea macrophylla HOM05D007594 ORTHO05D009607 2.8e-12 75.9 57 61.4
Nitab4.5_0004358g0020 Nicotiana tabacum HOM05D007594 ORTHO05D009607 2.8e-12 75.9 67 55.2
Solyc07g048100.3 Solanum lycopersicum HOM05D007594 ORTHO05D009607 2.8e-12 75.9 62 54.8
RcHm_v2.0_Chr1g0327541 Rosa chinensis HOM05D007594 ORTHO05D009607 4.9e-12 75.1 67 55.2
Sc11g0006300 Simmondsia chinensis HOM05D007594 ORTHO05D009607 4.9e-12 75.1 67 47.8
Cc00_g06100 Coffea canephora HOM05D007594 ORTHO05D009607 8.3e-12 74.3 66 53.0
Potri.003G193100 Populus trichocarpa HOM05D007594 ORTHO05D009607 8.3e-12 74.3 67 53.7
TWI63G1387 Tripterygium wilfordii HOM05D007594 ORTHO05D009607 8.3e-12 74.3 62 56.5
Gohir.A10G189500 Gossypium hirsutum HOM05D007594 ORTHO05D009607 1.1e-11 73.9 67 52.2
AUR62023865 Chenopodium quinoa HOM05D007594 ORTHO05D009607 1.4e-11 73.6 63 52.4
Migut.B01185 Erythranthe guttata HOM05D007594 ORTHO05D009607 1.4e-11 73.6 62 54.8
Zm00001eb062110 Zea mays HOM05D007594 ORTHO05D009607 1.4e-11 73.6 67 53.7
Gorai.011G220800 Gossypium raimondii HOM05D007594 ORTHO05D009607 1.8e-11 73.2 67 52.2
Eucgr.G03206 Eucalyptus grandis HOM05D007594 ORTHO05D009607 3.1e-11 72.4 67 50.7
CAN.G897.9 Capsicum annuum HOM05D007594 ORTHO05D009607 5.4e-11 71.6 60 56.7
Os03g0811200 Oryza sativa ssp. japonica HOM05D007594 ORTHO05D009607 7.0e-11 71.2 67 49.3
Lsat_1_v5_gn_1_118241 Lactuca sativa HOM05D007594 ORTHO05D009607 9.2e-11 70.9 64 45.3
PGSC0003DMG400006140 Solanum tuberosum HOM05D007594 ORTHO05D009607 9.2e-11 70.9 62 53.2
THA.LOC104826746 Tarenaya hassleriana HOM05D007594 ORTHO05D009607 9.2e-11 70.9 67 49.3
Atru.chr12.1242 Acer truncatum HOM05D007594 ORTHO05D009607 3.5e-10 68.9 54 57.4
SalBow5G4015 Salvia bowleyana HOM05D007594 ORTHO05D009607 4.5e-10 68.6 61 47.5
Hund03164 Selenicereus undatus HOM05D007594 ORTHO05D009607 1.3e-09 67.0 62 45.2
CSS0016538 Camellia sinensis var. sinensis HOM05D007594 ORTHO05D009607 6.6e-09 64.7 55 54.5
SGA_v2.0_scaffold124G33645 Striga asiatica HOM05D007594 ORTHO05D009607 1.1e-08 63.9 62 48.4
vmacro13770 Vaccinium macrocarpon HOM05D007594 ORTHO05D009607 1.1e-08 63.9 56 53.6
FAN03G3082 Fragaria x ananassa HOM05D000688 ORTHO05D003888 1.5e-08 63.5 64 50.0
FAN01G0543 Fragaria x ananassa HOM05D007594 ORTHO05D009607 1.2e-07 60.5 55 54.5
unitig_22.g5331 Utricularia gibba HOM05D007594 ORTHO05D009607 2.8e-07 59.3 60 51.7


User provided reference genes

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