Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0024512 Lotus japonicus HOM05D007655 ORTHO05D009698 8.8e-161 570.5 339 100.0
Lalb_Chr03g0033351 Lupinus albus HOM05D007655 ORTHO05D009698 3.6e-90 335.9 335 54.6
Ca_19338_v3 Cicer arietinum L. HOM05D007655 ORTHO05D009698 3.2e-86 322.8 335 57.9
Glyma.09G157400 Glycine max HOM05D007655 ORTHO05D009698 3.2e-86 322.8 337 64.1
Psat1g113880 Pisum sativum HOM05D007655 ORTHO05D009698 6.9e-81 305.1 333 48.9
Phvul.004G132400 Phaseolus vulgaris HOM05D007655 ORTHO05D009698 9.0e-81 304.7 335 60.9
TPR.G40357 Trifolium pratense HOM05D007655 ORTHO05D009698 3.5e-77 292.7 335 48.7
Ca_25253_v3 Cicer arietinum L. HOM05D007655 ORTHO05D009698 1.8e-76 290.4 312 50.0
VMungo0464G0151 Vigna mungo HOM05D007655 ORTHO05D009698 2.4e-73 280.0 329 59.3
Medtr6g065100 Medicago truncatula HOM05D007655 ORTHO05D009698 3.2e-70 269.6 337 59.3
Haze_22616 Corylus avellana HOM05D007655 ORTHO05D009698 6.3e-58 228.8 326 50.6
Cfa013933 Carpinus fangiana HOM05D007655 ORTHO05D009698 4.5e-56 222.6 319 48.0
CiPaw.02G194200 Carya illinoinensis HOM05D007655 ORTHO05D009698 1.6e-53 214.2 335 48.1
Atru.chr12.88 Acer truncatum HOM05D007655 ORTHO05D009698 3.1e-49 199.9 325 37.2
PGR044G0328 Punica granatum HOM05D007655 ORTHO05D009698 3.5e-48 196.4 320 50.9
FAN06G4929 Fragaria x ananassa HOM05D007655 ORTHO05D009698 1.7e-47 194.1 327 51.7
QL08p063505 Quercus lobata HOM05D007655 ORTHO05D009698 1.7e-47 194.1 335 49.9
Carub.0005s2276 Capsella rubella HOM05D007655 ORTHO05D009698 5.0e-47 192.6 331 45.9
FvH4_7g24790 Fragaria vesca HOM05D007655 ORTHO05D009698 1.1e-46 191.4 327 51.1
Manes.09G163100 Manihot esculenta HOM05D004613 ORTHO05D006095 1.9e-46 190.7 326 47.5
Hma1.2p1_0523F.1_g172110 Hydrangea macrophylla HOM05D007655 ORTHO05D009698 1.6e-45 187.6 291 50.5
AL5G37300 Arabidopsis lyrata HOM05D007655 ORTHO05D009698 3.9e-44 183.0 329 44.1
CAN.G1161.24 Capsicum annuum HOM05D007655 ORTHO05D009698 5.2e-44 182.6 288 44.1
Gohir.A06G170600 Gossypium hirsutum HOM05D007655 ORTHO05D009698 5.2e-44 182.6 332 45.5
Cc00_g02280 Coffea canephora HOM05D007655 ORTHO05D009698 6.7e-44 182.2 291 48.1
AT3G56030 Arabidopsis thaliana HOM05D007655 ORTHO05D009698 1.5e-43 181.0 333 42.3
A09p48980 Brassica napus HOM05D007655 ORTHO05D009698 3.3e-43 179.9 329 46.5
BraA09t40353Z Brassica rapa HOM05D007655 ORTHO05D009698 3.3e-43 179.9 329 46.5
Sp5g06510 Schrenkiella parvula HOM05D007655 ORTHO05D009698 3.3e-43 179.9 330 46.4
FAN10G0222 Fragaria x ananassa HOM05D007655 ORTHO05D009698 2.2e-42 177.2 327 49.2
C08p31340 Brassica napus HOM05D007655 ORTHO05D009698 2.8e-42 176.8 285 49.8
BolC8t50755H Brassica oleracea HOM05D007655 ORTHO05D009698 2.8e-42 176.8 285 49.8
Actinidia00669 Actinidia chinensis HOM05D007655 ORTHO05D009698 3.7e-42 176.4 277 39.4
Aa31LG5G19330 Aethionema arabicum HOM05D007655 ORTHO05D009698 4.8e-42 176.0 321 45.5
CARHR166100 Cardamine hirsuta HOM05D007655 ORTHO05D009698 6.3e-42 175.6 327 46.8
COL.COLO4_06431 Corchorus olitorius HOM05D007655 ORTHO05D009698 6.3e-42 175.6 300 49.0
RcHm_v2.0_Chr1g0370651 Rosa chinensis HOM05D007655 ORTHO05D009698 1.8e-41 174.1 326 48.2
Nitab4.5_0002701g0030 Nicotiana tabacum HOM05D007655 ORTHO05D009698 4.1e-41 172.9 291 47.1
Cpa.g.sc19.153 Carica papaya HOM05D007655 ORTHO05D009698 2.0e-40 170.6 295 51.2
HanXRQChr09g0253251 Helianthus annuus HOM05D007655 ORTHO05D009698 2.6e-40 170.2 316 40.8
arahy.Tifrunner.gnm1.ann1.P4Y6YZ Arachis hypogaea HOM05D000585 ORTHO05D001841 6.5e-39 165.6 194 46.9
Thhalv10006093m.g Eutrema salsugineum HOM05D007655 ORTHO05D009698 8.5e-39 165.2 310 46.8
DCAR_029510 Daucus carota HOM05D007655 ORTHO05D009698 1.1e-38 164.9 312 35.3
Thecc.10G013100 Theobroma cacao HOM05D007655 ORTHO05D009698 9.4e-38 161.8 306 46.4
Aqoxy3G03604 Aquilegia oxysepala HOM05D007655 ORTHO05D009698 2.7e-37 160.2 293 47.4
arahy.Tifrunner.gnm1.ann1.L8T4NM Arachis hypogaea HOM05D007655 ORTHO05D009698 5.2e-36 156.0 144 54.2
MSTRG.197 Avicennia marina HOM05D007655 ORTHO05D009698 8.8e-36 155.2 285 33.0
TWI09G1069 Tripterygium wilfordii HOM05D007655 ORTHO05D009698 8.8e-36 155.2 331 43.5
Lj1P959T25 Lonicera japonica HOM05D007655 ORTHO05D009698 1.5e-35 154.5 320 44.1
Ciclev10033792m.g Citrus clementina HOM05D007655 ORTHO05D000636 3.3e-35 153.3 297 48.8
Gohir.D06G178400 Gossypium hirsutum HOM05D007655 ORTHO05D009698 3.1e-33 146.7 299 44.8
CANSAT56G4119 Cannabis sativa HOM05D007655 ORTHO05D009698 1.6e-32 144.4 291 44.0
Gorai.N006800 Gossypium raimondii HOM05D007655 ORTHO05D009698 4.5e-32 142.9 299 44.5
Aa31LG10G10970 Aethionema arabicum HOM05D007655 ORTHO05D009698 1.0e-31 141.7 287 45.3
TAR623G1347 Trochodendron aralioides HOM05D007655 ORTHO05D009698 1.7e-31 141.0 333 42.3
Prupe.2G253200 Prunus persica HOM05D000815 ORTHO05D000636 2.9e-31 140.2 317 44.5
TAR131G0001 Trochodendron aralioides HOM05D007655 ORTHO05D009698 3.8e-31 139.8 333 42.0
FAN03G2547 Fragaria x ananassa HOM05D007655 ORTHO05D009698 5.5e-30 136.0 327 45.3
Sc14g0002050 Simmondsia chinensis HOM05D007655 ORTHO05D009698 7.2e-30 135.6 300 42.0
ECA232G4997 Erigeron canadensis HOM05D007655 ORTHO05D009698 9.4e-30 135.2 307 43.6
Lalb_Chr19g0131421 Lupinus albus HOM05D007655 ORTHO05D009698 2.1e-29 134.0 169 42.0
AT2G40240 Arabidopsis thaliana HOM05D007655 ORTHO05D009698 3.0e-28 130.2 294 43.9
Solyc03g095960.1 Solanum lycopersicum HOM05D007655 ORTHO05D009698 6.8e-28 129.0 318 39.0
Duzib106G0934 Durio zibethinus HOM05D007655 ORTHO05D009698 1.5e-27 127.9 332 40.7
Peaxi162Scf00304g00006 Petunia axillaris HOM05D007655 ORTHO05D009698 1.5e-27 127.9 287 30.0
Sopen03g025960 Solanum pennellii HOM05D007655 ORTHO05D009698 3.4e-27 126.7 318 38.1
PGSC0003DMG400027723 Solanum tuberosum HOM05D007655 ORTHO05D009698 3.4e-27 126.7 320 36.9
GSVIVG01032781001 Vitis vinifera HOM05D007655 ORTHO05D009698 3.7e-26 123.2 154 44.2
CARHR135280 Cardamine hirsuta HOM05D007655 ORTHO05D009698 8.3e-26 122.1 325 40.6
Nitab4.5_0006468g0020 Nicotiana tabacum HOM05D007655 ORTHO05D009698 8.3e-26 122.1 320 37.8
AL4G37960 Arabidopsis lyrata HOM05D007655 ORTHO05D009698 1.1e-25 121.7 323 41.5
Carub.0004s2246 Capsella rubella HOM05D007655 ORTHO05D009698 1.4e-25 121.3 283 44.5
Rhsim09G0178900 Rhododendron simsii HOM05D007655 ORTHO05D009698 3.1e-25 120.2 313 42.2
Sopen03g025950 Solanum pennellii HOM05D007655 ORTHO05D009698 3.5e-24 116.7 323 36.8
CSS0030670 Camellia sinensis var. sinensis HOM05D007655 ORTHO05D009698 2.3e-23 114.0 182 58.2
Haze_17251 Corylus avellana HOM05D007655 ORTHO05D009698 2.8e-21 107.1 138 42.8
MBI15_g28821_MAGBIO Magnolia biondii HOM05D007655 ORTHO05D009698 1.0e-20 105.1 296 40.5
vmacro10028 Vaccinium macrocarpon HOM05D007655 ORTHO05D009698 6.8e-20 102.4 328 39.6
Migut.F01479 Erythranthe guttata HOM05D007655 ORTHO05D009698 3.4e-19 100.1 297 39.7
THA.LOC104810115 Tarenaya hassleriana HOM05D007655 ORTHO05D009698 2.2e-18 97.4 326 38.7
FAN01G0024 Fragaria x ananassa HOM05D007655 ORTHO05D009698 3.7e-18 96.7 185 56.2
SalBow5G5388 Salvia bowleyana HOM05D007655 ORTHO05D009698 1.6e-16 91.3 130 43.8
Oeu029071.1 Olea europaea HOM05D007655 ORTHO05D009698 2.7e-16 90.5 117 44.4
ATR0174G045 Amborella trichopoda HOM05D007655 ORTHO05D009698 3.9e-15 86.7 140 35.0
Lsat_1_v5_gn_9_61061 Lactuca sativa HOM05D007655 ORTHO05D009698 8.6e-15 85.5 138 35.5
CDE12G0438 Ceratophyllum demersum HOM05D007655 ORTHO05D009698 5.6e-14 82.8 149 31.5
CDE06G0331 Ceratophyllum demersum HOM05D007655 ORTHO05D009698 9.5e-14 82.0 102 37.3
Nn2g13207 Nelumbo nucifera HOM05D007655 ORTHO05D009698 1.8e-12 77.8 81 49.4
Potri.008G141700 Populus trichocarpa HOM05D007655 ORTHO05D009698 1.7e-10 71.2 176 29.5
arahy.Tifrunner.gnm1.ann1.AV2QAA Arachis hypogaea HOM05D000023 ORTHO05D000014 3.7e-10 70.1 64 50.0
CDE04G2579 Ceratophyllum demersum HOM05D007655 ORTHO05D009698 1.6e-08 64.7 100 35.0
Gorai.001G205200 Gossypium raimondii HOM05D007655 ORTHO05D009698 5.6e-06 56.2 110 31.8
Gohir.D07G184750 Gossypium hirsutum HOM05D007655 ORTHO05D009698 9.5e-06 55.5 114 31.6


User provided reference genes

Program Settings