Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0024450 Lotus japonicus HOM05D007051 ORTHO05D008842 1.2e-124 449.9 243 100.0
Ca_06694_v3 Cicer arietinum L. HOM05D007051 ORTHO05D008842 1.7e-94 349.7 243 78.2
Glyma.11G030400 Glycine max HOM05D007051 ORTHO05D008842 3.9e-94 348.6 243 77.8
Prupe.5G077000 Prunus persica HOM05D007051 ORTHO05D008842 1.3e-92 343.6 244 75.4
QL12p014185 Quercus lobata HOM05D007051 ORTHO05D008842 2.1e-92 342.8 242 74.8
arahy.Tifrunner.gnm1.ann1.2BY1CI Arachis hypogaea HOM05D007051 ORTHO05D008842 8.1e-92 340.9 245 75.9
Psat2g179120 Pisum sativum HOM05D007051 ORTHO05D008842 2.4e-91 339.3 243 73.3
Hma1.2p1_1868F.1_g305950 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 3.1e-91 339.0 242 74.8
CiPaw.12G105800 Carya illinoinensis HOM05D007051 ORTHO05D008842 5.3e-91 338.2 244 75.0
arahy.Tifrunner.gnm1.ann1.BK8PZK Arachis hypogaea HOM05D007051 ORTHO05D008842 6.9e-91 337.8 245 75.5
Medtr5g011990 Medicago truncatula HOM05D007051 ORTHO05D008842 9.0e-91 337.4 252 75.0
CSS0029957 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 1.2e-90 337.0 241 74.7
CSS0034738 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 3.4e-90 335.5 248 75.0
MD04G1081100 Malus domestica HOM05D007051 ORTHO05D008842 4.5e-90 335.1 241 74.7
PGR031G0283 Punica granatum HOM05D007051 ORTHO05D008842 4.5e-90 335.1 243 73.7
Atru.chr9.1399 Acer truncatum HOM05D007051 ORTHO05D008842 3.2e-88 328.9 243 72.0
FAN04G1713 Fragaria x ananassa HOM05D007051 ORTHO05D008842 7.1e-88 327.8 244 73.8
FAN08G0417 Fragaria x ananassa HOM05D007051 ORTHO05D008842 9.3e-88 327.4 244 73.0
FAN18G1307 Fragaria x ananassa HOM05D007051 ORTHO05D008842 9.3e-88 327.4 244 73.0
VMungo1215G1548 Vigna mungo HOM05D007051 ORTHO05D008842 1.2e-87 327.0 243 72.4
Duzib205G0440 Durio zibethinus HOM05D007051 ORTHO05D008842 4.6e-87 325.1 243 70.0
Dinv21586 Davidia involucrata HOM05D007051 ORTHO05D008842 6.0e-87 324.7 242 71.1
Phvul.002G060700 Phaseolus vulgaris HOM05D007051 ORTHO05D008842 6.0e-87 324.7 243 72.8
SGA_v2.0_scaffold120G32840 Striga asiatica HOM05D007051 ORTHO05D008842 6.0e-87 324.7 235 72.3
Manes.01G074700 Manihot esculenta HOM05D007051 ORTHO05D008842 7.9e-87 324.3 244 71.7
MELO3C005568.2 Cucumis melo HOM05D007051 ORTHO05D008842 1.0e-86 323.9 243 71.6
FAN13G2377 Fragaria x ananassa HOM05D007051 ORTHO05D008842 1.0e-86 323.9 253 71.1
ClCG01G003730 Citrullus lanatus HOM05D007051 ORTHO05D008842 4.3e-85 318.5 246 69.9
Eucgr.D02017 Eucalyptus grandis HOM05D007051 ORTHO05D008842 5.6e-85 318.2 243 69.1
Cc08_g13070 Coffea canephora HOM05D007051 ORTHO05D008842 2.8e-84 315.8 219 73.5
CANSAT21G0170 Cannabis sativa HOM05D007051 ORTHO05D008842 6.2e-84 314.7 243 70.0
CsaV3_5G003870 Cucumis sativus L. HOM05D007051 ORTHO05D008842 8.1e-84 314.3 243 69.1
Lalb_Chr09g0324461 Lupinus albus HOM05D007051 ORTHO05D008842 1.1e-83 313.9 247 68.8
TWI60G1677 Tripterygium wilfordii HOM05D007051 ORTHO05D008842 1.1e-83 313.9 243 70.0
SalBow6G1069 Salvia bowleyana HOM05D007051 ORTHO05D008842 1.8e-83 313.2 219 72.1
GSVIVG01006029001 Vitis vinifera HOM05D007051 ORTHO05D008842 1.8e-83 313.2 243 68.7
Gohir.A11G020000 Gossypium hirsutum HOM05D007051 ORTHO05D008842 3.1e-83 312.4 243 67.9
THA.LOC104809449 Tarenaya hassleriana HOM05D007051 ORTHO05D008842 3.1e-83 312.4 243 69.5
Sc01g0009270 Simmondsia chinensis HOM05D007051 ORTHO05D008842 4.0e-83 312.0 244 70.9
Migut.A00866 Erythranthe guttata HOM05D007051 ORTHO05D008842 9.0e-83 310.8 237 68.4
TAR629G3399 Trochodendron aralioides HOM05D007051 ORTHO05D008842 9.0e-83 310.8 237 70.9
Ciclev10021945m.g Citrus clementina HOM05D007051 ORTHO05D008842 2.0e-82 309.7 243 67.9
unitig_699.g19761 Utricularia gibba HOM05D001703 ORTHO05D007194 3.4e-82 308.9 233 69.5
Gorai.007G021000 Gossypium raimondii HOM05D007051 ORTHO05D008842 9.9e-82 307.4 243 67.5
Lsat_1_v5_gn_3_2541 Lactuca sativa HOM05D007051 ORTHO05D008842 1.3e-81 307.0 243 67.1
Gohir.D11G019700 Gossypium hirsutum HOM05D007051 ORTHO05D008842 1.7e-81 306.6 241 67.2
AL2G13010 Arabidopsis lyrata HOM05D007051 ORTHO05D008842 2.9e-81 305.8 245 66.9
DCAR_006807 Daucus carota HOM05D007051 ORTHO05D008842 1.1e-80 303.9 244 66.0
Potri.001G119100 Populus trichocarpa HOM05D007051 ORTHO05D008842 1.4e-80 303.5 212 74.5
vmacro14055 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 1.9e-80 303.1 208 75.0
AT1G62780 Arabidopsis thaliana HOM05D007051 ORTHO05D008842 2.5e-80 302.8 245 66.1
Actinidia27438 Actinidia chinensis HOM05D007051 ORTHO05D008842 5.5e-80 301.6 235 69.4
RcHm_v2.0_Chr7g0202061 Rosa chinensis HOM05D007051 ORTHO05D008842 5.5e-80 301.6 243 67.5
MSTRG.12072 Avicennia marina HOM05D007051 ORTHO05D008842 1.2e-79 300.4 219 68.9
Peaxi162Scf00002g00416 Petunia axillaris HOM05D007051 ORTHO05D008842 1.2e-79 300.4 221 68.8
Nitab4.5_0004482g0060 Nicotiana tabacum HOM05D007051 ORTHO05D008842 1.6e-79 300.1 237 67.9
FvH4_5g00440 Fragaria vesca HOM05D007051 ORTHO05D008842 2.7e-79 299.3 204 77.0
ATR0665G189 Amborella trichopoda HOM05D007051 ORTHO05D008842 3.5e-79 298.9 215 69.8
Solyc08g079240.4 Solanum lycopersicum HOM05D007051 ORTHO05D008842 4.6e-79 298.5 247 66.4
Sopen08g027680 Solanum pennellii HOM05D007051 ORTHO05D008842 1.0e-78 297.4 247 66.0
Sabra01G0092000 Salix brachista HOM05D007051 ORTHO05D008842 5.1e-78 295.0 243 66.7
CAN.G1337.17 Capsicum annuum HOM05D007051 ORTHO05D008842 8.7e-78 294.3 248 64.5
CARHR049060 Cardamine hirsuta HOM05D007051 ORTHO05D008842 8.7e-78 294.3 245 64.5
CDE02G0603 Ceratophyllum demersum HOM05D007051 ORTHO05D008842 8.7e-78 294.3 239 64.4
Thhalv10023664m.g Eutrema salsugineum HOM05D007051 ORTHO05D008842 8.7e-78 294.3 238 65.1
Hund11573 Selenicereus undatus HOM05D007051 ORTHO05D008842 1.1e-77 293.9 245 65.3
Haze_08593 Corylus avellana HOM05D007051 ORTHO05D008842 1.5e-77 293.5 222 72.1
Nitab4.5_0010733g0020 Nicotiana tabacum HOM05D007051 ORTHO05D008842 1.5e-77 293.5 245 64.5
Sp2g01860 Schrenkiella parvula HOM05D007051 ORTHO05D008842 2.5e-77 292.7 243 65.0
PSO675G3044 Papaver somniferum HOM05D007051 ORTHO05D008842 4.3e-77 292.0 239 65.7
C09p19230 Brassica napus HOM05D007051 ORTHO05D008842 9.6e-77 290.8 238 64.7
PGSC0003DMG400004734 Solanum tuberosum HOM05D007051 ORTHO05D008842 9.6e-77 290.8 245 64.9
Aa31LG2G320 Aethionema arabicum HOM05D007051 ORTHO05D008842 1.3e-76 290.4 243 63.4
BcaC04g22447 Brassica carinata HOM05D007051 ORTHO05D008842 2.1e-76 289.7 238 64.3
A09p15970 Brassica napus HOM05D007051 ORTHO05D008842 2.8e-76 289.3 238 64.3
BraA09t37232Z Brassica rapa HOM05D007051 ORTHO05D008842 2.8e-76 289.3 238 64.3
BcaB07g31359 Brassica carinata HOM05D007051 ORTHO05D008842 6.2e-76 288.1 238 64.3
PSO717G0094 Papaver somniferum HOM05D007051 ORTHO05D008842 1.1e-75 287.3 252 63.5
BolC9t54830H Brassica oleracea HOM05D007051 ORTHO05D008842 1.4e-75 287.0 238 64.3
AUR62007459 Chenopodium quinoa HOM05D007051 ORTHO05D008842 1.8e-75 286.6 244 65.2
Oeu024055.1 Olea europaea HOM05D007051 ORTHO05D008842 1.2e-74 283.9 224 67.0
Carub.0002s0220 Capsella rubella HOM05D007051 ORTHO05D008842 5.8e-74 281.6 255 61.6
AUR62039918 Chenopodium quinoa HOM05D007051 ORTHO05D008842 1.0e-73 280.8 245 64.1
Sed0010491 Sechium edule HOM05D007051 ORTHO05D008842 2.9e-73 279.3 237 64.1
Nn6g34078 Nelumbo nucifera HOM05D007051 ORTHO05D008842 9.3e-72 274.2 208 67.3
Os04g0105700 Oryza sativa ssp. japonica HOM05D007051 ORTHO05D008842 1.0e-70 270.8 227 60.4
MBI04_g42034_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 5.1e-70 268.5 237 62.9
MBI04_g32270_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 8.7e-70 267.7 233 63.9
TPR.G820 Trifolium pratense HOM05D007051 ORTHO05D008842 8.7e-70 267.7 247 65.2
HanXRQChr17g0549011 Helianthus annuus HOM05D007051 ORTHO05D008842 1.1e-69 267.3 243 61.3
Aqoxy7G00687 Aquilegia oxysepala HOM05D007051 ORTHO05D008842 1.3e-68 263.8 237 61.2
Zm00001eb300480 Zea mays HOM05D007051 ORTHO05D008842 1.1e-67 260.8 226 58.4
ECA246G0398 Erigeron canadensis HOM05D007051 ORTHO05D008842 3.8e-65 252.3 220 60.5
SEGI_34604 Sequoiadendron giganteum HOM05D007051 ORTHO05D008842 3.9e-62 242.3 250 54.4
Thecc.03G259200 Theobroma cacao HOM05D007051 ORTHO05D008842 5.1e-62 241.9 192 66.7
Hma1.2p1_1868F.1_g305940 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 1.1e-59 234.2 172 71.5
Pp3c10_11840 Physcomitrium patens HOM05D007051 ORTHO05D008842 1.4e-59 233.8 220 55.5
HPP92_015062 Vanilla planifolia HOM05D007051 ORTHO05D008842 7.7e-58 228.0 220 55.0
AagrBONN_evm.TU.Sc2ySwM_362.1892 Anthoceros agrestis HOM05D007051 ORTHO05D008842 6.5e-57 224.9 206 57.3
Glyma.01G211400 Glycine max HOM05D007051 ORTHO05D008842 1.5e-50 203.8 243 56.4
SMO367G0716 Selaginella moellendorffii HOM05D007051 ORTHO05D008842 1.1e-48 197.6 227 47.6
Duzib084G0812 Durio zibethinus HOM05D007051 ORTHO05D008842 7.2e-40 168.3 163 57.1
Mapoly0062s0102 Marchantia polymorpha HOM05D007051 ORTHO05D008842 3.0e-38 162.9 236 43.2
Hma1.2p1_2244F.1_g317930 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 4.4e-37 159.1 99 84.8
Cpa.g.sc29.111 Carica papaya HOM05D007051 ORTHO05D008842 1.0e-33 147.9 119 65.5
Cre13.g579550 Chlamydomonas reinhardtii HOM05D007051 ORTHO05D008842 2.2e-28 130.2 241 37.3
EL10Ac5g12994 Beta vulgaris HOM05D007051 ORTHO05D008842 1.8e-27 127.1 120 63.3
vmacro16051 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 5.0e-25 119.0 79 79.7
PRCOL_00000809 Prasinoderma coloniale HOM05D007051 ORTHO05D008842 9.2e-19 98.2 186 34.9
arahy.Tifrunner.gnm1.ann1.VE7KXP Arachis hypogaea HOM05D007051 ORTHO05D008842 1.2e-13 81.3 66 65.2
MCO02G329 Micromonas commoda HOM05D007051 ORTHO05D008842 2.6e-13 80.1 210 28.6
Oeu056087.1 Olea europaea HOM05D007051 ORTHO05D008842 1.3e-09 67.8 52 65.4
Glyma.05G077300 Glycine max HOM05D007051 ORTHO05D008842 3.9e-09 66.2 60 65.0


User provided reference genes

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