Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0023828 Lotus japonicus HOM05D005603 ORTHO05D006944 1.3e-246 855.9 410 100.0
Glyma.01G168600 Glycine max HOM05D005603 ORTHO05D006944 7.2e-234 813.5 410 95.4
Glyma.11G074800 Glycine max HOM05D005603 ORTHO05D006944 8.8e-232 806.6 410 94.6
Ca_24898_v3 Cicer arietinum L. HOM05D005603 ORTHO05D006944 1.2e-231 806.2 410 94.4
TPR.G2333 Trifolium pratense HOM05D005603 ORTHO05D006944 9.7e-231 803.1 410 93.9
Medtr5g021520 Medicago truncatula HOM05D005603 ORTHO05D006944 2.8e-230 801.6 411 94.2
Phvul.002G111500 Phaseolus vulgaris HOM05D005603 ORTHO05D006944 1.4e-229 799.3 410 93.4
Psat2g155920 Pisum sativum HOM05D005603 ORTHO05D006944 1.6e-228 795.8 410 93.7
arahy.Tifrunner.gnm1.ann1.V913IW Arachis hypogaea HOM05D005603 ORTHO05D006944 2.0e-228 795.4 410 93.4
VMungo1215G2039 Vigna mungo HOM05D005603 ORTHO05D006944 3.5e-228 794.7 409 92.9
arahy.Tifrunner.gnm1.ann1.8YZ064 Arachis hypogaea HOM05D005603 ORTHO05D006944 8.8e-224 780.0 439 87.2
COL.COLO4_21962 Corchorus olitorius HOM05D005603 ORTHO05D006944 2.9e-219 765.0 410 89.5
Prupe.7G165200 Prunus persica HOM05D005603 ORTHO05D006944 1.9e-218 762.3 410 89.0
QL06p033966 Quercus lobata HOM05D005603 ORTHO05D006944 5.5e-218 760.8 409 89.5
Eucgr.I02369 Eucalyptus grandis HOM05D005603 ORTHO05D006944 1.6e-217 759.2 410 88.5
MD15G1249000 Malus domestica HOM05D005603 ORTHO05D006944 8.0e-217 756.9 409 88.5
Thecc.01G023100 Theobroma cacao HOM05D005603 ORTHO05D006944 1.4e-216 756.1 410 88.5
Gohir.D03G010900 Gossypium hirsutum HOM05D005603 ORTHO05D006944 6.8e-216 753.8 410 88.0
Gorai.003G011300 Gossypium raimondii HOM05D005603 ORTHO05D006944 6.8e-216 753.8 410 88.0
Gohir.A02G169100 Gossypium hirsutum HOM05D005603 ORTHO05D006944 1.2e-215 753.1 410 87.8
CiPaw.07G056000 Carya illinoinensis HOM05D005603 ORTHO05D006944 1.5e-215 752.7 411 88.8
Sopen02g029190 Solanum pennellii HOM05D005603 ORTHO05D006944 2.0e-215 752.3 409 87.0
Manes.02G101300 Manihot esculenta HOM05D005603 ORTHO05D006944 2.2e-214 748.8 408 88.7
FvH4_1g12160 Fragaria vesca HOM05D005603 ORTHO05D006944 3.7e-214 748.0 410 87.1
Nitab4.5_0008176g0030 Nicotiana tabacum HOM05D005603 ORTHO05D006944 1.4e-213 746.1 424 84.0
TWI09G0997 Tripterygium wilfordii HOM05D005603 ORTHO05D006944 1.8e-213 745.7 409 87.0
CSS0040106 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 4.1e-213 744.6 410 87.3
Aqoxy5G01490 Aquilegia oxysepala HOM05D005603 ORTHO05D006944 9.2e-213 743.4 408 86.5
Nn5g29214 Nelumbo nucifera HOM05D005603 ORTHO05D006944 1.2e-212 743.0 410 85.9
Sc03g0003440 Simmondsia chinensis HOM05D005603 ORTHO05D006944 1.2e-212 743.0 408 86.3
Potri.005G117200 Populus trichocarpa HOM05D005603 ORTHO05D006944 2.7e-212 741.9 408 87.5
MELO3C007885.2 Cucumis melo HOM05D005603 ORTHO05D006944 3.5e-212 741.5 410 85.9
CsaV3_6G046890 Cucumis sativus L. HOM05D005603 ORTHO05D006944 3.5e-212 741.5 410 86.1
HanXRQChr16g0531111 Helianthus annuus HOM05D005603 ORTHO05D006944 3.5e-212 741.5 408 85.8
MD02G1111100 Malus domestica HOM05D005603 ORTHO05D006944 4.5e-212 741.1 409 86.8
ClCG01G020120 Citrullus lanatus HOM05D005603 ORTHO05D006944 5.9e-212 740.7 409 86.1
Sed0002868 Sechium edule HOM05D005603 ORTHO05D006944 3.9e-211 738.0 409 85.8
RcHm_v2.0_Chr2g0099911 Rosa chinensis HOM05D005603 ORTHO05D006944 5.0e-211 737.6 410 87.1
CANSAT01G2298 Cannabis sativa HOM05D005603 ORTHO05D006944 8.6e-211 736.9 407 86.5
Hma1.2p1_0743F.1_g211450 Hydrangea macrophylla HOM05D005603 ORTHO05D006944 3.3e-210 734.9 421 85.0
AUR62007651 Chenopodium quinoa HOM05D005603 ORTHO05D006944 1.2e-209 733.0 408 85.3
SGA_v2.0_scaffold47G17673 Striga asiatica HOM05D005603 ORTHO05D006944 2.1e-209 732.3 415 85.1
Potri.007G015800 Populus trichocarpa HOM05D005603 ORTHO05D006944 3.6e-209 731.5 409 86.1
Hund14030 Selenicereus undatus HOM05D005603 ORTHO05D006944 5.2e-208 727.6 408 84.3
MSTRG.15764 Avicennia marina HOM05D005603 ORTHO05D006944 6.8e-208 727.2 409 84.4
TAR628G0819 Trochodendron aralioides HOM05D005603 ORTHO05D006944 6.8e-208 727.2 410 85.6
GSVIVG01018824001 Vitis vinifera HOM05D005603 ORTHO05D006944 6.8e-208 727.2 397 88.2
Lsat_1_v5_gn_3_73720 Lactuca sativa HOM05D005603 ORTHO05D006944 1.5e-207 726.1 402 84.8
THA.LOC104819186 Tarenaya hassleriana HOM05D005603 ORTHO05D006944 1.5e-207 726.1 409 84.8
Duzib147G0771 Durio zibethinus HOM05D005603 ORTHO05D006944 3.4e-207 724.9 397 87.4
Ciclev10025760m.g Citrus clementina HOM05D005603 ORTHO05D006944 4.4e-207 724.5 408 84.3
Nitab4.5_0000912g0020 Nicotiana tabacum HOM05D005603 ORTHO05D006944 9.8e-207 723.4 416 83.7
Peaxi162Scf00083g01233 Petunia axillaris HOM05D005603 ORTHO05D006944 2.2e-206 722.2 402 85.6
PGSC0003DMG400003547 Solanum tuberosum HOM05D005603 ORTHO05D006944 2.9e-206 721.8 395 86.3
TAR376G0194 Trochodendron aralioides HOM05D005603 ORTHO05D006944 6.4e-206 720.7 410 84.9
Aa31LG4G19220 Aethionema arabicum HOM05D005603 ORTHO05D006944 1.4e-205 719.5 411 83.5
DCAR_021493 Daucus carota HOM05D005603 ORTHO05D006944 4.1e-205 718.0 411 84.2
CDE05G2538 Ceratophyllum demersum HOM05D005603 ORTHO05D006944 9.2e-205 716.8 409 84.8
Cc07_g10420 Coffea canephora HOM05D005603 ORTHO05D006944 9.2e-205 716.8 397 85.9
AT3G51130 Arabidopsis thaliana HOM05D005603 ORTHO05D006944 1.6e-204 716.1 411 82.0
EL10As8g23850 Beta vulgaris HOM05D005603 ORTHO05D006944 2.7e-204 715.3 403 84.6
Hund16476 Selenicereus undatus HOM05D005603 ORTHO05D006944 3.5e-204 714.9 439 79.5
AL5G31550 Arabidopsis lyrata HOM05D005603 ORTHO05D006944 4.6e-204 714.5 410 82.0
PSO541G2355 Papaver somniferum HOM05D005603 ORTHO05D006944 4.6e-204 714.5 409 83.6
PSO675G2068 Papaver somniferum HOM05D005603 ORTHO05D006944 4.6e-204 714.5 409 83.6
ATR0620G128 Amborella trichopoda HOM05D005603 ORTHO05D006944 1.3e-203 713.0 410 83.2
Migut.L00039 Erythranthe guttata HOM05D005603 ORTHO05D006944 1.3e-203 713.0 409 83.1
SalBow8G5567 Salvia bowleyana HOM05D005603 ORTHO05D006944 1.3e-203 713.0 420 82.1
ECA246G4842 Erigeron canadensis HOM05D005603 ORTHO05D006944 2.3e-203 712.2 396 85.4
CSS0042462 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 3.0e-203 711.8 408 84.1
Thhalv10010418m.g Eutrema salsugineum HOM05D005603 ORTHO05D006944 3.9e-203 711.4 411 81.5
Carub.0005s1753 Capsella rubella HOM05D005603 ORTHO05D006944 8.6e-203 710.3 411 81.3
Oeu035330.1 Olea europaea HOM05D005603 ORTHO05D006944 1.1e-202 709.9 409 82.9
CSS0001882 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 3.3e-202 708.4 408 83.6
Haze_03808 Corylus avellana HOM05D005603 ORTHO05D006944 4.7e-201 704.5 403 84.9
FAN28G0526 Fragaria x ananassa HOM05D005603 ORTHO05D006944 1.5e-199 699.5 410 83.2
Sed0017160 Sechium edule HOM05D005603 ORTHO05D006944 2.0e-199 699.1 412 82.0
Sp5g11080 Schrenkiella parvula HOM05D005603 ORTHO05D006944 1.7e-198 696.0 411 80.5
BcaC06g33053 Brassica carinata HOM05D005603 ORTHO05D006944 2.2e-198 695.7 409 81.2
CAN.G358.2 Capsicum annuum HOM05D005603 ORTHO05D006944 4.9e-198 694.5 397 82.9
Rhsim08G0035200 Rhododendron simsii HOM05D005603 ORTHO05D006944 9.2e-197 690.3 421 79.8
CARHR160730 Cardamine hirsuta HOM05D005603 ORTHO05D006944 1.6e-196 689.5 411 78.8
Os06g0714000 Oryza sativa ssp. japonica HOM05D005603 ORTHO05D006944 7.8e-196 687.2 406 81.3
FAN23G1635 Fragaria x ananassa HOM05D005603 ORTHO05D006944 1.7e-195 686.0 404 82.4
Cpa.g.sc6.214 Carica papaya HOM05D005603 ORTHO05D006944 6.6e-195 684.1 427 79.6
A03p48150 Brassica napus HOM05D005603 ORTHO05D006944 9.5e-194 680.2 393 81.2
BraA03t13922Z Brassica rapa HOM05D005603 ORTHO05D006944 9.5e-194 680.2 393 81.2
TWI53G1238 Tripterygium wilfordii HOM05D005603 ORTHO05D006944 2.3e-192 675.6 373 86.9
HPP92_025419 Vanilla planifolia HOM05D005603 ORTHO05D006944 2.3e-192 675.6 407 80.6
BolC7t45134H Brassica oleracea HOM05D005603 ORTHO05D006944 1.5e-191 672.9 395 80.8
FAN19G0288 Fragaria x ananassa HOM05D005603 ORTHO05D006944 1.7e-190 669.5 394 82.5
MSTRG.3829 Avicennia marina HOM05D005603 ORTHO05D006944 4.6e-188 661.4 409 78.2
C07p46180 Brassica napus HOM05D005603 ORTHO05D006944 6.6e-187 657.5 416 76.4
BraA09t39879Z Brassica rapa HOM05D005603 ORTHO05D006944 8.6e-187 657.1 394 78.2
Lj4C215G4 Lonicera japonica HOM05D005603 ORTHO05D006944 1.5e-186 656.4 409 78.2
A09p44190 Brassica napus HOM05D005603 ORTHO05D006944 1.9e-186 656.0 394 77.9
FAN26G2705 Fragaria x ananassa HOM05D005603 ORTHO05D006944 1.9e-186 656.0 387 82.4
BolC8t50258H Brassica oleracea HOM05D005603 ORTHO05D006944 5.6e-186 654.4 394 78.4
Sabra05G0096200 Salix brachista HOM05D005603 ORTHO05D006944 1.2e-185 653.3 417 78.9
Duzib264G0505 Durio zibethinus HOM05D005603 ORTHO05D006944 3.6e-185 651.7 410 79.3
unitig_32.g11821 Utricularia gibba HOM05D005603 ORTHO05D006944 6.2e-185 651.0 392 79.8
BcaB01g00547 Brassica carinata HOM05D005603 ORTHO05D006944 2.2e-182 642.5 382 79.1
vmacro22086 Vaccinium macrocarpon HOM05D005603 ORTHO05D006944 2.4e-181 639.0 363 82.9
Sabra07G0013000 Salix brachista HOM05D005603 ORTHO05D006944 1.2e-180 636.7 410 77.1
Zm00001eb227930 Zea mays HOM05D005603 ORTHO05D006944 1.7e-179 632.9 406 75.6
Lalb_Chr16g0377611 Lupinus albus HOM05D005603 ORTHO05D006944 5.6e-178 627.9 336 87.5
C08p26410 Brassica napus HOM05D005603 ORTHO05D006944 2.4e-173 612.5 363 79.3
vmacro18394 Vaccinium macrocarpon HOM05D005603 ORTHO05D006944 3.2e-173 612.1 366 79.8
Ah.02g124640 Amaranthus hybridus HOM05D005603 ORTHO05D006944 1.6e-164 583.2 402 71.4
Pp3c2_6370 Physcomitrium patens HOM05D005603 ORTHO05D006944 1.0e-163 580.5 398 68.6
AagrBONN_evm.TU.Sc2ySwM_228.543 Anthoceros agrestis HOM05D005603 ORTHO05D006944 1.6e-161 573.2 403 69.5
SMO117G0153 Selaginella moellendorffii HOM05D005603 ORTHO05D006944 1.6e-161 573.2 405 67.9
Pp3c10_8990 Physcomitrium patens HOM05D005603 ORTHO05D006944 2.6e-159 565.8 401 67.1
Dinv40059 Davidia involucrata HOM05D005603 ORTHO05D006944 3.2e-157 558.9 307 87.0
Dinv33602 Davidia involucrata HOM05D005603 ORTHO05D006944 5.5e-157 558.1 306 85.6
Actinidia31012 Actinidia chinensis HOM05D005603 ORTHO05D006944 1.8e-152 543.1 307 83.7
SEGI_22640 Sequoiadendron giganteum HOM05D005603 ORTHO05D006944 1.6e-148 530.0 351 72.6
Mapoly0152s0028 Marchantia polymorpha HOM05D005603 ORTHO05D006944 2.5e-146 522.7 405 63.5
Mapoly0094s0075 Marchantia polymorpha HOM05D005603 ORTHO05D006944 1.6e-140 503.4 398 61.8
Lalb_Chr09g0321921 Lupinus albus HOM05D005603 ORTHO05D006944 2.3e-131 473.0 242 94.2
Solyc02g075630.3 Solanum lycopersicum HOM05D005603 ORTHO05D006944 2.0e-103 380.2 209 86.1
SMO037G0002 Selaginella moellendorffii HOM05D005603 ORTHO05D006944 7.7e-103 378.3 271 66.1
Atru.chr3.766 Acer truncatum HOM05D005603 ORTHO05D006944 6.2e-92 342.0 195 83.1
Nn015s41468 Nelumbo nucifera HOM05D005603 ORTHO05D006944 3.3e-85 319.7 171 85.4
Actinidia26078 Actinidia chinensis HOM05D005603 ORTHO05D006944 9.5e-85 318.2 222 74.3
Migut.H02480 Erythranthe guttata HOM05D005603 ORTHO05D006944 1.1e-83 314.7 378 50.3
Lalb_Chr09g0321931 Lupinus albus HOM05D005603 ORTHO05D006944 4.0e-83 312.8 166 87.3
PRCOL_00000516 Prasinoderma coloniale HOM05D005603 ORTHO05D006944 6.8e-75 285.4 445 38.9
CBR_g36682 Chara braunii HOM05D005603 ORTHO05D000002 2.6e-74 283.5 229 59.4
Nn015s41469 Nelumbo nucifera HOM05D005603 ORTHO05D006944 5.1e-70 269.2 146 84.2
CBR_g36680 Chara braunii HOM05D005603 ORTHO05D006944 3.8e-57 226.5 172 62.8
BcaC06g33054 Brassica carinata HOM05D005603 ORTHO05D006944 3.2e-56 223.4 146 73.3
Atru.chr2.40 Acer truncatum HOM05D005603 ORTHO05D006944 4.0e-43 179.9 195 52.8
Actinidia31013 Actinidia chinensis HOM05D005603 ORTHO05D006944 1.0e-30 138.7 77 87.0
RcHm_v2.0_Chr7g0231521 Rosa chinensis HOM05D005603 ORTHO05D006944 4.3e-21 106.7 203 39.9
Cfa027245 Carpinus fangiana HOM05D005603 ORTHO05D006944 8.8e-14 82.4 279 28.3
COL.COLO4_32114 Corchorus olitorius HOM05D000931 ORTHO05D002226 2.1e-07 61.2 53 56.6


User provided reference genes

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