Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0023614 Lotus japonicus HOM05D005960 ORTHO05D007537 1.8e-262 908.7 452 100.0
VMungo0464G0831 Vigna mungo HOM05D005960 ORTHO05D007537 1.8e-238 828.9 450 90.9
Phvul.004G033300 Phaseolus vulgaris HOM05D005960 ORTHO05D007537 1.3e-236 822.8 452 90.7
Glyma.19G027400 Glycine max HOM05D005960 ORTHO05D007537 8.5e-236 820.1 452 90.5
Glyma.13G059000 Glycine max HOM05D005960 ORTHO05D007537 1.9e-235 818.9 452 90.3
TPR.G26197 Trifolium pratense HOM05D005960 ORTHO05D007537 1.5e-232 809.3 452 89.8
Ca_04868_v3 Cicer arietinum L. HOM05D005960 ORTHO05D007537 1.7e-231 805.8 452 88.9
arahy.Tifrunner.gnm1.ann1.8N3EDT Arachis hypogaea HOM05D005960 ORTHO05D007537 6.3e-231 803.9 460 87.8
Psat1g068640 Pisum sativum HOM05D005960 ORTHO05D007537 5.3e-230 800.8 452 87.8
arahy.Tifrunner.gnm1.ann1.7U9LX7 Arachis hypogaea HOM05D005960 ORTHO05D007537 7.0e-230 800.4 460 87.6
Medtr6g013750 Medicago truncatula HOM05D005960 ORTHO05D007537 1.3e-228 796.2 452 88.1
Cfa007624 Carpinus fangiana HOM05D005960 ORTHO05D007537 1.2e-226 789.6 454 85.7
TAR371G0518 Trochodendron aralioides HOM05D005960 ORTHO05D007537 1.3e-220 769.6 452 83.8
Lalb_Chr06g0175111 Lupinus albus HOM05D005960 ORTHO05D007537 8.5e-220 766.9 458 84.7
CiPaw.04G058500 Carya illinoinensis HOM05D005960 ORTHO05D007537 1.2e-218 763.1 452 83.8
Manes.01G099100 Manihot esculenta HOM05D005960 ORTHO05D007537 1.2e-218 763.1 453 82.8
GSVIVG01011490001 Vitis vinifera HOM05D005960 ORTHO05D007537 8.0e-218 760.4 453 83.7
QL02p039732 Quercus lobata HOM05D005960 ORTHO05D007537 1.4e-217 759.6 461 82.6
FvH4_6g47510 Fragaria vesca HOM05D005960 ORTHO05D007537 1.8e-217 759.2 454 83.9
Atru.chr8.386 Acer truncatum HOM05D005960 ORTHO05D007537 3.0e-217 758.4 454 83.5
PGR004G2687 Punica granatum HOM05D005960 ORTHO05D007537 6.8e-217 757.3 456 82.7
QL02p039477 Quercus lobata HOM05D005960 ORTHO05D007537 6.8e-217 757.3 461 82.4
FAN05G2671 Fragaria x ananassa HOM05D005960 ORTHO05D007537 1.2e-216 756.5 454 83.7
RcHm_v2.0_Chr2g0166541 Rosa chinensis HOM05D005960 ORTHO05D007537 1.5e-216 756.1 454 83.9
Eucgr.I01985 Eucalyptus grandis HOM05D005960 ORTHO05D007537 2.0e-216 755.7 453 82.8
MD17G1056600 Malus domestica HOM05D005960 ORTHO05D007537 8.3e-215 750.4 452 83.0
Actinidia01975 Actinidia chinensis HOM05D005960 ORTHO05D007537 7.0e-214 747.3 460 82.8
CANSAT64G2728 Cannabis sativa HOM05D005960 ORTHO05D007537 9.1e-214 746.9 452 81.9
TWI60G0302 Tripterygium wilfordii HOM05D005960 ORTHO05D007537 5.9e-213 744.2 451 81.8
Ciclev10011697m.g Citrus clementina HOM05D005960 ORTHO05D007537 5.0e-212 741.1 454 81.5
Rhsim10G0047200 Rhododendron simsii HOM05D005960 ORTHO05D007537 1.5e-211 739.6 472 79.9
CSS0005506 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 1.9e-211 739.2 456 82.2
CSS0003743 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 2.5e-211 738.8 456 82.2
Sabra17G0079200 Salix brachista HOM05D005960 ORTHO05D007537 2.5e-211 738.8 471 79.2
vmacro05665 Vaccinium macrocarpon HOM05D005960 ORTHO05D007537 4.2e-211 738.0 455 82.9
MBI16_g15532_MAGBIO Magnolia biondii HOM05D005960 ORTHO05D007537 9.5e-211 736.9 455 82.0
Potri.017G090100 Populus trichocarpa HOM05D005960 ORTHO05D007537 1.2e-210 736.5 455 81.1
Duzib147G1008 Durio zibethinus HOM05D005960 ORTHO05D007537 1.6e-210 736.1 456 80.3
Thecc.04G090800 Theobroma cacao HOM05D005960 ORTHO05D007537 1.6e-210 736.1 458 80.6
Cpa.g.sc14.144 Carica papaya HOM05D005960 ORTHO05D007537 2.8e-210 735.3 455 81.1
Haze_14472 Corylus avellana HOM05D005960 ORTHO05D007537 6.1e-210 734.2 518 73.9
Rhsim10G0046600 Rhododendron simsii HOM05D005960 ORTHO05D007537 1.4e-209 733.0 472 79.4
Hma1.2p1_3044F.1_g332080 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 8.9e-209 730.3 453 81.0
MELO3C022021.2 Cucumis melo HOM05D005960 ORTHO05D007537 7.5e-208 727.2 453 81.2
ClCG11G004630 Citrullus lanatus HOM05D005960 ORTHO05D007537 1.7e-207 726.1 453 81.2
Aqoxy3G00406 Aquilegia oxysepala HOM05D005960 ORTHO05D007537 2.2e-207 725.7 452 80.3
THA.LOC104802965 Tarenaya hassleriana HOM05D005960 ORTHO05D007537 3.7e-207 724.9 450 80.7
CsaV3_5G038400 Cucumis sativus L. HOM05D005960 ORTHO05D007537 6.3e-207 724.2 453 81.0
Gohir.A11G071600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 3.1e-206 721.8 459 79.5
Oeu000854.1 Olea europaea HOM05D005960 ORTHO05D007537 3.1e-206 721.8 470 78.3
COL.COLO4_21375 Corchorus olitorius HOM05D005960 ORTHO05D007537 5.4e-206 721.1 456 79.4
Gorai.007G081300 Gossypium raimondii HOM05D005960 ORTHO05D007537 2.0e-205 719.2 459 79.1
Sed0006667 Sechium edule HOM05D005960 ORTHO05D007537 3.5e-205 718.4 453 81.0
EL10Ac2g03055 Beta vulgaris HOM05D005960 ORTHO05D007537 5.9e-205 717.6 449 80.0
DCAR_005553 Daucus carota HOM05D005960 ORTHO05D007537 6.6e-204 714.1 445 80.9
HanXRQChr14g0448721 Helianthus annuus HOM05D005960 ORTHO05D007537 6.6e-204 714.1 453 79.9
CAN.G734.6 Capsicum annuum HOM05D005960 ORTHO05D007537 4.3e-203 711.4 458 78.8
AUR62042562 Chenopodium quinoa HOM05D005960 ORTHO05D007537 5.6e-203 711.1 457 79.0
PSO013G0364 Papaver somniferum HOM05D005960 ORTHO05D007537 2.1e-202 709.1 454 78.6
Os05g0512200 Oryza sativa ssp. japonica HOM05D005960 ORTHO05D007537 4.7e-202 708.0 405 85.4
PSO421G0059 Papaver somniferum HOM05D005960 ORTHO05D007537 3.0e-201 705.3 454 78.2
Aa31LG5G12560 Aethionema arabicum HOM05D005960 ORTHO05D007537 4.0e-201 704.9 455 79.3
AT3G01060 Arabidopsis thaliana HOM05D005960 ORTHO05D007537 4.0e-201 704.9 455 78.2
ECA238G1943 Erigeron canadensis HOM05D005960 ORTHO05D007537 1.2e-200 703.4 456 78.7
Thhalv10020707m.g Eutrema salsugineum HOM05D005960 ORTHO05D007537 5.7e-200 701.0 456 78.5
CARHR076010 Cardamine hirsuta HOM05D005960 ORTHO05D007537 1.3e-199 699.9 455 77.8
Sp3g01070 Schrenkiella parvula HOM05D005960 ORTHO05D007537 1.7e-199 699.5 451 78.7
Migut.H00653 Erythranthe guttata HOM05D005960 ORTHO05D007537 3.7e-199 698.4 455 78.0
Carub.0003s0111 Capsella rubella HOM05D005960 ORTHO05D007537 1.1e-198 696.8 455 78.5
AL3G11200 Arabidopsis lyrata HOM05D005960 ORTHO05D007537 1.4e-198 696.4 455 77.6
Sopen03g016610 Solanum pennellii HOM05D005960 ORTHO05D007537 6.0e-197 691.0 447 79.4
BolC1t05923H Brassica oleracea HOM05D005960 ORTHO05D007537 3.0e-196 688.7 451 78.5
Solyc03g013240.4 Solanum lycopersicum HOM05D005960 ORTHO05D007537 5.0e-196 688.0 446 78.5
BNapus_Darmor_BZH_scaffold_97p00050 Brassica napus HOM05D005960 ORTHO05D007537 6.6e-196 687.6 451 78.5
BraA01t04634Z Brassica rapa HOM05D005960 ORTHO05D007537 4.3e-195 684.9 454 78.2
BNapus_Darmor_BZH_scaffold_113p00110 Brassica napus HOM05D005960 ORTHO05D007537 9.5e-195 683.7 454 78.0
FAN14G4646 Fragaria x ananassa HOM05D005960 ORTHO05D007537 1.2e-192 676.8 454 76.9
ATR0111G015 Amborella trichopoda HOM05D005960 ORTHO05D007537 2.6e-192 675.6 450 74.0
Lsat_1_v5_gn_2_87860 Lactuca sativa HOM05D005960 ORTHO05D007537 4.9e-191 671.4 457 75.9
Peaxi162Scf00451g00429 Petunia axillaris HOM05D005960 ORTHO05D007537 2.7e-189 665.6 455 76.7
Lj4C116G4 Lonicera japonica HOM05D005960 ORTHO05D007537 1.3e-188 663.3 463 75.2
SalBow1G6551 Salvia bowleyana HOM05D005960 ORTHO05D007537 4.3e-187 658.3 469 74.2
Nn4g23343 Nelumbo nucifera HOM05D005960 ORTHO05D007537 4.0e-185 651.7 362 87.8
FAN02G1813 Fragaria x ananassa HOM05D005960 ORTHO05D007537 2.0e-184 649.4 357 89.4
unitig_736.g22244 Utricularia gibba HOM05D005960 ORTHO05D007537 3.4e-184 648.7 464 71.6
Dinv33810 Davidia involucrata HOM05D005960 ORTHO05D007537 4.9e-183 644.8 452 75.2
Nitab4.5_0001637g0110 Nicotiana tabacum HOM05D005960 ORTHO05D007537 1.6e-181 639.8 460 73.3
BcaC09g47681 Brassica carinata HOM05D005960 ORTHO05D007537 1.2e-178 630.2 451 73.4
Sc10g0003290 Simmondsia chinensis HOM05D005960 ORTHO05D007537 1.1e-177 627.1 370 82.7
SEGI_05647 Sequoiadendron giganteum HOM05D005960 ORTHO05D007537 6.4e-175 617.8 389 75.6
Prupe.3G258900 Prunus persica HOM05D005960 ORTHO05D007537 1.9e-171 606.3 332 89.5
Mapoly0015s0039 Marchantia polymorpha HOM05D005960 ORTHO05D007537 2.1e-165 586.3 397 71.5
Gohir.D11G075600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 5.1e-164 581.6 332 84.9
Pp3c2_13280 Physcomitrium patens HOM05D005960 ORTHO05D007537 6.6e-164 581.3 460 63.9
Cc07_g03890 Coffea canephora HOM05D005960 ORTHO05D007537 7.3e-163 577.8 356 83.4
SMO335G0027 Selaginella moellendorffii HOM05D005960 ORTHO05D007537 2.4e-161 572.8 415 67.7
AUR62018147 Chenopodium quinoa HOM05D005960 ORTHO05D007537 4.2e-158 562.0 357 79.6
Nitab4.5_0005196g0010 Nicotiana tabacum HOM05D005960 ORTHO05D007537 7.9e-157 557.8 456 67.5
AagrBONN_evm.TU.Sc2ySwM_362.2259 Anthoceros agrestis HOM05D005960 ORTHO05D007537 2.8e-154 549.3 394 68.0
Actinidia01967 Actinidia chinensis HOM05D005960 ORTHO05D007537 1.8e-153 546.6 385 74.8
Zm00001eb292620 Zea mays HOM05D005960 ORTHO05D007537 2.4e-153 546.2 298 88.9
CBR_g61504 Chara braunii HOM05D005960 ORTHO05D007537 7.1e-142 508.1 412 61.4
HPP92_018459 Vanilla planifolia HOM05D005960 ORTHO05D007537 2.3e-140 503.1 324 76.5
MSTRG.3021 Avicennia marina HOM05D005960 ORTHO05D007537 1.1e-137 494.2 279 86.4
Dinv11487 Davidia involucrata HOM05D005960 ORTHO05D007537 4.5e-136 488.8 313 80.5
CDE07G2056 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 1.1e-131 474.2 318 73.6
CDE04G1831 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 4.3e-131 472.2 415 62.7
FAN09G3416 Fragaria x ananassa HOM05D005960 ORTHO05D007537 1.5e-123 447.2 413 60.5
Hma1.2p1_1813F.1_g303790 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 2.6e-123 446.4 236 90.3
Hma1.2p1_3044F.1_g332082 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 2.6e-123 446.4 236 90.3
TAR627G0454 Trochodendron aralioides HOM05D005960 ORTHO05D007537 3.2e-118 429.5 332 66.9
Cre13.g562750 Chlamydomonas reinhardtii HOM05D005960 ORTHO05D007537 7.7e-112 408.3 413 50.6
MD09G1061300 Malus domestica HOM05D005960 ORTHO05D007537 7.0e-89 332.0 242 72.7
MCO03G230 Micromonas commoda HOM05D005960 ORTHO05D007537 4.3e-78 296.2 320 49.1
MCO05G128 Micromonas commoda HOM05D005960 ORTHO05D007537 2.5e-62 243.8 353 41.1
TPR.G22619 Trifolium pratense HOM05D005960 ORTHO05D007537 4.4e-59 233.0 147 81.0
PRCOL_00002980 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 2.5e-54 217.2 402 35.3
PRCOL_00004151 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 3.3e-54 216.9 383 37.6
MCO08G069 Micromonas commoda HOM05D005960 ORTHO05D007537 4.6e-48 196.4 349 35.5
PRCOL_00003347 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 1.7e-47 194.5 352 35.2
CDE07G0145 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 1.5e-46 191.4 117 83.8
Potri.004G125301 Populus trichocarpa HOM05D005960 ORTHO05D007537 3.6e-45 186.8 149 64.4
MCO08G121 Micromonas commoda HOM05D005960 ORTHO05D007537 9.0e-44 182.2 370 32.7
Cc07_g03900 Coffea canephora HOM05D005960 ORTHO05D007537 1.2e-40 171.8 102 79.4
EL10Ac2g03064 Beta vulgaris HOM05D005960 ORTHO05D007537 5.6e-38 162.9 96 84.4
AUR62018149 Chenopodium quinoa HOM05D005960 ORTHO05D007537 6.2e-37 159.5 100 77.0
Oeu061493.1 Olea europaea HOM05D005960 ORTHO05D007537 1.2e-19 102.1 51 86.3
MD09G1061200 Malus domestica HOM05D005960 ORTHO05D007537 2.9e-18 97.4 88 60.2
PGSC0003DMG400033541 Solanum tuberosum HOM05D005960 ORTHO05D007537 6.7e-15 86.3 51 88.2
MCO08G023 Micromonas commoda HOM05D005960 ORTHO05D270145 5.0e-10 70.1 150 30.7
Zm00001eb030310 Zea mays HOM05D005960 ORTHO05D051632 7.2e-09 66.2 38 86.8
Zm00001eb250570 Zea mays HOM05D005960 ORTHO05D051632 7.2e-09 66.2 42 81.0


User provided reference genes

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