Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0023599 Lotus japonicus HOM05D007272 ORTHO05D009305 1.2e-294 1015.8 498 100.0
Lj2g0009951 Lotus japonicus HOM05D007272 ORTHO05D009305 1.7e-203 713.0 491 76.2
Glyma.13G064500 Glycine max HOM05D007272 ORTHO05D009305 2.1e-185 652.9 493 69.4
Phvul.004G026700 Phaseolus vulgaris HOM05D007272 ORTHO05D009305 5.3e-181 638.3 495 67.9
Ca_04270_v3 Cicer arietinum L. HOM05D007272 ORTHO05D009305 2.1e-177 626.3 505 65.7
TPR.G4317 Trifolium pratense HOM05D007272 ORTHO05D009305 1.1e-167 594.0 502 63.1
Psat1g075440 Pisum sativum HOM05D007272 ORTHO05D009305 1.6e-164 583.6 488 63.7
arahy.Tifrunner.gnm1.ann1.UFNR33 Arachis hypogaea HOM05D007272 ORTHO05D009305 1.1e-162 577.4 500 60.6
Manes.17G022200 Manihot esculenta HOM05D007272 ORTHO05D009305 5.2e-160 568.5 492 58.9
Potri.017G079100 Populus trichocarpa HOM05D007272 ORTHO05D009305 4.8e-158 562.0 496 59.5
Sabra17G0070200 Salix brachista HOM05D007272 ORTHO05D009305 7.7e-156 554.7 483 58.8
Lalb_Chr21g0318941 Lupinus albus HOM05D007272 ORTHO05D009305 1.3e-155 553.9 484 59.5
GSVIVG01011351001 Vitis vinifera HOM05D007272 ORTHO05D009305 1.9e-154 550.1 481 59.5
Haze_14576 Corylus avellana HOM05D007272 ORTHO05D009305 2.7e-153 546.2 492 58.1
QL02p080768 Quercus lobata HOM05D007272 ORTHO05D009305 2.7e-153 546.2 483 59.8
TWI34G0655 Tripterygium wilfordii HOM05D007272 ORTHO05D009305 5.2e-152 542.0 489 58.7
Duzib187G0958 Durio zibethinus HOM05D007272 ORTHO05D009305 2.0e-151 540.0 502 57.4
Cfa007518 Carpinus fangiana HOM05D007272 ORTHO05D009305 1.3e-150 537.3 493 56.8
Thecc.04G075900 Theobroma cacao HOM05D007272 ORTHO05D009305 3.1e-149 532.7 496 56.9
Hma1.2p1_0449F.1_g155160 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 9.1e-149 531.2 497 57.5
Actinidia23567 Actinidia chinensis HOM05D007272 ORTHO05D009305 1.2e-148 530.8 481 56.5
Gorai.006G025400 Gossypium raimondii HOM05D007272 ORTHO05D009305 2.0e-148 530.0 509 56.4
arahy.Tifrunner.gnm1.ann1.091QIK Arachis hypogaea HOM05D007272 ORTHO05D009305 1.3e-147 527.3 585 51.6
Prupe.3G271100 Prunus persica HOM05D007272 ORTHO05D009305 1.3e-147 527.3 498 57.6
TAR629G0691 Trochodendron aralioides HOM05D007272 ORTHO05D009305 6.5e-147 525.0 500 56.4
Ciclev10011541m.g Citrus clementina HOM05D007272 ORTHO05D009305 8.6e-147 524.6 493 56.4
vmacro05725 Vaccinium macrocarpon HOM05D007272 ORTHO05D009305 1.1e-146 524.2 502 55.4
PGR142G3376 Punica granatum HOM05D007272 ORTHO05D009305 1.9e-146 523.5 483 56.3
Nn3g17142 Nelumbo nucifera HOM05D007272 ORTHO05D009305 2.5e-146 523.1 493 54.8
CiPaw.04G019400 Carya illinoinensis HOM05D007272 ORTHO05D009305 7.2e-146 521.5 499 55.3
Gohir.A09G022200 Gossypium hirsutum HOM05D007272 ORTHO05D009305 1.2e-145 520.8 513 55.6
Cpa.g.sc14.36 Carica papaya HOM05D007272 ORTHO05D009305 1.2e-140 504.2 466 57.7
MD17G1048000 Malus domestica HOM05D007272 ORTHO05D009305 1.6e-140 503.8 511 55.6
Lj7C400T1 Lonicera japonica HOM05D007272 ORTHO05D009305 1.1e-138 497.7 492 54.1
Sc10g0003770 Simmondsia chinensis HOM05D007272 ORTHO05D009305 1.1e-138 497.7 495 52.3
FvH4_6g49170 Fragaria vesca HOM05D007272 ORTHO05D009305 2.1e-137 493.4 512 53.7
QL02p080779 Quercus lobata HOM05D007272 ORTHO05D009305 2.8e-137 493.0 552 52.2
Gohir.D09G021400 Gossypium hirsutum HOM05D007272 ORTHO05D009305 6.1e-137 491.9 468 56.8
FAN14G5197 Fragaria x ananassa HOM05D007272 ORTHO05D009305 8.0e-137 491.5 512 53.5
RcHm_v2.0_Chr2g0169041 Rosa chinensis HOM05D007272 ORTHO05D009305 8.0e-137 491.5 519 53.4
ClCG10G014870 Citrullus lanatus HOM05D007272 ORTHO05D009305 1.0e-136 491.1 477 54.7
DCAR_021668 Daucus carota HOM05D007272 ORTHO05D009305 1.4e-136 490.7 479 53.4
HanXRQChr14g0449311 Helianthus annuus HOM05D007272 ORTHO05D009305 8.9e-136 488.0 498 52.4
FAN02G2692 Fragaria x ananassa HOM05D001960 ORTHO05D004348 1.3e-134 484.2 493 53.5
AUR62031636 Chenopodium quinoa HOM05D007272 ORTHO05D009305 1.7e-134 483.8 489 49.9
RhsimUnG0199700 Rhododendron simsii HOM05D007272 ORTHO05D009305 2.9e-134 483.0 554 49.3
FAN05G2713 Fragaria x ananassa HOM05D007272 ORTHO05D009305 4.9e-134 482.3 494 53.8
Ah.10g031300 Amaranthus hybridus HOM05D007272 ORTHO05D009305 1.4e-133 480.7 483 50.7
Hund13235 Selenicereus undatus HOM05D007272 ORTHO05D009305 4.6e-132 475.7 482 51.0
Lsat_1_v5_gn_2_88701 Lactuca sativa HOM05D007272 ORTHO05D009305 1.7e-131 473.8 489 51.7
VMungo0464G0783 Vigna mungo HOM05D007272 ORTHO05D009305 2.3e-131 473.4 406 65.3
Glyma.19G020400 Glycine max HOM05D007272 ORTHO05D009305 4.3e-130 469.2 343 73.2
THA.LOC104822369 Tarenaya hassleriana HOM05D007272 ORTHO05D009305 1.2e-129 467.6 495 51.9
Cc07_g03090 Coffea canephora HOM05D007272 ORTHO05D009305 1.1e-128 464.5 491 51.3
RhsimUnG0056400 Rhododendron simsii HOM05D007272 ORTHO05D009305 8.9e-128 461.5 604 46.0
EL10Ac2g02942 Beta vulgaris HOM05D007272 ORTHO05D009305 2.7e-124 449.9 500 48.4
Nitab4.5_0009739g0030 Nicotiana tabacum HOM05D007272 ORTHO05D009305 7.8e-124 448.4 509 49.3
SalBow1G7111 Salvia bowleyana HOM05D007272 ORTHO05D009305 7.8e-124 448.4 505 49.9
ECA238G2465 Erigeron canadensis HOM05D007272 ORTHO05D009305 1.0e-123 448.0 475 50.7
MSTRG.3220 Avicennia marina HOM05D007272 ORTHO05D009305 1.1e-122 444.5 484 53.1
Dinv33728 Davidia involucrata HOM05D007272 ORTHO05D009305 3.3e-122 443.0 363 62.3
Migut.H00895 Erythranthe guttata HOM05D007272 ORTHO05D009305 4.3e-122 442.6 506 49.2
FAN09G2990 Fragaria x ananassa HOM05D007272 ORTHO05D009305 3.6e-121 439.5 409 57.2
HPP92_000629 Vanilla planifolia HOM05D007272 ORTHO05D009305 1.8e-120 437.2 499 48.9
SGA_v2.0_scaffold135G34775 Striga asiatica HOM05D007118 ORTHO05D008957 4.4e-119 432.6 503 49.7
Peaxi162Scf00129g00431 Petunia axillaris HOM05D007272 ORTHO05D009305 1.3e-118 431.0 513 48.0
Gorai.012G056400 Gossypium raimondii HOM05D007272 ORTHO05D009305 2.1e-116 423.7 465 49.0
CANSAT64G0717 Cannabis sativa HOM05D007272 ORTHO05D009305 2.7e-116 423.3 481 47.6
Oeu037173.1 Olea europaea HOM05D007272 ORTHO05D009305 3.5e-116 422.9 498 49.0
Gohir.D04G050866 Gossypium hirsutum HOM05D007272 ORTHO05D009305 6.0e-116 422.2 465 49.0
COL.COLO4_25162 Corchorus olitorius HOM05D007118 ORTHO05D008957 7.8e-116 421.8 499 48.9
ATR0706G038 Amborella trichopoda HOM05D007272 ORTHO05D009305 1.1e-114 417.9 492 47.4
Medtr6g011500 Medicago truncatula HOM05D007272 ORTHO05D009305 4.7e-113 412.5 373 62.2
PSO591G0492 Papaver somniferum HOM05D007272 ORTHO05D009305 1.8e-112 410.6 477 47.2
Gohir.A05G363800 Gossypium hirsutum HOM05D007272 ORTHO05D009305 3.4e-111 406.4 466 48.1
Solyc02g087730.3 Solanum lycopersicum HOM05D007272 ORTHO05D009305 7.6e-111 405.2 489 46.8
Sopen02g032460 Solanum pennellii HOM05D007272 ORTHO05D009305 3.8e-110 402.9 489 46.4
Atru.chr8.1898 Acer truncatum HOM05D007272 ORTHO05D009305 2.4e-109 400.2 369 58.5
Aqoxy3G03290 Aquilegia oxysepala HOM05D007272 ORTHO05D009305 4.0e-104 382.9 403 51.6
Zm00001eb121640 Zea mays HOM05D007272 ORTHO05D009305 1.7e-102 377.5 488 44.9
Os01g0185400 Oryza sativa ssp. japonica HOM05D007272 ORTHO05D009305 4.9e-102 375.9 499 44.5
PSO832G2300 Papaver somniferum HOM05D007272 ORTHO05D009305 1.3e-99 367.9 429 47.3
MD17G1048100 Malus domestica HOM05D007272 ORTHO05D009305 6.7e-91 339.0 315 58.1
MD09G1047900 Malus domestica HOM05D007272 ORTHO05D009305 5.6e-90 335.9 524 41.6
Pp3c15_23310 Physcomitrium patens HOM05D007272 ORTHO05D009305 5.8e-87 325.9 501 40.3
Nitab4.5_0000564g0300 Nicotiana tabacum HOM05D007272 ORTHO05D009305 5.1e-83 312.8 569 38.5
PGSC0003DMG400001312 Solanum tuberosum HOM05D007272 ORTHO05D009305 3.7e-73 280.0 278 54.0
Mapoly0135s0023 Marchantia polymorpha HOM05D007272 ORTHO05D009305 4.8e-73 279.6 495 37.2
SMO356G0594 Selaginella moellendorffii HOM05D007272 ORTHO05D009305 1.7e-62 244.6 424 37.3
CSS0013465 Camellia sinensis var. sinensis HOM05D007272 ORTHO05D009305 2.2e-54 217.6 217 53.5
CSS0034889 Camellia sinensis var. sinensis HOM05D007272 ORTHO05D009305 2.4e-48 197.6 227 50.7
CDE04G0606 Ceratophyllum demersum HOM05D007272 ORTHO05D009305 1.0e-38 165.6 201 45.3
Duzib147G0842 Durio zibethinus HOM05D007272 ORTHO05D009305 3.5e-31 140.6 168 48.8
VMungo0464G0246 Vigna mungo HOM05D007272 ORTHO05D009305 5.9e-31 139.8 123 56.9
Zm00001eb204740 Zea mays HOM05D007272 ORTHO05D009305 6.8e-27 126.3 128 51.6
Medtr6g011510 Medicago truncatula HOM05D007272 ORTHO05D009305 2.2e-25 121.3 132 49.2
AagrBONN_evm.TU.Sc2ySwM_344.2727 Anthoceros agrestis HOM05D007272 ORTHO05D009305 7.8e-23 112.8 180 33.3
Hma1.2p1_2982F.1_g331250 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 3.0e-19 100.9 74 67.6
ATR0693G009 Amborella trichopoda HOM05D007272 ORTHO05D009305 2.0e-18 98.2 144 42.4
Medtr8g044020 Medicago truncatula HOM05D007272 ORTHO05D009305 2.0e-18 98.2 179 38.0
CDE04G1434 Ceratophyllum demersum HOM05D007272 ORTHO05D009305 1.2e-15 89.0 134 38.1
Hma1.2p1_0449F.1_g155150 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 2.7e-15 87.8 164 37.2
Hma1.2p1_2982F.1_g331245 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 2.7e-15 87.8 164 37.2
HanXRQChr07g0191831 Helianthus annuus HOM05D007272 ORTHO05D009305 3.9e-14 84.0 72 59.7
SGA_v2.0_scaffold52G19082 Striga asiatica HOM05D007272 ORTHO05D009305 1.1e-13 82.4 150 36.7
MELO3C030970.2 Cucumis melo HOM05D007272 ORTHO05D009305 2.3e-11 74.7 74 55.4
SGA_v2.0_scaffold52G19148 Striga asiatica HOM05D007272 ORTHO05D009305 8.9e-11 72.8 108 39.8
FAN19G2836 Fragaria x ananassa HOM05D007272 ORTHO05D045475 1.1e-08 65.9 40 75.0
Dinv33460 Davidia involucrata HOM05D007272 ORTHO05D010159 1.6e-07 62.0 50 58.0
SGA_v2.0_scaffold52G19157 Striga asiatica HOM05D016586 ORTHO05D009305 1.6e-07 62.0 76 42.1
SMO358G0628 Selaginella moellendorffii HOM05D004758 ORTHO05D006063 1.3e-06 58.9 135 34.1
Zm00001eb326820 Zea mays HOM05D005508 ORTHO05D006882 1.7e-06 58.5 345 25.2
PSO063G1271 Papaver somniferum HOM05D004758 ORTHO05D006063 2.3e-06 58.2 132 29.5
PSO782G4173 Papaver somniferum HOM05D004758 ORTHO05D006063 3.9e-06 57.4 132 29.5
Duzib248G0831 Durio zibethinus HOM05D000453 ORTHO05D000387 8.6e-06 56.2 156 28.2


User provided reference genes

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