Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0023311 Lotus japonicus HOM05D009279 ORTHO05D011257 4.8e-177 624.4 319 100.0
Glyma.16G208000 Glycine max HOM05D009279 ORTHO05D011257 1.3e-84 317.4 325 58.2
Glyma.09G157500 Glycine max HOM05D009279 ORTHO05D011257 3.7e-84 315.8 324 58.6
Lalb_Chr06g0168731 Lupinus albus HOM05D009279 ORTHO05D011257 2.3e-78 296.6 324 56.2
Lalb_Chr03g0033361 Lupinus albus HOM05D009279 ORTHO05D011257 4.8e-76 288.9 324 54.0
Phvul.007G114700 Phaseolus vulgaris HOM05D009279 ORTHO05D011257 4.1e-75 285.8 324 57.7
Lj5g0013459 Lotus japonicus HOM05D009279 ORTHO05D011257 3.4e-74 282.7 327 54.7
Glyma.10G175600 Glycine max HOM05D009279 ORTHO05D011257 1.3e-73 280.8 320 55.9
Glyma.20G214900 Glycine max HOM05D009279 ORTHO05D011257 1.7e-73 280.4 323 55.7
VMungo0464G0081 Vigna mungo HOM05D009279 ORTHO05D011257 2.2e-73 280.0 324 54.0
VMungo0720G2603 Vigna mungo HOM05D009279 ORTHO05D011257 2.5e-72 276.6 308 56.2
Medtr1g077140 Medicago truncatula HOM05D009279 ORTHO05D011257 2.2e-68 263.5 324 53.1
Psat6g111800 Pisum sativum HOM05D009279 ORTHO05D011257 3.5e-66 256.1 321 53.0
Psat6g111760 Pisum sativum HOM05D009279 ORTHO05D011257 1.5e-64 250.8 321 52.3
TPR.G16621 Trifolium pratense HOM05D009279 ORTHO05D011257 2.5e-64 250.0 316 52.5
Phvul.004G132600 Phaseolus vulgaris HOM05D009279 ORTHO05D011257 9.4e-64 248.1 329 52.6
arahy.Tifrunner.gnm1.ann1.JKND9T Arachis hypogaea HOM05D009279 ORTHO05D011257 6.1e-55 218.8 333 45.6
Ca_09909_v3 Cicer arietinum L. HOM05D009279 ORTHO05D011257 3.4e-53 213.0 325 45.8
Cfa020940 Carpinus fangiana HOM05D009279 ORTHO05D011257 1.5e-45 187.6 331 43.5
Haze_19372 Corylus avellana HOM05D009279 ORTHO05D011257 7.0e-43 178.7 332 40.1
TWI79G0814 Tripterygium wilfordii HOM05D009279 ORTHO05D011257 6.6e-41 172.2 340 40.0
EL10Ac4g09710 Beta vulgaris HOM05D009279 ORTHO05D011257 2.2e-36 157.1 338 34.6
Thecc.01G145700 Theobroma cacao HOM05D009279 ORTHO05D011257 2.0e-34 150.6 321 36.4
AUR62000582 Chenopodium quinoa HOM05D009279 ORTHO05D011257 2.1e-31 140.6 335 31.6
Cpa.g.sc138.53 Carica papaya HOM05D009279 ORTHO05D011257 6.8e-30 135.6 315 33.0
Potri.T013100 Populus trichocarpa HOM05D009279 ORTHO05D011257 8.9e-30 135.2 330 33.6
Aqoxy6G00047 Aquilegia oxysepala HOM05D009279 ORTHO05D011257 2.6e-29 133.7 338 32.8
AUR62006938 Chenopodium quinoa HOM05D009279 ORTHO05D011257 3.7e-20 103.2 222 31.5
HPP92_024400 Vanilla planifolia HOM05D009279 ORTHO05D011257 1.4e-14 84.7 332 26.2
Sc16g0009940 Simmondsia chinensis HOM05D009279 ORTHO05D011257 5.8e-13 79.3 164 38.4
Potri.018G145526 Populus trichocarpa HOM05D009279 ORTHO05D011257 7.1e-11 72.4 145 37.2
Zm00001eb167950 Zea mays HOM05D009279 ORTHO05D011257 1.6e-07 61.2 331 22.4
Pp3c20_12050 Physcomitrium patens HOM05D002440 ORTHO05D002576 2.1e-07 60.8 333 24.3
Pp3c23_10870 Physcomitrium patens HOM05D002440 ORTHO05D002576 3.1e-06 57.0 341 23.8
HPP92_005636 Vanilla planifolia HOM05D025377 ORTHO05D011257 8.9e-06 55.5 288 22.9


User provided reference genes

Program Settings