Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0023188 Lotus japonicus HOM05D010130 ORTHO05D010480 3.2e-80 301.6 142 100.0
Glyma.09G180600 Glycine max HOM05D010130 ORTHO05D010480 4.4e-37 158.3 147 59.2
Phvul.004G153800 Phaseolus vulgaris HOM05D010130 ORTHO05D010480 3.7e-36 155.2 133 55.6
VMungo0464G1836 Vigna mungo HOM05D010130 ORTHO05D010480 1.1e-35 153.7 135 57.8
TPR.G5054 Trifolium pratense HOM05D010130 ORTHO05D010480 1.8e-22 109.8 117 46.2
arahy.Tifrunner.gnm1.ann1.53L2ET Arachis hypogaea HOM05D010130 ORTHO05D010480 5.7e-21 104.8 126 48.4
Lalb_Chr07g0187771 Lupinus albus HOM05D010130 ORTHO05D010480 5.7e-21 104.8 135 46.7
CiPaw.15G135200 Carya illinoinensis HOM05D010130 ORTHO05D010480 1.6e-15 86.7 110 47.3
CiPaw.16G089000 Carya illinoinensis HOM05D010130 ORTHO05D010480 2.1e-15 86.3 112 46.4
Thecc.03G041000 Theobroma cacao HOM05D010130 ORTHO05D010480 8.0e-15 84.3 116 39.7
Ciclev10023366m.g Citrus clementina HOM05D010130 ORTHO05D010480 4.4e-13 78.6 64 57.8
Manes.01G015000 Manihot esculenta HOM05D010130 ORTHO05D010480 3.7e-12 75.5 84 48.8
QL10p026531 Quercus lobata HOM05D010130 ORTHO05D010480 6.3e-12 74.7 85 51.8
QL93p0217_0001 Quercus lobata HOM05D010130 ORTHO05D010480 6.3e-12 74.7 85 51.8
Prupe.5G224800 Prunus persica HOM05D010130 ORTHO05D010480 2.4e-11 72.8 70 51.4
TPR.G25986 Trifolium pratense HOM05D010130 ORTHO05D010480 4.1e-11 72.0 68 54.4
Atru.chr9.904 Acer truncatum HOM05D010130 ORTHO05D010480 2.0e-10 69.7 95 40.0
Lalb_Chr14g0370961 Lupinus albus HOM05D010130 ORTHO05D010480 1.7e-09 66.6 80 45.0
FAN05G1532 Fragaria x ananassa HOM05D011814 ORTHO05D010480 5.0e-09 65.1 70 48.6
Aqoxy3G03833 Aquilegia oxysepala HOM05D009302 ORTHO05D010480 8.6e-09 64.3 100 40.0
Gohir.A11G004550 Gossypium hirsutum HOM05D010130 ORTHO05D010480 8.6e-09 64.3 83 44.6
Gorai.007G005000 Gossypium raimondii HOM05D010130 ORTHO05D010480 8.6e-09 64.3 83 44.6
FvH4_6g26821 Fragaria vesca HOM05D010130 ORTHO05D010480 5.6e-08 61.6 66 47.0
Cpa.g.sc3.464 Carica papaya HOM05D009302 ORTHO05D010480 1.2e-07 60.5 64 46.9
Sabra15G0041000 Salix brachista HOM05D009302 ORTHO05D010480 3.6e-07 58.9 91 42.9
Gohir.D11G003850 Gossypium hirsutum HOM05D010130 ORTHO05D010480 4.7e-07 58.5 65 44.6


User provided reference genes

Program Settings