Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0023112 Lotus japonicus HOM05D012459 ORTHO05D010844 0.0e+00 1495.3 833 100.0
Glyma.16G211200 Glycine max HOM05D012459 ORTHO05D010844 5.4e-220 768.5 832 56.1
Ca_25366_v3 Cicer arietinum L. HOM05D012459 ORTHO05D010844 9.2e-220 767.7 856 57.4
TPR.G28364 Trifolium pratense HOM05D012459 ORTHO05D010844 1.7e-218 763.5 851 57.8
Glyma.16G211400 Glycine max HOM05D000005 ORTHO05D010844 3.4e-198 696.0 772 55.3
Medtr6g078430 Medicago truncatula HOM05D012459 ORTHO05D010844 1.2e-190 671.0 810 54.0
Phvul.004G137400 Phaseolus vulgaris HOM05D012459 ORTHO05D010844 1.4e-188 664.1 842 51.4
Psat0s4832g0040 Pisum sativum HOM05D012459 ORTHO05D010844 8.2e-184 648.3 700 58.1
VMungo0464G0894 Vigna mungo HOM05D000005 ORTHO05D012186 6.7e-178 628.6 811 51.4
Lalb_Chr19g0134401 Lupinus albus HOM05D012459 ORTHO05D010844 1.0e-165 588.2 745 52.5
Glyma.09G162200 Glycine max HOM05D012459 ORTHO05D010844 2.8e-160 570.1 762 49.6
arahy.Tifrunner.gnm1.ann1.UJV3YP Arachis hypogaea HOM05D012459 ORTHO05D010844 2.3e-93 347.8 847 37.7
Lalb_Chr17g0336721 Lupinus albus HOM05D012459 ORTHO05D010844 3.2e-79 300.8 458 47.4
Psat7g226800 Pisum sativum HOM05D012459 ORTHO05D010844 1.4e-74 285.4 601 40.3
arahy.Tifrunner.gnm1.ann1.9KKX2T Arachis hypogaea HOM05D012459 ORTHO05D010844 5.6e-68 263.5 666 36.8
QL10p005044 Quercus lobata HOM05D012473 ORTHO05D010844 1.5e-31 142.5 878 29.4
Dinv07458 Davidia involucrata HOM05D010873 ORTHO05D013124 2.0e-25 122.1 833 27.7
FAN19G1264 Fragaria x ananassa HOM05D012473 ORTHO05D010844 1.6e-22 112.5 875 25.9
FvH4_1g25520 Fragaria vesca HOM05D012473 ORTHO05D010844 8.8e-21 106.7 874 26.8
Haze_16528 Corylus avellana HOM05D012473 ORTHO05D010844 2.0e-20 105.5 188 45.7
QL02p071969 Quercus lobata HOM05D012473 ORTHO05D010844 4.4e-20 104.4 861 28.6
CiPaw.03G115200 Carya illinoinensis HOM05D012218 ORTHO05D010844 5.7e-20 104.0 1015 26.8
Cfa001988 Carpinus fangiana HOM05D012473 ORTHO05D010844 1.4e-18 99.4 186 46.2
Actinidia06596 Actinidia chinensis HOM05D010873 ORTHO05D013124 1.8e-18 99.0 991 25.7
Gohir.A05G382500 Gossypium hirsutum HOM05D012218 ORTHO05D010844 5.9e-17 94.0 882 24.5
TAR381G1694 Trochodendron aralioides HOM05D012218 ORTHO05D010844 1.3e-16 92.8 1007 24.2
Cpa.g.sc37.40 Carica papaya HOM05D001512 ORTHO05D001574 2.3e-16 92.0 195 41.0
FAN28G1165 Fragaria x ananassa HOM05D012473 ORTHO05D010844 8.6e-16 90.1 871 24.2
Thecc.01G142200 Theobroma cacao HOM05D012218 ORTHO05D010844 1.1e-15 89.7 888 22.5
Gohir.D04G032700 Gossypium hirsutum HOM05D012218 ORTHO05D010844 1.9e-15 89.0 888 24.2
Gorai.012G037100 Gossypium raimondii HOM05D012218 ORTHO05D010844 2.5e-15 88.6 882 24.4
FAN23G1528 Fragaria x ananassa HOM05D012473 ORTHO05D010844 5.5e-15 87.4 873 25.2
MD15G1138700 Malus domestica HOM05D012473 ORTHO05D010844 1.2e-14 86.3 820 26.7
ClCG01G004750 Citrullus lanatus HOM05D036858 ORTHO05D010844 6.1e-14 84.0 166 38.6
Duzib187G0544 Durio zibethinus HOM05D012218 ORTHO05D010844 3.0e-13 81.6 612 27.0
Thhalv10029311m.g Eutrema salsugineum HOM05D009813 ORTHO05D011936 2.0e-12 79.0 195 41.0
Sc09g0002200 Simmondsia chinensis HOM05D030946 ORTHO05D010844 2.0e-12 79.0 174 40.2
Aa31LG1G18120 Aethionema arabicum HOM05D009813 ORTHO05D011936 4.4e-12 77.8 169 33.1
Sed0024256 Sechium edule HOM05D036858 ORTHO05D010844 6.3e-11 73.9 200 41.5
MELO3C005461.2 Cucumis melo HOM05D036858 ORTHO05D010844 1.1e-10 73.2 162 41.4
CARHR277640 Cardamine hirsuta HOM05D009813 ORTHO05D011936 9.2e-10 70.1 155 41.3
DCAR_022171 Daucus carota HOM05D010873 ORTHO05D013124 1.2e-09 69.7 502 26.5
Sp2g26820 Schrenkiella parvula HOM05D009813 ORTHO05D011936 1.2e-09 69.7 155 36.8
Rhsim10G0129700 Rhododendron simsii HOM05D017996 ORTHO05D017165 2.0e-09 68.9 483 27.1
AL8G40880 Arabidopsis lyrata HOM05D009813 ORTHO05D011936 3.9e-08 64.7 190 37.4
AL8G40940 Arabidopsis lyrata HOM05D009813 ORTHO05D011936 3.9e-08 64.7 190 37.4
AUR62003591 Chenopodium quinoa HOM05D030946 ORTHO05D010844 5.0e-08 64.3 123 38.2
BcaC04g23353 Brassica carinata HOM05D009813 ORTHO05D011936 1.1e-07 63.2 192 33.9
Manes.05G184500 Manihot esculenta HOM05D012218 ORTHO05D010844 1.1e-07 63.2 888 25.3
A09p08400 Brassica napus HOM05D009813 ORTHO05D011936 1.5e-07 62.8 174 35.1
BraA09t36490Z Brassica rapa HOM05D009813 ORTHO05D011936 1.5e-07 62.8 174 35.1
CARHR098770 Cardamine hirsuta HOM05D009813 ORTHO05D011936 1.9e-07 62.4 138 42.0
BcaNung04641 Brassica carinata HOM05D009813 ORTHO05D011936 7.3e-07 60.5 257 38.1
Thhalv10019657m.g Eutrema salsugineum HOM05D009813 ORTHO05D011936 1.2e-06 59.7 182 33.5
TWI31G0860 Tripterygium wilfordii HOM05D012218 ORTHO05D010844 1.2e-06 59.7 881 26.8
Nitab4.5_0000350g0130 Nicotiana tabacum HOM05D010873 ORTHO05D013124 1.6e-06 59.3 186 33.3
AT5G63720 Arabidopsis thaliana HOM05D009813 ORTHO05D011936 2.8e-06 58.5 195 35.4


User provided reference genes

Program Settings