Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0023107 Lotus japonicus HOM05D005771 ORTHO05D007173 1.1e-193 679.9 358 100.0
arahy.Tifrunner.gnm1.ann1.2CCA8K Arachis hypogaea HOM05D005771 ORTHO05D007173 1.5e-118 430.3 352 65.6
arahy.Tifrunner.gnm1.ann1.X1SA4Y Arachis hypogaea HOM05D005771 ORTHO05D007173 1.5e-118 430.3 352 65.6
Phvul.003G227100 Phaseolus vulgaris HOM05D005771 ORTHO05D007173 8.2e-117 424.5 364 66.2
Glyma.17G150800 Glycine max HOM05D005771 ORTHO05D007173 1.7e-114 416.8 340 67.1
Glyma.05G068200 Glycine max HOM05D005771 ORTHO05D007173 2.1e-112 409.8 371 63.6
Ca_22032_v3 Cicer arietinum L. HOM05D005771 ORTHO05D007173 1.2e-110 404.1 340 65.6
Lalb_Chr05g0220751 Lupinus albus HOM05D005771 ORTHO05D007173 3.3e-110 402.5 342 67.5
Lalb_Chr16g0386311 Lupinus albus HOM05D005771 ORTHO05D007173 5.3e-108 395.2 350 66.0
Medtr4g099070 Medicago truncatula HOM05D005771 ORTHO05D007173 3.5e-107 392.5 343 64.1
TPR.G11182 Trifolium pratense HOM05D005771 ORTHO05D007173 8.8e-103 377.9 402 56.5
Lj4g0020972 Lotus japonicus HOM05D005771 ORTHO05D007173 2.0e-102 376.7 370 61.9
Cfa012362 Carpinus fangiana HOM05D005771 ORTHO05D007173 7.7e-99 364.8 345 59.4
CiPaw.11G085900 Carya illinoinensis HOM05D005771 ORTHO05D007173 8.0e-96 354.8 360 56.7
QL12p007731 Quercus lobata HOM05D005771 ORTHO05D007173 5.4e-92 342.0 343 54.5
VMungo0251G2395 Vigna mungo HOM05D005771 ORTHO05D007173 1.6e-91 340.5 296 66.2
Haze_08321 Corylus avellana HOM05D005771 ORTHO05D007173 2.0e-91 340.1 403 51.1
MD06G1043400 Malus domestica HOM05D005771 ORTHO05D007173 5.0e-90 335.5 342 57.3
Prupe.5G050200 Prunus persica HOM05D005771 ORTHO05D007173 5.0e-90 335.5 354 55.9
Dinv25170 Davidia involucrata HOM05D005771 ORTHO05D007173 1.9e-89 333.6 368 52.4
TAR629G1255 Trochodendron aralioides HOM05D005771 ORTHO05D007173 2.1e-88 330.1 345 53.6
RcHm_v2.0_Chr7g0207891 Rosa chinensis HOM05D005771 ORTHO05D007173 8.0e-88 328.2 339 54.9
CANSAT21G2176 Cannabis sativa HOM05D005771 ORTHO05D007173 2.0e-86 323.6 345 53.0
Thecc.10G165100 Theobroma cacao HOM05D005771 ORTHO05D007173 4.4e-86 322.4 347 53.9
ClCG10G001970 Citrullus lanatus HOM05D005771 ORTHO05D007173 7.5e-86 321.6 386 50.0
Manes.15G171600 Manihot esculenta HOM05D005771 ORTHO05D007173 1.7e-85 320.5 344 52.9
MD16G1267400 Malus domestica HOM05D005771 ORTHO05D007173 2.9e-85 319.7 343 53.4
Atru.chr9.1139 Acer truncatum HOM05D005771 ORTHO05D007173 1.4e-84 317.4 369 52.0
Hma1.2p1_0414F.1_g147560 Hydrangea macrophylla HOM05D005771 ORTHO05D007173 7.0e-84 315.1 336 54.5
Gorai.009G296800 Gossypium raimondii HOM05D005771 ORTHO05D007173 9.2e-84 314.7 343 53.1
Gohir.D05G283033 Gossypium hirsutum HOM05D005771 ORTHO05D007173 2.0e-83 313.5 343 52.8
Duzib106G1532 Durio zibethinus HOM05D005771 ORTHO05D007173 4.6e-83 312.4 350 52.0
CiPaw.12G058800 Carya illinoinensis HOM05D005771 ORTHO05D007173 1.3e-82 310.8 363 52.1
FvH4_5g20870 Fragaria vesca HOM05D005771 ORTHO05D007173 1.3e-82 310.8 376 50.0
Gohir.A05G281200 Gossypium hirsutum HOM05D005771 ORTHO05D007173 1.7e-82 310.5 345 52.2
Potri.001G148500 Populus trichocarpa HOM05D005771 ORTHO05D007173 1.1e-81 307.8 371 50.4
Sed0018056 Sechium edule HOM05D005771 ORTHO05D007173 2.5e-81 306.6 345 50.1
FAN04G1778 Fragaria x ananassa HOM05D005771 ORTHO05D007173 3.3e-81 306.2 356 52.0
Nn6g33714 Nelumbo nucifera HOM05D005771 ORTHO05D007173 7.3e-81 305.1 349 49.9
Potri.003G085901 Populus trichocarpa HOM05D005771 ORTHO05D007173 7.3e-81 305.1 348 51.4
Ciclev10020716m.g Citrus clementina HOM05D005771 ORTHO05D007173 1.2e-80 304.3 367 51.2
FAN18G3681 Fragaria x ananassa HOM05D005771 ORTHO05D007173 2.8e-80 303.1 386 48.7
PGR031G0896 Punica granatum HOM05D005771 ORTHO05D007173 3.6e-80 302.8 356 49.7
FAN08G3334 Fragaria x ananassa HOM05D005771 ORTHO05D007173 1.8e-79 300.4 350 51.7
Actinidia31481 Actinidia chinensis HOM05D005771 ORTHO05D007173 4.0e-79 299.3 337 50.7
TWI81G0410 Tripterygium wilfordii HOM05D005771 ORTHO05D007173 8.9e-79 298.1 350 52.6
CsaV3_3G002100 Cucumis sativus L. HOM05D005771 ORTHO05D007173 1.5e-78 297.4 388 47.9
Gorai.011G213100 Gossypium raimondii HOM05D005771 ORTHO05D007173 6.4e-77 292.0 342 48.5
Oeu006260.1 Olea europaea HOM05D005771 ORTHO05D007173 1.1e-76 291.2 363 49.0
Eucgr.D02148 Eucalyptus grandis HOM05D005771 ORTHO05D007173 2.4e-76 290.0 349 49.6
Gohir.A10G183200 Gossypium hirsutum HOM05D005771 ORTHO05D007173 4.1e-76 289.3 342 48.5
Psat4g077240 Pisum sativum HOM05D005771 ORTHO05D007173 7.0e-76 288.5 261 62.1
Gohir.D10G190000 Gossypium hirsutum HOM05D005771 ORTHO05D007173 2.1e-75 287.0 343 47.8
MELO3C013882.2 Cucumis melo HOM05D005771 ORTHO05D007173 6.0e-75 285.4 421 43.9
Actinidia10872 Actinidia chinensis HOM05D005771 ORTHO05D007173 1.3e-74 284.3 344 49.1
TWI60G1113 Tripterygium wilfordii HOM05D005771 ORTHO05D007173 3.9e-74 282.7 344 50.3
COL.COLO4_05118 Corchorus olitorius HOM05D005771 ORTHO05D007173 8.6e-74 281.6 343 48.7
Cc08_g01580 Coffea canephora HOM05D005771 ORTHO05D007173 9.5e-73 278.1 376 47.3
Sopen08g026040 Solanum pennellii HOM05D005771 ORTHO05D007173 3.6e-72 276.2 341 47.2
CSS0003087 Camellia sinensis var. sinensis HOM05D005771 ORTHO05D007173 4.7e-72 275.8 345 49.6
Solyc08g077450.4 Solanum lycopersicum HOM05D005771 ORTHO05D007173 1.4e-71 274.2 341 47.2
Hund11296 Selenicereus undatus HOM05D005771 ORTHO05D007173 4.0e-71 272.7 345 46.7
Nitab4.5_0001708g0070 Nicotiana tabacum HOM05D005771 ORTHO05D007173 2.6e-70 270.0 343 48.7
Sc01g0007800 Simmondsia chinensis HOM05D005771 ORTHO05D007173 2.2e-69 266.9 346 47.7
Aqoxy3G02583 Aquilegia oxysepala HOM05D005771 ORTHO05D007173 6.4e-69 265.4 356 46.3
Nitab4.5_0001444g0090 Nicotiana tabacum HOM05D005771 ORTHO05D007173 5.4e-68 262.3 359 47.4
Migut.E00856 Erythranthe guttata HOM05D005771 ORTHO05D007173 1.3e-66 257.7 350 45.4
Migut.E00807 Erythranthe guttata HOM05D005771 ORTHO05D007173 3.9e-66 256.1 350 45.4
MSTRG.1962 Avicennia marina HOM05D005771 ORTHO05D007173 5.6e-65 252.3 341 46.3
SGA_v2.0_scaffold20G09242 Striga asiatica HOM05D005771 ORTHO05D007173 5.6e-65 252.3 354 46.6
CARHR032110 Cardamine hirsuta HOM05D005771 ORTHO05D007173 2.8e-64 250.0 280 51.1
Sabra03G0055800 Salix brachista HOM05D005771 ORTHO05D007173 2.8e-64 250.0 389 44.2
CDE02G0742 Ceratophyllum demersum HOM05D005771 ORTHO05D007173 6.2e-64 248.8 358 44.1
DCAR_000726 Daucus carota HOM05D005771 ORTHO05D007173 6.2e-64 248.8 370 42.7
THA.LOC104812740 Tarenaya hassleriana HOM05D005771 ORTHO05D007173 8.1e-64 248.4 337 45.7
AT1G32730 Arabidopsis thaliana HOM05D005771 ORTHO05D007173 4.0e-63 246.1 336 44.6
Thhalv10008194m.g Eutrema salsugineum HOM05D005771 ORTHO05D007173 6.8e-63 245.4 275 51.6
AL1G47010 Arabidopsis lyrata HOM05D005771 ORTHO05D007173 1.5e-62 244.2 350 43.7
Carub.0001s3106 Capsella rubella HOM05D005771 ORTHO05D007173 4.9e-61 239.2 272 50.4
Cpa.g.sc2.371 Carica papaya HOM05D005771 ORTHO05D007173 6.4e-61 238.8 300 49.7
Aa31LG2G13250 Aethionema arabicum HOM05D005771 ORTHO05D007173 1.9e-60 237.3 337 43.9
THA.LOC104807943 Tarenaya hassleriana HOM05D005771 ORTHO05D007173 2.7e-59 233.4 355 45.1
C05p32200 Brassica napus HOM05D005771 ORTHO05D007173 7.8e-59 231.9 355 44.8
BolC5t31952H Brassica oleracea HOM05D005771 ORTHO05D007173 7.8e-59 231.9 355 44.8
HanXRQChr12g0368601 Helianthus annuus HOM05D005771 ORTHO05D007173 7.8e-59 231.9 364 43.1
Rhsim07G0120600 Rhododendron simsii HOM05D005771 ORTHO05D007173 8.7e-58 228.4 432 40.5
DCAR_000728 Daucus carota HOM05D005771 ORTHO05D007173 7.3e-57 225.3 306 45.1
GSVIVG01013265001 Vitis vinifera HOM05D005771 ORTHO05D007173 2.1e-56 223.8 159 71.7
Lsat_1_v5_gn_6_67960 Lactuca sativa HOM05D005771 ORTHO05D007173 2.8e-56 223.4 281 47.3
EL10Ac5g12212 Beta vulgaris HOM05D005771 ORTHO05D007173 1.1e-55 221.5 349 43.3
CDE11G1022 Ceratophyllum demersum HOM05D005771 ORTHO05D007173 1.1e-55 221.5 344 41.0
Peaxi162Scf00084g00314 Petunia axillaris HOM05D005771 ORTHO05D007173 9.0e-55 218.4 340 41.8
vmacro14112 Vaccinium macrocarpon HOM05D005771 ORTHO05D007173 9.0e-55 218.4 262 51.9
PSO063G1478 Papaver somniferum HOM05D005771 ORTHO05D007173 5.8e-54 215.7 361 40.2
ECA233G5206 Erigeron canadensis HOM05D005771 ORTHO05D007173 1.1e-52 211.5 334 41.6
Sabra01G0116900 Salix brachista HOM05D005771 ORTHO05D007173 1.1e-52 211.5 307 45.0
Sp1g28240 Schrenkiella parvula HOM05D005771 ORTHO05D007173 3.2e-52 209.9 344 40.7
PSO782G3090 Papaver somniferum HOM05D005771 ORTHO05D007173 4.2e-52 209.5 360 39.4
BcaC05g27301 Brassica carinata HOM05D005771 ORTHO05D007173 1.0e-50 204.9 361 41.3
HPP92_007338 Vanilla planifolia HOM05D005771 ORTHO05D007173 1.8e-47 194.1 336 39.6
BcaC05g27831 Brassica carinata HOM05D005771 ORTHO05D007173 9.0e-47 191.8 300 41.0
C05p38290 Brassica napus HOM05D005771 ORTHO05D007173 9.0e-47 191.8 300 41.0
BolC5t32561H Brassica oleracea HOM05D005771 ORTHO05D007173 9.0e-47 191.8 300 41.0
unitig_21.g20376 Utricularia gibba HOM05D005771 ORTHO05D007173 1.2e-46 191.4 375 42.1
ATR0829G207 Amborella trichopoda HOM05D005771 ORTHO05D007173 2.0e-46 190.7 348 36.8
Oeu039354.1 Olea europaea HOM05D005771 ORTHO05D007173 2.0e-46 190.7 260 47.3
A05p24640 Brassica napus HOM05D005771 ORTHO05D007173 3.8e-45 186.4 283 42.4
BraA05t21350Z Brassica rapa HOM05D005771 ORTHO05D007173 3.8e-45 186.4 283 42.4
Os08g0129500 Oryza sativa ssp. japonica HOM05D005771 ORTHO05D007173 8.4e-45 185.3 356 39.0
AUR62007206 Chenopodium quinoa HOM05D005771 ORTHO05D007173 7.1e-44 182.2 299 42.5
AUR62018795 Chenopodium quinoa HOM05D005771 ORTHO05D007173 1.2e-43 181.4 299 42.5
FAN13G3323 Fragaria x ananassa HOM05D005771 ORTHO05D007173 2.1e-43 180.6 378 39.2
Zm00001eb261700 Zea mays HOM05D005771 ORTHO05D007173 4.6e-43 179.5 349 36.4
Sabra01G0118400 Salix brachista HOM05D005771 ORTHO05D007173 3.7e-40 169.9 302 40.4
Ah.07g199650 Amaranthus hybridus HOM05D005771 ORTHO05D007173 5.3e-39 166.0 385 33.2
TPR.G12459 Trifolium pratense HOM05D005771 ORTHO05D007173 8.7e-34 148.7 151 58.9
SEGI_22059 Sequoiadendron giganteum HOM05D005771 ORTHO05D000001 8.2e-24 115.5 344 31.1
Psat4g077280 Pisum sativum HOM05D005771 ORTHO05D007173 5.3e-23 112.8 94 60.6
arahy.Tifrunner.gnm1.ann1.ARXY04 Arachis hypogaea HOM05D005771 ORTHO05D007173 1.5e-14 84.7 64 67.2
Pp3c2_10410 Physcomitrium patens HOM05D005771 ORTHO05D007173 3.2e-12 77.0 367 24.5
SEGI_34267 Sequoiadendron giganteum HOM05D005771 ORTHO05D007173 5.5e-12 76.3 42 73.8
AagrBONN_evm.TU.Sc2ySwM_117.836 Anthoceros agrestis HOM05D005771 ORTHO05D007173 2.1e-11 74.3 363 24.2
Zm00001eb173270 Zea mays HOM05D005771 ORTHO05D007173 3.6e-11 73.6 204 28.9
Mapoly0082s0082 Marchantia polymorpha HOM05D005771 ORTHO05D007173 1.0e-10 72.0 403 24.6
TAR636G0006 Trochodendron aralioides HOM05D005771 ORTHO05D007173 7.4e-09 65.9 55 60.0


User provided reference genes

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