Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0023084 Lotus japonicus HOM05D006644 ORTHO05D008285 1.2e-169 599.7 301 100.0
Glyma.13G075600 Glycine max HOM05D006644 ORTHO05D008285 8.4e-155 550.4 304 90.1
VMungo0720G3176 Vigna mungo HOM05D006644 ORTHO05D008285 4.1e-154 548.1 304 89.1
Phvul.011G156400 Phaseolus vulgaris HOM05D006644 ORTHO05D008285 7.8e-153 543.9 304 88.8
Ca_06699_v3 Cicer arietinum L. HOM05D006644 ORTHO05D008285 2.5e-151 538.9 304 88.5
Psat2g178760 Pisum sativum HOM05D006644 ORTHO05D008285 1.4e-149 533.1 304 87.5
Medtr5g012060 Medicago truncatula HOM05D006644 ORTHO05D008285 3.1e-149 531.9 304 87.5
TPR.G25884 Trifolium pratense HOM05D006644 ORTHO05D008285 9.9e-148 526.9 304 86.5
Lalb_Chr05g0214591 Lupinus albus HOM05D006644 ORTHO05D008285 9.3e-146 520.4 304 85.9
CiPaw.12G106200 Carya illinoinensis HOM05D006644 ORTHO05D008285 4.5e-140 501.5 304 83.6
QL07p036208 Quercus lobata HOM05D006644 ORTHO05D008285 1.7e-139 499.6 303 82.2
arahy.Tifrunner.gnm1.ann1.FSA67V Arachis hypogaea HOM05D006644 ORTHO05D008285 2.2e-139 499.2 297 83.2
arahy.Tifrunner.gnm1.ann1.TVS5XD Arachis hypogaea HOM05D006644 ORTHO05D008285 2.2e-139 499.2 297 83.2
Haze_08586 Corylus avellana HOM05D006644 ORTHO05D008285 2.9e-139 498.8 304 82.9
Atru.chr12.1357 Acer truncatum HOM05D006644 ORTHO05D008285 3.8e-139 498.4 302 81.1
Manes.02G035200 Manihot esculenta HOM05D006644 ORTHO05D008285 3.8e-139 498.4 302 81.5
TWI81G0884 Tripterygium wilfordii HOM05D006644 ORTHO05D008285 4.9e-139 498.0 302 80.8
Cfa012781 Carpinus fangiana HOM05D006644 ORTHO05D008285 1.1e-138 496.9 304 82.2
Prupe.5G076400 Prunus persica HOM05D006644 ORTHO05D008285 4.6e-137 491.5 304 79.9
Duzib068G0588 Durio zibethinus HOM05D006644 ORTHO05D008285 3.0e-136 488.8 302 81.5
Cpa.g.sc29.104 Carica papaya HOM05D006644 ORTHO05D008285 6.7e-136 487.6 302 80.5
Gohir.A03G014500 Gossypium hirsutum HOM05D006644 ORTHO05D008285 1.5e-135 486.5 302 80.5
Potri.001G119700 Populus trichocarpa HOM05D006644 ORTHO05D008285 3.3e-135 485.3 302 80.1
Sabra01G0092400 Salix brachista HOM05D006644 ORTHO05D008285 9.6e-135 483.8 302 80.1
Thecc.03G258000 Theobroma cacao HOM05D006644 ORTHO05D008285 1.3e-134 483.4 302 80.1
FAN08G3361 Fragaria x ananassa HOM05D006644 ORTHO05D008285 1.6e-134 483.0 304 79.9
ClCG10G003030 Citrullus lanatus HOM05D006644 ORTHO05D008285 2.1e-134 482.6 304 79.3
FvH4_5g00371 Fragaria vesca HOM05D006644 ORTHO05D008285 2.8e-134 482.3 304 79.9
MD04G1082000 Malus domestica HOM05D006644 ORTHO05D008285 2.8e-134 482.3 304 78.6
CsaV3_3G003070 Cucumis sativus L. HOM05D006644 ORTHO05D008285 4.8e-134 481.5 304 79.6
FAN04G2033 Fragaria x ananassa HOM05D006644 ORTHO05D008285 6.2e-134 481.1 304 79.6
Gorai.003G168800 Gossypium raimondii HOM05D006644 ORTHO05D008285 1.1e-133 480.3 297 80.8
MELO3C013973.2 Cucumis melo HOM05D006644 ORTHO05D008285 1.4e-133 479.9 304 78.9
Gohir.D03G160300 Gossypium hirsutum HOM05D006644 ORTHO05D008285 1.4e-133 479.9 297 80.1
Ciclev10024149m.g Citrus clementina HOM05D006644 ORTHO05D008285 2.4e-133 479.2 302 78.1
RcHm_v2.0_Chr7g0202141 Rosa chinensis HOM05D006644 ORTHO05D008285 3.1e-133 478.8 304 79.6
Sed0006360 Sechium edule HOM05D006644 ORTHO05D008285 5.3e-133 478.0 297 79.1
MSTRG.22191 Avicennia marina HOM05D006644 ORTHO05D008285 3.4e-132 475.3 304 76.3
TAR629G2969 Trochodendron aralioides HOM05D006644 ORTHO05D008285 3.4e-132 475.3 304 77.6
Hma1.2p1_0123F.1_g057970 Hydrangea macrophylla HOM05D006644 ORTHO05D008285 4.5e-132 474.9 296 78.0
Aqoxy2G01551 Aquilegia oxysepala HOM05D006644 ORTHO05D008285 7.6e-132 474.2 304 76.6
Eucgr.E00462 Eucalyptus grandis HOM05D006644 ORTHO05D008285 9.9e-132 473.8 304 76.6
DCAR_021556 Daucus carota HOM05D006644 ORTHO05D008285 1.3e-131 473.4 304 77.3
CSS0029694 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.7e-131 473.0 304 78.3
CSS0031485 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 3.8e-131 471.9 302 78.5
Nitab4.5_0004059g0010 Nicotiana tabacum HOM05D006644 ORTHO05D008285 8.4e-131 470.7 304 76.0
CANSAT21G2263 Cannabis sativa HOM05D006644 ORTHO05D008285 2.4e-130 469.2 305 75.7
Hund11575 Selenicereus undatus HOM05D006644 ORTHO05D008285 9.3e-130 467.2 304 76.0
Sopen08g003400 Solanum pennellii HOM05D006644 ORTHO05D008285 4.6e-129 464.9 304 75.7
PGSC0003DMG400012507 Solanum tuberosum HOM05D006644 ORTHO05D008285 4.6e-129 464.9 304 75.7
Oeu046413.1 Olea europaea HOM05D006644 ORTHO05D008285 6.0e-129 464.5 304 75.3
Oeu046415.1 Olea europaea HOM05D006644 ORTHO05D008285 6.0e-129 464.5 304 75.3
Cc08_g13030 Coffea canephora HOM05D006644 ORTHO05D008285 7.9e-129 464.2 304 74.3
Lj3P740T25 Lonicera japonica HOM05D006644 ORTHO05D008285 7.9e-129 464.2 304 75.7
Nitab4.5_0001707g0070 Nicotiana tabacum HOM05D006644 ORTHO05D008285 1.0e-128 463.8 304 75.0
COL.COLO4_37229 Corchorus olitorius HOM05D000927 ORTHO05D000850 1.5e-127 459.9 282 81.9
Solyc08g007440.2 Solanum lycopersicum HOM05D006644 ORTHO05D008285 1.9e-127 459.5 304 75.0
CAN.G1394.30 Capsicum annuum HOM05D006644 ORTHO05D008285 3.3e-127 458.8 304 74.3
ECA232G2550 Erigeron canadensis HOM05D006644 ORTHO05D008285 6.2e-126 454.5 304 75.0
Migut.E00967 Erythranthe guttata HOM05D006644 ORTHO05D008285 1.4e-125 453.4 297 75.8
Nn4g25799 Nelumbo nucifera HOM05D006644 ORTHO05D008285 4.0e-125 451.8 292 76.4
HanXRQChr16g0502401 Helianthus annuus HOM05D006644 ORTHO05D008285 9.0e-125 450.7 304 74.0
BcaC04g22441 Brassica carinata HOM05D006644 ORTHO05D008285 2.6e-124 449.1 301 73.1
BolC9t54841H Brassica oleracea HOM05D006644 ORTHO05D008285 2.6e-124 449.1 301 73.1
C09p19300 Brassica napus HOM05D006644 ORTHO05D008285 3.4e-124 448.7 301 73.1
Sc01g0009310 Simmondsia chinensis HOM05D006644 ORTHO05D008285 3.4e-124 448.7 304 73.0
BcaB07g31354 Brassica carinata HOM05D006644 ORTHO05D008285 5.8e-124 448.0 301 72.8
Migut.E01682 Erythranthe guttata HOM05D006644 ORTHO05D008285 1.7e-123 446.4 297 75.1
Lsat_1_v5_gn_4_110420 Lactuca sativa HOM05D006644 ORTHO05D008285 1.7e-123 446.4 300 74.0
A09p16050 Brassica napus HOM05D006644 ORTHO05D008285 2.2e-123 446.0 301 72.4
BraA09t37241Z Brassica rapa HOM05D006644 ORTHO05D008285 2.9e-123 445.7 301 72.1
unitig_0.g533 Utricularia gibba HOM05D006644 ORTHO05D008285 2.9e-123 445.7 297 73.7
Thhalv10023606m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 4.9e-123 444.9 305 73.1
Aa31LG2G270 Aethionema arabicum HOM05D006644 ORTHO05D008285 8.4e-123 444.1 305 72.1
CARHR049110 Cardamine hirsuta HOM05D006644 ORTHO05D008285 1.1e-122 443.7 305 72.8
Sp2g01910 Schrenkiella parvula HOM05D006644 ORTHO05D008285 7.1e-122 441.0 305 71.8
THA.LOC104818444 Tarenaya hassleriana HOM05D006644 ORTHO05D008285 7.1e-122 441.0 304 72.0
AL2G13060 Arabidopsis lyrata HOM05D006644 ORTHO05D008285 2.1e-121 439.5 304 73.4
AT1G62730 Arabidopsis thaliana HOM05D006644 ORTHO05D008285 3.0e-120 435.6 305 72.5
Carub.0002s0225 Capsella rubella HOM05D006644 ORTHO05D008285 3.0e-120 435.6 302 72.8
MBI05_g39054_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 3.9e-120 435.3 302 71.9
Actinidia05183 Actinidia chinensis HOM05D006644 ORTHO05D008285 1.5e-119 433.3 283 77.4
SGA_v2.0_scaffold13G06437 Striga asiatica HOM05D006644 ORTHO05D008285 6.5e-115 417.9 294 71.4
CDE05G2087 Ceratophyllum demersum HOM05D006644 ORTHO05D008285 2.1e-113 412.9 304 67.1
Actinidia27444 Actinidia chinensis HOM05D006644 ORTHO05D008285 3.0e-112 409.1 262 78.6
Os06g0104100 Oryza sativa ssp. japonica HOM05D006644 ORTHO05D008285 7.4e-111 404.4 298 67.4
HPP92_012043 Vanilla planifolia HOM05D006644 ORTHO05D008285 3.7e-110 402.1 295 67.1
Zm00001eb268550 Zea mays HOM05D006644 ORTHO05D008285 6.3e-110 401.4 306 66.0
ATR0789G127 Amborella trichopoda HOM05D006644 ORTHO05D008285 5.0e-107 391.7 304 65.5
Dinv39097 Davidia involucrata HOM05D006644 ORTHO05D008285 7.2e-106 387.9 247 79.4
GSVIVG01000849001 Vitis vinifera HOM05D006644 ORTHO05D008285 1.2e-105 387.1 264 73.9
SalBow7G1671 Salvia bowleyana HOM05D006644 ORTHO05D008285 1.7e-102 376.7 282 66.7
AUR62010133 Chenopodium quinoa HOM05D006644 ORTHO05D008285 1.0e-96 357.5 242 71.1
Lalb_Chr16g0379761 Lupinus albus HOM05D006644 ORTHO05D008285 6.7e-96 354.8 220 81.4
SEGI_03161 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 3.5e-92 342.4 304 57.2
Ah.12g056410 Amaranthus hybridus HOM05D000927 ORTHO05D000850 8.0e-89 331.3 230 71.3
Zm00001eb268530 Zea mays HOM05D006644 ORTHO05D008285 5.2e-88 328.6 270 62.2
Peaxi162Scf00102g01130 Petunia axillaris HOM05D006644 ORTHO05D008285 8.2e-86 321.2 295 60.0
Mapoly0004s0255 Marchantia polymorpha HOM05D006644 ORTHO05D008285 5.3e-85 318.5 301 54.5
SEGI_02663 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 9.1e-85 317.8 291 56.4
Zm00001eb201480 Zea mays HOM05D006644 ORTHO05D008285 1.2e-84 317.4 261 62.8
Pp3c14_3830 Physcomitrium patens HOM05D006644 ORTHO05D008285 1.1e-82 310.8 294 54.1
CSS0049876 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.1e-81 306.6 196 77.0
Thhalv10029515m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 2.0e-76 290.0 303 54.1
SMO358G0371 Selaginella moellendorffii HOM05D006644 ORTHO05D008285 1.1e-74 284.3 296 52.0
Zm00001eb270010 Zea mays HOM05D006644 ORTHO05D008285 1.3e-70 270.8 202 66.3
CBR_g24133 Chara braunii HOM05D006644 ORTHO05D008285 3.6e-65 252.7 309 43.7
ATR0789G122 Amborella trichopoda HOM05D006644 ORTHO05D008285 9.8e-63 244.6 214 60.7
CSS0012505 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.6e-52 210.7 143 73.4
CSS0030048 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.3e-51 207.6 144 72.9
CSS0030367 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.9e-50 203.8 144 71.5
QL12p014121 Quercus lobata HOM05D006644 ORTHO05D008285 1.9e-50 203.8 303 44.6
MCO14G155 Micromonas commoda HOM05D006644 ORTHO05D008285 1.2e-47 194.5 312 39.4
CSS0018627 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.2e-44 184.5 144 68.1
AagrBONN_evm.TU.Sc2ySwM_362.950 Anthoceros agrestis HOM05D006644 ORTHO05D008285 1.9e-42 177.2 157 52.2
Thhalv10022385m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 4.7e-41 172.6 135 65.9
Cre03.g194300 Chlamydomonas reinhardtii HOM05D006644 ORTHO05D008285 1.2e-36 157.9 359 32.9
CSS0020508 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 6.0e-36 155.6 91 80.2
PRCOL_00006235 Prasinoderma coloniale HOM05D006644 ORTHO05D008285 7.3e-34 148.7 294 33.0
Cfa023787 Carpinus fangiana HOM05D006644 ORTHO05D008285 2.9e-30 136.7 355 31.0
BcaC06g31907 Brassica carinata HOM05D006644 ORTHO05D008285 2.1e-28 130.6 148 52.7
MBI05_g43359_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 3.9e-27 126.3 92 68.5
MBI05_g43358_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 8.4e-14 82.0 43 86.0


User provided reference genes

Program Settings