Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0022739 Lotus japonicus HOM05D007681 ORTHO05D009734 2.0e-81 305.8 169 100.0
Lj5g0022624 Lotus japonicus HOM05D007681 ORTHO05D009734 2.1e-78 295.8 170 94.1
Glyma.07G166400 Glycine max HOM05D007681 ORTHO05D009734 3.4e-44 182.2 174 58.0
Ca_12590_v3 Cicer arietinum L. HOM05D007681 ORTHO05D009734 2.0e-41 172.9 179 54.2
Psat6g044480 Pisum sativum HOM05D007681 ORTHO05D009734 1.5e-39 166.8 188 53.7
Medtr1g031740 Medicago truncatula HOM05D007681 ORTHO05D009734 4.7e-38 161.8 185 51.9
TPR.G36897 Trifolium pratense HOM05D007681 ORTHO05D009734 2.3e-37 159.5 172 52.3
Phvul.003G022100 Phaseolus vulgaris HOM05D007681 ORTHO05D009734 2.8e-35 152.5 172 48.3
Lalb_Chr10g0095991 Lupinus albus HOM05D007681 ORTHO05D009734 7.0e-34 147.9 179 48.0
arahy.Tifrunner.gnm1.ann1.2VU2GF Arachis hypogaea HOM05D007681 ORTHO05D009734 1.7e-27 126.7 86 68.6
Cfa014982 Carpinus fangiana HOM05D007681 ORTHO05D009734 4.9e-27 125.2 175 41.7
CsaV3_5G014700 Cucumis sativus L. HOM05D007681 ORTHO05D009734 1.4e-26 123.6 122 50.8
TWI77G0184 Tripterygium wilfordii HOM05D007681 ORTHO05D009734 7.0e-26 121.3 117 48.7
Hma1.2p1_0330F.1_g127440 Hydrangea macrophylla HOM05D007681 ORTHO05D009734 9.2e-26 120.9 112 52.7
Actinidia36647 Actinidia chinensis HOM05D007681 ORTHO05D009734 1.6e-25 120.2 128 41.4
Gohir.1Z015700 Gossypium hirsutum HOM05D007681 ORTHO05D009734 1.6e-25 120.2 111 50.5
Gohir.A01G150154 Gossypium hirsutum HOM05D007681 ORTHO05D009734 1.6e-25 120.2 111 50.5
arahy.Tifrunner.gnm1.ann1.W0FD01 Arachis hypogaea HOM05D007681 ORTHO05D009734 2.0e-25 119.8 112 54.5
Gorai.002G176600 Gossypium raimondii HOM05D007681 ORTHO05D009734 2.0e-25 119.8 111 49.5
Ciclev10016943m.g Citrus clementina HOM05D007681 ORTHO05D009734 3.5e-25 119.0 146 44.5
CiPaw.06G048600 Carya illinoinensis HOM05D007681 ORTHO05D009734 6.0e-25 118.2 175 41.7
Gohir.D01G143200 Gossypium hirsutum HOM05D007681 ORTHO05D009734 1.7e-24 116.7 111 48.6
Sed0010427 Sechium edule HOM05D007681 ORTHO05D009734 3.0e-24 115.9 130 46.9
Cpa.g.sc2.238 Carica papaya HOM05D007681 ORTHO05D009734 3.9e-24 115.5 113 49.6
Thecc.02G287600 Theobroma cacao HOM05D007681 ORTHO05D009734 5.0e-24 115.2 117 47.9
Atru.chr11.647 Acer truncatum HOM05D007681 ORTHO05D009734 8.6e-24 114.4 126 46.0
Dinv28046 Davidia involucrata HOM05D007681 ORTHO05D009734 8.6e-24 114.4 112 49.1
ClCG07G005970 Citrullus lanatus HOM05D007681 ORTHO05D009734 1.5e-23 113.6 175 40.6
Prupe.1G330200 Prunus persica HOM05D007681 ORTHO05D009734 2.5e-23 112.8 141 46.8
Manes.15G131200 Manihot esculenta HOM05D007681 ORTHO05D009734 4.3e-23 112.1 130 45.4
BcaB07g30389 Brassica carinata HOM05D007681 ORTHO05D009734 9.5e-23 110.9 119 48.7
BcaC03g17055 Brassica carinata HOM05D007681 ORTHO05D009734 2.1e-22 109.8 119 48.7
BolC2t11054H Brassica oleracea HOM05D007681 ORTHO05D009734 2.1e-22 109.8 119 48.7
Nn3g18293 Nelumbo nucifera HOM05D007681 ORTHO05D009734 3.6e-22 109.0 112 50.9
C02p49750 Brassica napus HOM05D007681 ORTHO05D009734 4.7e-22 108.6 119 47.9
Aa31LG2G8310 Aethionema arabicum HOM05D007681 ORTHO05D009734 6.2e-22 108.2 117 48.7
Carub.0005s0053 Capsella rubella HOM05D007681 ORTHO05D009734 6.2e-22 108.2 175 39.4
Eucgr.B02939 Eucalyptus grandis HOM05D007681 ORTHO05D009734 6.2e-22 108.2 175 35.4
Sabra10G0080500 Salix brachista HOM05D007681 ORTHO05D009734 6.2e-22 108.2 177 39.0
AT2G01590 Arabidopsis thaliana HOM05D007681 ORTHO05D009734 8.0e-22 107.8 116 49.1
A02p32170 Brassica napus HOM05D007681 ORTHO05D009734 8.0e-22 107.8 128 46.1
BraA02t08231Z Brassica rapa HOM05D007681 ORTHO05D009734 8.0e-22 107.8 128 46.1
ECA233G2077 Erigeron canadensis HOM05D007681 ORTHO05D009734 1.1e-21 107.5 134 43.3
MD13G1021700 Malus domestica HOM05D007681 ORTHO05D009734 1.1e-21 107.5 121 46.3
TAR629G0584 Trochodendron aralioides HOM05D007681 ORTHO05D009734 1.1e-21 107.5 112 47.3
CARHR144140 Cardamine hirsuta HOM05D007681 ORTHO05D009734 1.4e-21 107.1 118 48.3
FvH4_4g34062 Fragaria vesca HOM05D007681 ORTHO05D009734 1.4e-21 107.1 128 46.1
Sp2g13030 Schrenkiella parvula HOM05D007681 ORTHO05D009734 1.4e-21 107.1 118 47.5
Lsat_1_v5_gn_8_44280 Lactuca sativa HOM05D007681 ORTHO05D009734 1.8e-21 106.7 169 37.3
EL10Ac1g01492 Beta vulgaris HOM05D007681 ORTHO05D009734 2.3e-21 106.3 115 45.2
Oeu063591.1 Olea europaea HOM05D007681 ORTHO05D009734 2.3e-21 106.3 168 36.3
CANSAT01G2988 Cannabis sativa HOM05D007681 ORTHO05D009734 3.1e-21 105.9 118 47.5
FAN17G1502 Fragaria x ananassa HOM05D007681 ORTHO05D009734 3.1e-21 105.9 125 45.6
AL5G10680 Arabidopsis lyrata HOM05D007681 ORTHO05D009734 4.0e-21 105.5 118 48.3
Thhalv10005039m.g Eutrema salsugineum HOM05D007681 ORTHO05D009734 4.0e-21 105.5 118 47.5
PGR102G0336 Punica granatum HOM05D007681 ORTHO05D009734 1.5e-20 103.6 135 41.5
PSO017G3157 Papaver somniferum HOM05D007681 ORTHO05D009734 2.0e-20 103.2 118 44.9
Phvul.005G062000 Phaseolus vulgaris HOM05D007681 ORTHO05D009734 2.0e-20 103.2 78 59.0
Rhsim09G0093700 Rhododendron simsii HOM05D007681 ORTHO05D009734 2.0e-20 103.2 120 42.5
unitig_26.g8951 Utricularia gibba HOM05D007681 ORTHO05D009734 2.0e-20 103.2 127 42.5
FAN22G1679 Fragaria x ananassa HOM05D007681 ORTHO05D009734 2.6e-20 102.8 125 44.8
Aqoxy3G00048 Aquilegia oxysepala HOM05D007681 ORTHO05D009734 3.4e-20 102.4 112 46.4
PSO478G3571 Papaver somniferum HOM05D007681 ORTHO05D009734 5.8e-20 101.7 136 41.2
Potri.010G110100 Populus trichocarpa HOM05D007681 ORTHO05D009734 9.8e-20 100.9 177 41.8
RcHm_v2.0_Chr4g0443571 Rosa chinensis HOM05D007681 ORTHO05D009734 1.3e-19 100.5 130 44.6
GSVIVG01011705001 Vitis vinifera HOM05D007681 ORTHO05D009734 1.3e-19 100.5 95 53.7
AUR62013520 Chenopodium quinoa HOM05D007681 ORTHO05D009734 1.7e-19 100.1 171 33.9
Migut.L00587 Erythranthe guttata HOM05D007681 ORTHO05D009734 1.7e-19 100.1 170 41.2
Nitab4.5_0001343g0010 Nicotiana tabacum HOM05D007681 ORTHO05D009734 1.9e-18 96.7 188 36.7
AUR62026755 Chenopodium quinoa HOM05D007681 ORTHO05D009734 3.2e-18 95.9 125 39.2
Nitab4.5_0012949g0010 Nicotiana tabacum HOM05D007681 ORTHO05D009734 1.6e-17 93.6 189 33.9
COL.COLO4_13100 Corchorus olitorius HOM05D006947 ORTHO05D008818 2.7e-17 92.8 120 42.5
MSTRG.7616 Avicennia marina HOM05D007681 ORTHO05D009734 7.8e-17 91.3 170 32.9
HanXRQChr12g0363581 Helianthus annuus HOM05D007681 ORTHO05D009734 8.6e-16 87.8 114 41.2
PGSC0003DMG400015899 Solanum tuberosum HOM05D007681 ORTHO05D009734 1.5e-15 87.0 129 41.9
Sopen05g023100 Solanum pennellii HOM05D007681 ORTHO05D009734 1.9e-15 86.7 163 38.0
Solyc05g026570.3 Solanum lycopersicum HOM05D007681 ORTHO05D009734 2.5e-15 86.3 129 41.1
Nitab4.5_0000018g0170 Nicotiana tabacum HOM05D007681 ORTHO05D009734 1.6e-14 83.6 185 35.7
Lj6A742G71 Lonicera japonica HOM05D007681 ORTHO05D009734 3.6e-14 82.4 88 46.6
Peaxi162Scf00376g00013 Petunia axillaris HOM05D007681 ORTHO05D009734 4.7e-14 82.0 68 54.4
Ah.01g006360 Amaranthus hybridus HOM05D007681 ORTHO05D009734 1.8e-13 80.1 109 41.3
THA.LOC104805073 Tarenaya hassleriana HOM05D007681 ORTHO05D009734 3.1e-13 79.3 121 39.7
MELO3C026423.2 Cucumis melo HOM05D007681 ORTHO05D009734 3.2e-10 69.3 133 37.6
MBI16_g06252_MAGBIO Magnolia biondii HOM05D007681 ORTHO05D009734 3.2e-10 69.3 85 44.7
Os09g0306650 Oryza sativa ssp. japonica HOM05D007681 ORTHO05D009734 4.1e-10 68.9 138 37.0
Zm00001eb309450 Zea mays HOM05D007681 ORTHO05D009734 3.3e-07 59.3 114 35.1
QL03p033908 Quercus lobata HOM05D007681 ORTHO05D009734 2.1e-06 56.6 86 38.4


User provided reference genes

Program Settings