Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0022488 Lotus japonicus HOM05D006676 ORTHO05D008394 4.3e-90 334.7 180 100.0
Glyma.11G060600 Glycine max HOM05D006676 ORTHO05D008394 1.7e-62 243.0 180 72.8
Glyma.01G182300 Glycine max HOM05D006676 ORTHO05D008394 2.9e-62 242.3 180 72.8
Phvul.002G023300 Phaseolus vulgaris HOM05D006676 ORTHO05D008394 5.5e-61 238.0 180 70.6
Lalb_Chr05g0213091 Lupinus albus HOM05D006676 ORTHO05D008394 1.1e-58 230.3 181 71.3
VMungo1215G3052 Vigna mungo HOM05D006676 ORTHO05D008394 2.6e-58 229.2 180 69.4
Ca_24806_v3 Cicer arietinum L. HOM05D006676 ORTHO05D008394 3.3e-58 228.8 180 68.9
arahy.Tifrunner.gnm1.ann1.TQQ6DV Arachis hypogaea HOM05D006676 ORTHO05D008394 2.0e-55 219.5 187 67.4
arahy.Tifrunner.gnm1.ann1.A5DXZZ Arachis hypogaea HOM05D006676 ORTHO05D008394 2.6e-55 219.2 187 67.4
Psat2g163920 Pisum sativum HOM05D006676 ORTHO05D008394 1.1e-50 203.8 189 63.0
QL06p044204 Quercus lobata HOM05D006676 ORTHO05D008394 3.3e-50 202.2 174 66.1
arahy.Tifrunner.gnm1.ann1.MI0500 Arachis hypogaea HOM05D006676 ORTHO05D008394 1.3e-49 200.3 189 63.5
Manes.13G131900 Manihot esculenta HOM05D006676 ORTHO05D008394 3.1e-48 195.7 180 61.1
Dinv26772 Davidia involucrata HOM05D006676 ORTHO05D008394 1.2e-47 193.7 176 63.1
Ciclev10026596m.g Citrus clementina HOM05D006676 ORTHO05D008394 1.7e-46 189.9 176 61.4
TWI09G1529 Tripterygium wilfordii HOM05D006676 ORTHO05D008394 2.2e-46 189.5 182 58.2
FAN23G1040 Fragaria x ananassa HOM05D006676 ORTHO05D008394 5.0e-46 188.3 181 61.9
TAR625G0739 Trochodendron aralioides HOM05D006676 ORTHO05D008394 5.0e-46 188.3 177 61.6
CiPaw.01G028300 Carya illinoinensis HOM05D006676 ORTHO05D008394 2.5e-45 186.0 179 61.5
Nn6g32155 Nelumbo nucifera HOM05D006676 ORTHO05D008394 3.2e-45 185.7 180 60.6
COL.COLO4_22185 Corchorus olitorius HOM05D006676 ORTHO05D008394 4.2e-45 185.3 175 63.4
ClCG02G013070 Citrullus lanatus HOM05D006676 ORTHO05D008394 1.2e-44 183.7 180 58.9
Hma1.2p1_0261F.1_g105020 Hydrangea macrophylla HOM05D006676 ORTHO05D008394 1.6e-44 183.3 177 62.1
PGR102G2956 Punica granatum HOM05D006676 ORTHO05D008394 4.7e-44 181.8 178 61.2
CsaV3_2G017150 Cucumis sativus L. HOM05D006676 ORTHO05D008394 1.4e-43 180.3 180 57.2
Prupe.7G145000 Prunus persica HOM05D006676 ORTHO05D008394 1.4e-43 180.3 180 60.0
FvH4_1g14550 Fragaria vesca HOM05D006676 ORTHO05D008394 1.8e-43 179.9 181 59.7
TPR.G29856 Trifolium pratense HOM05D006676 ORTHO05D008394 2.3e-43 179.5 200 55.0
FAN19G1679 Fragaria x ananassa HOM05D006676 ORTHO05D008394 3.0e-43 179.1 181 59.7
Sed0003061 Sechium edule HOM05D006676 ORTHO05D008394 3.0e-43 179.1 180 58.3
Duzib187G2000 Durio zibethinus HOM05D006676 ORTHO05D008394 4.0e-43 178.7 179 62.6
MELO3C020918.2 Cucumis melo HOM05D006676 ORTHO05D008394 5.2e-43 178.3 180 55.6
Sopen02g015580 Solanum pennellii HOM05D006676 ORTHO05D008394 6.7e-43 177.9 181 58.0
Medtr5g018550 Medicago truncatula HOM05D006676 ORTHO05D008394 1.5e-42 176.8 183 57.4
Thecc.01G046000 Theobroma cacao HOM05D006676 ORTHO05D008394 1.5e-42 176.8 180 61.7
Eucgr.H01944 Eucalyptus grandis HOM05D006676 ORTHO05D008394 2.0e-42 176.4 177 59.9
CANSAT01G0168 Cannabis sativa HOM05D006676 ORTHO05D008394 2.6e-42 176.0 181 58.6
Gorai.003G019600 Gossypium raimondii HOM05D006676 ORTHO05D008394 2.6e-42 176.0 175 60.0
Gohir.D03G019200 Gossypium hirsutum HOM05D006676 ORTHO05D008394 3.3e-42 175.6 175 60.6
ECA232G0167 Erigeron canadensis HOM05D006676 ORTHO05D008394 5.7e-42 174.9 181 61.3
RcHm_v2.0_Chr2g0103301 Rosa chinensis HOM05D006676 ORTHO05D008394 5.7e-42 174.9 180 58.9
MD02G1159200 Malus domestica HOM05D006676 ORTHO05D008394 7.5e-42 174.5 181 58.0
Gohir.A02G161300 Gossypium hirsutum HOM05D006676 ORTHO05D008394 9.7e-42 174.1 175 60.6
Cc07_g05420 Coffea canephora HOM05D006676 ORTHO05D008394 1.3e-41 173.7 178 55.1
MD00G1067500 Malus domestica HOM05D006676 ORTHO05D008394 2.4e-40 169.5 180 55.0
Actinidia36526 Actinidia chinensis HOM05D006676 ORTHO05D008394 4.5e-39 165.2 175 56.0
FAN26G0249 Fragaria x ananassa HOM05D006676 ORTHO05D008394 4.5e-39 165.2 181 55.2
Potri.007G034600 Populus trichocarpa HOM05D006676 ORTHO05D008394 5.9e-39 164.9 186 52.7
MSTRG.15406 Avicennia marina HOM05D006676 ORTHO05D008394 2.9e-38 162.5 178 53.4
Actinidia12084 Actinidia chinensis HOM05D006676 ORTHO05D008394 6.5e-38 161.4 179 54.7
FAN28G2791 Fragaria x ananassa HOM05D006676 ORTHO05D008394 6.5e-38 161.4 181 54.7
Lj7A15T51 Lonicera japonica HOM05D006676 ORTHO05D008394 1.1e-37 160.6 182 56.6
Sabra07G0030200 Salix brachista HOM05D001814 ORTHO05D001845 4.7e-36 155.2 194 51.0
Hund14112 Selenicereus undatus HOM05D006676 ORTHO05D008394 6.1e-36 154.8 184 52.2
Solyc02g065370.3 Solanum lycopersicum HOM05D006676 ORTHO05D008394 1.0e-35 154.1 181 53.0
Oeu032926.1 Olea europaea HOM05D006676 ORTHO05D008394 1.5e-34 150.2 185 54.6
HanXRQChr15g0489591 Helianthus annuus HOM05D006676 ORTHO05D008394 3.4e-34 149.1 177 52.0
PSO675G6281 Papaver somniferum HOM05D006676 ORTHO05D008394 1.1e-32 144.1 180 46.7
Sc16g0001500 Simmondsia chinensis HOM05D006676 ORTHO05D008394 2.4e-32 142.9 183 49.2
EL10Ac6g14836 Beta vulgaris HOM05D006676 ORTHO05D008394 5.4e-32 141.7 186 48.4
Aqoxy6G00953 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 7.0e-32 141.4 186 48.4
Cfa004230 Carpinus fangiana HOM05D006676 ORTHO05D008394 1.2e-31 140.6 248 40.3
AUR62027231 Chenopodium quinoa HOM05D006676 ORTHO05D008394 2.0e-31 139.8 177 50.3
CDE02G4077 Ceratophyllum demersum HOM05D006676 ORTHO05D008394 3.5e-31 139.0 173 50.9
PSO541G6387 Papaver somniferum HOM05D006676 ORTHO05D008394 5.9e-31 138.3 180 46.7
CAN.G93.2 Capsicum annuum HOM05D006676 ORTHO05D008394 2.9e-30 136.0 179 48.0
Duzib147G0589 Durio zibethinus HOM05D006676 ORTHO05D008394 2.9e-30 136.0 178 50.6
Nitab4.5_0000090g0080 Nicotiana tabacum HOM05D006676 ORTHO05D008394 1.9e-29 133.3 181 48.1
Sp7g34680 Schrenkiella parvula HOM05D006676 ORTHO05D008394 1.9e-29 133.3 180 47.2
Rhsim08G0109100 Rhododendron simsii HOM05D006676 ORTHO05D008394 2.5e-29 132.9 272 37.1
Nitab4.5_0002126g0070 Nicotiana tabacum HOM05D006676 ORTHO05D008394 4.2e-29 132.1 181 48.1
PGSC0003DMG400002746 Solanum tuberosum HOM05D006676 ORTHO05D008394 3.6e-28 129.0 181 47.5
AL7G13870 Arabidopsis lyrata HOM05D006676 ORTHO05D008394 1.0e-27 127.5 179 45.3
Carub.0007s0328 Capsella rubella HOM05D006676 ORTHO05D008394 2.3e-27 126.3 183 44.3
DCAR_025672 Daucus carota HOM05D006676 ORTHO05D008394 4.0e-27 125.6 135 56.3
Thhalv10026327m.g Eutrema salsugineum HOM05D006676 ORTHO05D008394 4.0e-27 125.6 185 47.6
Dinv39914 Davidia involucrata HOM05D006676 ORTHO05D008394 2.6e-26 122.9 98 69.4
Cpa.g.sc15.74 Carica papaya HOM05D006676 ORTHO05D008394 5.7e-26 121.7 138 52.2
AT4G37090 Arabidopsis thaliana HOM05D006676 ORTHO05D008394 1.7e-25 120.2 177 44.6
SGA_v2.0_scaffold175G39367 Striga asiatica HOM05D006676 ORTHO05D008394 1.7e-25 120.2 142 54.9
Zm00001eb206480 Zea mays HOM05D006676 ORTHO05D008394 2.2e-25 119.8 171 45.0
Aa31LG6G13890 Aethionema arabicum HOM05D006676 ORTHO05D008394 6.3e-25 118.2 164 43.3
BcaNung03502 Brassica carinata HOM05D006676 ORTHO05D008394 6.3e-25 118.2 178 43.8
BraA01t00181Z Brassica rapa HOM05D006676 ORTHO05D008394 6.3e-25 118.2 179 43.0
CARHR245420 Cardamine hirsuta HOM05D006676 ORTHO05D008394 6.3e-25 118.2 180 43.3
C01p02080 Brassica napus HOM05D006676 ORTHO05D008394 2.4e-24 116.3 178 43.8
BolC1t00200H Brassica oleracea HOM05D006676 ORTHO05D008394 2.4e-24 116.3 178 43.8
A01p01920 Brassica napus HOM05D006676 ORTHO05D008394 3.1e-24 115.9 180 43.3
BolC3t20221H Brassica oleracea HOM05D006676 ORTHO05D008394 3.1e-24 115.9 178 43.8
Os02g0186700 Oryza sativa ssp. japonica HOM05D006676 ORTHO05D008394 5.4e-24 115.2 183 42.6
AUR62003241 Chenopodium quinoa HOM05D006676 ORTHO05D008394 9.2e-24 114.4 177 44.6
HPP92_004789 Vanilla planifolia HOM05D006676 ORTHO05D008394 2.7e-23 112.8 219 37.9
arahy.Tifrunner.gnm1.ann1.9JJG5X Arachis hypogaea HOM05D006676 ORTHO05D008394 1.0e-22 110.9 126 54.8
SGA_v2.0_scaffold1G00184 Striga asiatica HOM05D006676 ORTHO05D008394 1.7e-22 110.2 135 53.3
MBI04_g03667_MAGBIO Magnolia biondii HOM05D006676 ORTHO05D008394 3.8e-22 109.0 154 47.4
Migut.K00838 Erythranthe guttata HOM05D006676 ORTHO05D008394 6.6e-22 108.2 189 41.3
BraA08t34206Z Brassica rapa HOM05D006676 ORTHO05D008394 8.6e-22 107.8 181 43.1
BcaC01g00433 Brassica carinata HOM05D006676 ORTHO05D008394 1.1e-21 107.5 178 42.7
C03p79700 Brassica napus HOM05D006676 ORTHO05D008394 1.1e-21 107.5 178 42.7
vmacro17885 Vaccinium macrocarpon HOM05D006676 ORTHO05D008394 1.1e-21 107.5 227 41.0
unitig_749.g13556 Utricularia gibba HOM05D006676 ORTHO05D008394 1.5e-21 107.1 156 44.2
Ah.02g126080 Amaranthus hybridus HOM05D006676 ORTHO05D008394 1.6e-20 103.6 148 44.6
Peaxi162Scf00019g02117 Petunia axillaris HOM05D006676 ORTHO05D008394 2.1e-20 103.2 176 40.9
A08p22510 Brassica napus HOM05D006676 ORTHO05D008394 6.8e-19 98.2 181 41.4
GSVIVG01005096001 Vitis vinifera HOM05D006676 ORTHO05D008394 2.0e-18 96.7 98 56.1
GSVIVG01004606001 Vitis vinifera HOM05D006676 ORTHO05D008394 2.6e-18 96.3 98 55.1
THA.LOC104819832 Tarenaya hassleriana HOM05D006676 ORTHO05D008394 5.7e-18 95.1 182 41.2
Sc16g0001490 Simmondsia chinensis HOM05D006676 ORTHO05D008394 2.7e-15 86.3 82 56.1
Aqoxy2G03321 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 2.3e-14 83.2 139 42.4
Aqoxy6G00951 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 2.3e-14 83.2 139 42.4
MBI15_g03557_MAGBIO Magnolia biondii HOM05D006676 ORTHO05D008394 5.6e-13 78.6 87 55.2
Haze_15170 Corylus avellana HOM05D006676 ORTHO05D008394 1.1e-11 74.3 183 33.9
CDE01G0251 Ceratophyllum demersum HOM05D006676 ORTHO05D008394 5.8e-10 68.6 85 47.1
BcaB03g12363 Brassica carinata HOM05D006676 ORTHO05D008394 2.9e-09 66.2 62 51.6
ATR0800G049 Amborella trichopoda HOM05D006676 ORTHO05D008394 1.2e-07 60.8 81 45.7
BcaB03g12365 Brassica carinata HOM05D006676 ORTHO05D008394 1.2e-07 60.8 56 50.0


User provided reference genes

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