Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0022146 Lotus japonicus HOM05D008092 ORTHO05D010277 1.8e-148 529.3 279 100.0
Phvul.004G010900 Phaseolus vulgaris HOM05D008092 ORTHO05D010277 3.2e-68 262.7 266 61.7
TPR.G14075 Trifolium pratense HOM05D008092 ORTHO05D010277 7.7e-62 241.5 268 56.7
Psat1g056120 Pisum sativum HOM05D008092 ORTHO05D010277 2.9e-61 239.6 269 57.2
arahy.Tifrunner.gnm1.ann1.M07V8F Arachis hypogaea HOM05D008092 ORTHO05D010277 3.8e-61 239.2 280 56.8
Glyma.05G005000 Glycine max HOM05D008092 ORTHO05D010277 3.8e-61 239.2 269 57.6
arahy.Tifrunner.gnm1.ann1.KZ8L38 Arachis hypogaea HOM05D008092 ORTHO05D010277 1.6e-59 233.8 274 56.2
VMungo0464G1885 Vigna mungo HOM05D008092 ORTHO05D010277 3.7e-56 222.6 266 54.5
Glyma.19G005600 Glycine max HOM05D008092 ORTHO05D010277 4.0e-50 202.6 174 64.9
Lalb_Chr02g0156941 Lupinus albus HOM05D008092 ORTHO05D010277 1.5e-49 200.7 218 55.5
Medtr6g005430 Medicago truncatula HOM05D008092 ORTHO05D010277 1.2e-46 191.0 251 51.4
CiPaw.03G041800 Carya illinoinensis HOM05D008092 ORTHO05D010277 1.2e-38 164.5 187 52.4
Cfa007393 Carpinus fangiana HOM05D008092 ORTHO05D010277 1.0e-37 161.4 217 47.0
CiPaw.02G035400 Carya illinoinensis HOM05D008092 ORTHO05D010277 4.3e-36 156.0 184 51.1
QL02p075225 Quercus lobata HOM05D008092 ORTHO05D010277 5.6e-36 155.6 173 52.0
QL93p1842_0091 Quercus lobata HOM05D008092 ORTHO05D010277 7.3e-36 155.2 173 52.0
Gorai.011G095100 Gossypium raimondii HOM05D008092 ORTHO05D010277 3.0e-34 149.8 188 46.8
Gohir.A10G102700 Gossypium hirsutum HOM05D008092 ORTHO05D010277 1.2e-33 147.9 188 46.3
Gohir.D10G086900 Gossypium hirsutum HOM05D008092 ORTHO05D010277 1.2e-33 147.9 188 46.3
Duzib187G1326 Durio zibethinus HOM05D008092 ORTHO05D010277 3.4e-33 146.4 185 46.5
CANSAT64G0606 Cannabis sativa HOM05D008092 ORTHO05D010277 7.5e-33 145.2 244 41.4
TWI36G1451 Tripterygium wilfordii HOM05D008092 ORTHO05D010277 9.8e-33 144.8 203 48.3
Atru.chr6.2355 Acer truncatum HOM05D008092 ORTHO05D010277 1.7e-32 144.1 205 44.4
COL.COLO4_29084 Corchorus olitorius HOM05D008092 ORTHO05D010277 2.2e-32 143.7 175 48.6
Thecc.04G015000 Theobroma cacao HOM05D008092 ORTHO05D010277 2.9e-32 143.3 168 48.8
CiPaw.04G027500 Carya illinoinensis HOM05D008092 ORTHO05D010277 8.3e-32 141.7 218 44.0
Manes.17G115000 Manihot esculenta HOM05D008092 ORTHO05D010277 1.1e-31 141.4 215 45.1
Dinv33463 Davidia involucrata HOM05D008092 ORTHO05D010277 1.2e-30 137.9 201 45.8
Sc03g0007590 Simmondsia chinensis HOM05D008092 ORTHO05D010277 1.6e-30 137.5 177 45.8
TAR374G1215 Trochodendron aralioides HOM05D008092 ORTHO05D010277 2.0e-30 137.1 264 39.0
GSVIVG01032429001 Vitis vinifera HOM05D008092 ORTHO05D010277 1.0e-29 134.8 207 45.4
Prupe.3G289300 Prunus persica HOM05D008092 ORTHO05D010277 3.9e-29 132.9 188 43.6
vmacro05852 Vaccinium macrocarpon HOM05D008092 ORTHO05D010277 5.6e-28 129.0 187 43.9
MBI10_g33304_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 3.1e-26 123.2 165 48.5
TPR.G15211 Trifolium pratense HOM05D008092 ORTHO05D010277 5.2e-26 122.5 118 60.2
CSS0000484 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 8.9e-26 121.7 173 44.5
CSS0015151 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 8.9e-26 121.7 173 44.5
MD17G1030500 Malus domestica HOM05D008092 ORTHO05D010277 8.9e-26 121.7 251 38.2
Cc00_g25440 Coffea canephora HOM05D008092 ORTHO05D010277 1.2e-25 121.3 143 49.0
Actinidia06006 Actinidia chinensis HOM05D008092 ORTHO05D010277 1.7e-24 117.5 176 40.9
Lsat_1_v5_gn_4_183520 Lactuca sativa HOM05D008092 ORTHO05D010277 6.4e-24 115.5 166 42.8
CDE02G4384 Ceratophyllum demersum HOM05D008092 ORTHO05D010277 2.4e-23 113.6 182 37.9
CsaV3_3G042670 Cucumis sativus L. HOM05D008092 ORTHO05D010277 2.4e-23 113.6 208 38.9
PGR083G2137 Punica granatum HOM05D008092 ORTHO05D010277 2.4e-23 113.6 164 44.5
Cpa.g.sc108.51 Carica papaya HOM05D008092 ORTHO05D010277 7.0e-23 112.1 186 44.1
HanXRQChr09g0255051 Helianthus annuus HOM05D008092 ORTHO05D010277 1.6e-22 110.9 201 40.3
Eucgr.I01759 Eucalyptus grandis HOM05D008092 ORTHO05D010277 6.0e-22 109.0 122 46.7
Nitab4.5_0000118g0190 Nicotiana tabacum HOM05D008092 ORTHO05D010277 2.3e-21 107.1 132 49.2
MBI10_g44380_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 3.9e-21 106.3 165 45.5
Rhsim10G0018500 Rhododendron simsii HOM05D008092 ORTHO05D010277 6.6e-21 105.5 231 34.2
DCAR_021714 Daucus carota HOM05D008092 ORTHO05D010277 8.1e-19 98.6 155 38.1
HPP92_003083 Vanilla planifolia HOM05D008092 ORTHO05D010277 1.8e-18 97.4 161 36.6
Eucgr.I01763 Eucalyptus grandis HOM05D008092 ORTHO05D010277 9.9e-17 91.7 116 44.0
ECA232G1487 Erigeron canadensis HOM05D008092 ORTHO05D010277 2.7e-14 83.6 138 39.9
PSO478G3237 Papaver somniferum HOM05D008092 ORTHO05D010277 3.5e-14 83.2 70 51.4
PSO017G5173 Papaver somniferum HOM05D008092 ORTHO05D010277 1.0e-13 81.6 70 50.0
Haze_14716 Corylus avellana HOM05D008092 ORTHO05D010277 3.9e-13 79.7 174 38.5
TPR.G11017 Trifolium pratense HOM05D008092 ORTHO05D010277 1.9e-12 77.4 66 63.6
Haze_14721 Corylus avellana HOM05D008092 ORTHO05D010277 5.6e-12 75.9 120 43.3
Oeu063467.1 Olea europaea HOM05D008092 ORTHO05D010277 2.0e-09 67.4 103 41.7
Nn3g16773 Nelumbo nucifera HOM05D008092 ORTHO05D010277 4.4e-09 66.2 63 47.6
Pp3c2_13540 Physcomitrium patens HOM05D008092 ORTHO05D010277 3.2e-07 60.1 226 29.2
MELO3C009977.2 Cucumis melo HOM05D008092 ORTHO05D010277 9.2e-07 58.5 99 37.4


User provided reference genes

Program Settings