Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0012687 Lotus japonicus HOM05D016976 ORTHO05D000174 1.7e-128 462.6 222 100.0
Lj2g0021969 Lotus japonicus HOM05D016976 ORTHO05D000174 1.7e-128 462.6 222 100.0
LjContig00222g0021817 Lotus japonicus HOM05D016976 ORTHO05D000174 4.5e-113 411.4 222 91.0
Lj4g0011376 Lotus japonicus HOM05D016976 ORTHO05D236212 3.3e-39 166.0 79 100.0
Lj1g0016749 Lotus japonicus HOM05D016976 ORTHO05D236790 6.4e-35 151.8 100 72.0
Lj2g0015458 Lotus japonicus HOM05D000353 ORTHO05D000174 2.1e-17 93.6 77 55.8
Lj1g0020814 Lotus japonicus HOM05D016976 ORTHO05D000174 1.5e-15 87.4 154 35.1
Lj2g0018579 Lotus japonicus HOM05D007499 ORTHO05D000174 8.1e-14 81.6 71 54.9
Medtr6g051890 Medicago truncatula HOM05D000353 ORTHO05D000174 4.6e-09 65.9 75 40.0
Medtr8g059025 Medicago truncatula HOM05D000353 ORTHO05D000174 3.9e-08 62.8 73 41.1
Psat4g107960 Pisum sativum HOM05D016976 ORTHO05D000174 6.7e-08 62.0 131 29.0
TPR.G7703 Trifolium pratense HOM05D000353 ORTHO05D000174 6.7e-08 62.0 73 39.7
Glyma.16G074500 Glycine max HOM05D016976 ORTHO05D000174 1.1e-07 61.2 60 45.0
Lj1g0017581 Lotus japonicus HOM05D000353 ORTHO05D000174 1.5e-07 60.8 78 33.3
Medtr5g078250 Medicago truncatula HOM05D000353 ORTHO05D000174 1.9e-07 60.5 72 38.9
Lj2g0019243 Lotus japonicus HOM05D007499 ORTHO05D010522 2.5e-07 60.1 150 30.0
Lj4g0000768 Lotus japonicus HOM05D007499 ORTHO05D000174 2.5e-07 60.1 76 39.5
Lj6g0022343 Lotus japonicus HOM05D007499 ORTHO05D010522 2.5e-07 60.1 150 30.0
LjContig00389g0005000 Lotus japonicus HOM05D007499 ORTHO05D010522 2.5e-07 60.1 150 30.0
Lj1g0016702 Lotus japonicus HOM05D007499 ORTHO05D000174 3.3e-07 59.7 78 38.5
Medtr1g075850 Medicago truncatula HOM05D000353 ORTHO05D000174 7.4e-07 58.5 72 36.1
Medtr8g062030 Medicago truncatula HOM05D000353 ORTHO05D000174 1.3e-06 57.8 71 38.0
arahy.Tifrunner.gnm1.ann1.AKH4BK Arachis hypogaea HOM05D000353 ORTHO05D000174 1.6e-06 57.4 75 34.7
arahy.Tifrunner.gnm1.ann1.CPRZ31 Arachis hypogaea HOM05D000353 ORTHO05D000174 1.6e-06 57.4 75 34.7
arahy.Tifrunner.gnm1.ann1.IYP2GG Arachis hypogaea HOM05D000353 ORTHO05D000174 1.6e-06 57.4 75 34.7
arahy.Tifrunner.gnm1.ann1.J9NJUF Arachis hypogaea HOM05D000353 ORTHO05D000174 1.6e-06 57.4 75 34.7
arahy.Tifrunner.gnm1.ann1.LSFF47 Arachis hypogaea HOM05D000353 ORTHO05D000174 1.6e-06 57.4 75 34.7
arahy.Tifrunner.gnm1.ann1.Y6YSHD Arachis hypogaea HOM05D000353 ORTHO05D000174 1.6e-06 57.4 75 34.7
Medtr3g037500 Medicago truncatula HOM05D036319 ORTHO05D000174 4.8e-06 55.8 87 35.6
AL5G11810 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 6.2e-06 55.5 62 38.7


User provided reference genes

Program Settings