Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0021598 Lotus japonicus HOM05D006875 ORTHO05D008416 2.5e-76 288.9 166 100.0
Ca_25148_v3 Cicer arietinum L. HOM05D006875 ORTHO05D008416 9.3e-39 164.1 166 60.2
Lalb_Chr05g0215561 Lupinus albus HOM05D006875 ORTHO05D008416 4.6e-38 161.8 166 59.6
Medtr5g027470 Medicago truncatula HOM05D006875 ORTHO05D008416 2.3e-37 159.5 166 58.4
Lalb_Chr16g0380861 Lupinus albus HOM05D006875 ORTHO05D008416 1.9e-36 156.4 169 59.8
VMungo1215G2146 Vigna mungo HOM05D006875 ORTHO05D008416 4.8e-35 151.8 166 57.8
TPR.G9090 Trifolium pratense HOM05D006875 ORTHO05D008416 6.2e-35 151.4 166 55.4
Phvul.002G132700 Phaseolus vulgaris HOM05D006875 ORTHO05D008416 2.0e-33 146.4 163 57.1
Glyma.01G009800 Glycine max HOM05D006875 ORTHO05D008416 3.4e-33 145.6 163 57.1
Potri.001G133600 Populus trichocarpa HOM05D006875 ORTHO05D008416 3.8e-32 142.1 115 67.8
Sabra01G0103300 Salix brachista HOM05D006875 ORTHO05D008416 8.4e-32 141.0 100 72.0
Dinv29039 Davidia involucrata HOM05D006875 ORTHO05D008416 1.1e-31 140.6 171 52.6
CiPaw.12G070200 Carya illinoinensis HOM05D006875 ORTHO05D008416 1.4e-31 140.2 172 54.1
Glyma.09G211300 Glycine max HOM05D006875 ORTHO05D008416 1.4e-31 140.2 163 57.1
arahy.Tifrunner.gnm1.ann1.7H2E39 Arachis hypogaea HOM05D006875 ORTHO05D008416 2.5e-31 139.4 106 72.6
arahy.Tifrunner.gnm1.ann1.J2I619 Arachis hypogaea HOM05D006875 ORTHO05D008416 2.5e-31 139.4 106 72.6
Duzib205G1866 Durio zibethinus HOM05D006875 ORTHO05D008416 4.2e-31 138.7 121 66.1
Prupe.5G024300 Prunus persica HOM05D006875 ORTHO05D008416 4.2e-31 138.7 173 52.6
RcHm_v2.0_Chr7g0212891 Rosa chinensis HOM05D006875 ORTHO05D008416 4.2e-31 138.7 174 54.0
CsaV3_3G030390 Cucumis sativus L. HOM05D006875 ORTHO05D008416 1.6e-30 136.7 173 56.6
Actinidia18144 Actinidia chinensis HOM05D006875 ORTHO05D008416 2.7e-30 136.0 179 48.6
Oeu044464.1 Olea europaea HOM05D006875 ORTHO05D008416 3.5e-30 135.6 95 73.7
A06p46520 Brassica napus HOM05D006875 ORTHO05D008416 1.0e-29 134.0 172 51.2
BolC7t43404H Brassica oleracea HOM05D006875 ORTHO05D008416 1.0e-29 134.0 172 51.7
BraA06t27526Z Brassica rapa HOM05D006875 ORTHO05D008416 1.0e-29 134.0 172 51.2
CSS0027486 Camellia sinensis var. sinensis HOM05D006875 ORTHO05D008416 1.8e-29 133.3 184 48.9
Sed0011128 Sechium edule HOM05D006875 ORTHO05D008416 1.8e-29 133.3 101 73.3
Sp2g10480 Schrenkiella parvula HOM05D006875 ORTHO05D008416 3.9e-29 132.1 171 50.3
Actinidia14761 Actinidia chinensis HOM05D006875 ORTHO05D008416 5.1e-29 131.7 177 49.2
BcaC06g31539 Brassica carinata HOM05D006875 ORTHO05D008416 5.1e-29 131.7 171 50.9
BcaC06g34424 Brassica carinata HOM05D006875 ORTHO05D008416 1.1e-28 130.6 172 51.2
C07p28660 Brassica napus HOM05D006875 ORTHO05D008416 1.1e-28 130.6 172 51.2
Duzib068G0693 Durio zibethinus HOM05D006875 ORTHO05D008416 1.1e-28 130.6 93 71.0
AL8G13090 Arabidopsis lyrata HOM05D006875 ORTHO05D008416 2.5e-28 129.4 173 50.3
Carub.0008s0244 Capsella rubella HOM05D006875 ORTHO05D008416 2.5e-28 129.4 127 59.1
GSVIVG01011544001 Vitis vinifera HOM05D006875 ORTHO05D008416 3.3e-28 129.0 133 57.9
MSTRG.13901 Avicennia marina HOM05D006875 ORTHO05D008416 7.4e-28 127.9 182 47.8
Cfa012555 Carpinus fangiana HOM05D006875 ORTHO05D008416 7.4e-28 127.9 136 59.6
Gohir.D08G173100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 7.4e-28 127.9 129 62.8
CARHR176440 Cardamine hirsuta HOM05D006875 ORTHO05D008416 9.6e-28 127.5 184 48.4
Thhalv10001052m.g Eutrema salsugineum HOM05D006875 ORTHO05D008416 9.6e-28 127.5 175 50.3
SalBow4G1271 Salvia bowleyana HOM05D006875 ORTHO05D008416 9.6e-28 127.5 167 50.9
Aa31LG9G7450 Aethionema arabicum HOM05D006875 ORTHO05D008416 1.3e-27 127.1 180 46.7
AT5G45590 Arabidopsis thaliana HOM05D006875 ORTHO05D008416 1.6e-27 126.7 123 60.2
Nitab4.5_0000109g0180 Nicotiana tabacum HOM05D006875 ORTHO05D008416 2.1e-27 126.3 166 51.2
SGA_v2.0_scaffold144G35866 Striga asiatica HOM05D006875 ORTHO05D008416 2.1e-27 126.3 126 59.5
EL10Ac5g11986 Beta vulgaris HOM05D006875 ORTHO05D008416 2.8e-27 125.9 130 58.5
A02p29280 Brassica napus HOM05D006875 ORTHO05D008416 2.8e-27 125.9 81 77.8
BraA02t07958Z Brassica rapa HOM05D006875 ORTHO05D008416 2.8e-27 125.9 81 77.8
Peaxi162Scf00185g01627 Petunia axillaris HOM05D006875 ORTHO05D008416 3.7e-27 125.6 174 48.3
BcaC03g16779 Brassica carinata HOM05D006875 ORTHO05D008416 4.8e-27 125.2 170 49.4
BolC2t10706H Brassica oleracea HOM05D006875 ORTHO05D008416 4.8e-27 125.2 170 49.4
Hund14386 Selenicereus undatus HOM05D006875 ORTHO05D008416 4.8e-27 125.2 129 56.6
CDE05G0418 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 6.2e-27 124.8 119 61.3
THA.LOC104806179 Tarenaya hassleriana HOM05D006875 ORTHO05D008416 6.2e-27 124.8 178 48.3
Solyc06g066190.3 Solanum lycopersicum HOM05D006875 ORTHO05D008416 8.2e-27 124.4 171 46.8
Sopen06g024670 Solanum pennellii HOM05D006875 ORTHO05D008416 8.2e-27 124.4 171 46.8
HanXRQChr16g0510981 Helianthus annuus HOM05D006875 ORTHO05D008416 1.4e-26 123.6 169 47.3
Nn1g01960 Nelumbo nucifera HOM05D006875 ORTHO05D008416 1.4e-26 123.6 133 54.9
PGSC0003DMG400020470 Solanum tuberosum HOM05D006875 ORTHO05D008416 1.4e-26 123.6 173 46.8
Ah.12g055650 Amaranthus hybridus HOM05D006875 ORTHO05D008416 4.0e-26 122.1 131 56.5
Cc08_g04080 Coffea canephora HOM05D006875 ORTHO05D008416 4.0e-26 122.1 103 65.0
C02p46480 Brassica napus HOM05D006875 ORTHO05D008416 5.3e-26 121.7 170 48.8
MELO3C022766.2 Cucumis melo HOM05D006875 ORTHO05D008416 9.0e-26 120.9 135 62.2
Nitab4.5_0005761g0030 Nicotiana tabacum HOM05D006875 ORTHO05D008416 9.0e-26 120.9 188 45.7
Eucgr.D02619 Eucalyptus grandis HOM05D006875 ORTHO05D008416 1.2e-25 120.6 122 59.8
Sc01g0006090 Simmondsia chinensis HOM05D006875 ORTHO05D008416 1.5e-25 120.2 129 54.3
Potri.003G099900 Populus trichocarpa HOM05D006875 ORTHO05D008416 2.0e-25 119.8 178 47.8
Migut.E01333 Erythranthe guttata HOM05D006875 ORTHO05D008416 2.6e-25 119.4 135 54.8
TAR629G1490 Trochodendron aralioides HOM05D006875 ORTHO05D008416 2.6e-25 119.4 125 60.0
FAN04G1681 Fragaria x ananassa HOM05D006875 ORTHO05D008416 1.0e-24 117.5 170 50.0
FAN13G1224 Fragaria x ananassa HOM05D006875 ORTHO05D008416 1.7e-24 116.7 103 66.0
FAN08G3065 Fragaria x ananassa HOM05D006875 ORTHO05D008416 2.9e-24 115.9 132 57.6
Aqoxy3G02082 Aquilegia oxysepala HOM05D006875 ORTHO05D008416 6.5e-24 114.8 89 67.4
FvH4_5g23590 Fragaria vesca HOM05D006875 ORTHO05D008416 6.5e-24 114.8 134 58.2
FAN18G3946 Fragaria x ananassa HOM05D006875 ORTHO05D008416 6.5e-24 114.8 134 58.2
FAN18G3512 Fragaria x ananassa HOM05D006875 ORTHO05D008416 8.4e-24 114.4 134 58.2
CANSAT21G2454 Cannabis sativa HOM05D006875 ORTHO05D008416 1.1e-23 114.0 173 46.8
TWI23G0606 Tripterygium wilfordii HOM05D006875 ORTHO05D008416 1.1e-23 114.0 112 61.6
Atru.chr6.1576 Acer truncatum HOM05D006875 ORTHO05D008416 1.4e-23 113.6 115 60.0
Hma1.2p1_0979F.1_g243510 Hydrangea macrophylla HOM05D006875 ORTHO05D008416 1.4e-23 113.6 175 46.3
unitig_0.g2213 Utricularia gibba HOM05D006875 ORTHO05D008416 1.9e-23 113.2 120 55.0
PSO063G1678 Papaver somniferum HOM05D006875 ORTHO05D008416 4.2e-23 112.1 89 68.5
PSO782G2435 Papaver somniferum HOM05D006875 ORTHO05D008416 4.2e-23 112.1 89 68.5
Psat2g139680 Pisum sativum HOM05D006875 ORTHO05D008416 7.1e-23 111.3 136 52.9
Sabra03G0067900 Salix brachista HOM05D006875 ORTHO05D008416 2.1e-22 109.8 93 64.5
Thecc.03G314400 Theobroma cacao HOM05D006875 ORTHO05D008416 4.6e-22 108.6 114 59.6
Ciclev10002495m.g Citrus clementina HOM05D006875 ORTHO05D008416 6.1e-22 108.2 111 59.5
Manes.17G011100 Manihot esculenta HOM05D006875 ORTHO05D008416 7.9e-22 107.8 64 81.2
Os10g0579500 Oryza sativa ssp. japonica HOM05D006875 ORTHO05D008416 3.9e-21 105.5 92 62.0
Gohir.A08G152100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 5.1e-21 105.1 120 58.3
Zm00001eb025290 Zea mays HOM05D006875 ORTHO05D008416 6.7e-21 104.8 140 46.4
Cpa.g.c33846 Carica papaya HOM05D006875 ORTHO05D008416 8.2e-19 97.8 72 76.4
COL.COLO4_16883 Corchorus olitorius HOM05D006875 ORTHO05D008416 1.1e-18 97.4 117 54.7
MD00G1000200 Malus domestica HOM05D006875 ORTHO05D008416 1.1e-18 97.4 113 54.0
HPP92_025490 Vanilla planifolia HOM05D006875 ORTHO05D008416 3.1e-18 95.9 71 71.8
Haze_08105 Corylus avellana HOM05D006875 ORTHO05D008416 2.6e-17 92.8 63 74.6
Gorai.004G180500 Gossypium raimondii HOM05D006875 ORTHO05D008416 2.6e-17 92.8 125 53.6
Mapoly0025s0027 Marchantia polymorpha HOM05D006875 ORTHO05D008416 6.5e-16 88.2 103 49.5
Pp3c9_12060 Physcomitrium patens HOM05D006875 ORTHO05D008416 1.4e-15 87.0 71 60.6
ClCG07G002300 Citrullus lanatus HOM05D006875 ORTHO05D008416 1.9e-15 86.7 108 57.4
vmacro14218 Vaccinium macrocarpon HOM05D006875 ORTHO05D008416 4.2e-15 85.5 203 35.5
ECA233G1303 Erigeron canadensis HOM05D000321 ORTHO05D000204 2.1e-14 83.2 68 61.8
AagrBONN_evm.TU.Sc2ySwM_362.254 Anthoceros agrestis HOM05D006875 ORTHO05D008416 6.1e-14 81.6 70 61.4
Haze_08111 Corylus avellana HOM05D006875 ORTHO05D008416 1.8e-13 80.1 144 44.4
ATR0829G201 Amborella trichopoda HOM05D006875 ORTHO05D008416 2.5e-12 76.3 59 64.4
RcHm_v2.0_Chr1g0382651 Rosa chinensis HOM05D006875 ORTHO05D008416 3.3e-12 75.9 45 77.8
SHI45156 Sapria himalayana HOM05D006875 ORTHO05D008416 3.3e-12 75.9 76 51.3
CDE11G0569 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 4.3e-12 75.5 53 67.9
QL12p000430 Quercus lobata HOM05D006875 ORTHO05D008416 1.3e-11 73.9 101 50.5
PGR031G1815 Punica granatum HOM05D006875 ORTHO05D008416 1.7e-11 73.6 99 51.5
Rhsim07G0136500 Rhododendron simsii HOM05D006875 ORTHO05D008416 2.2e-11 73.2 106 48.1
SEGI_22250 Sequoiadendron giganteum HOM05D006875 ORTHO05D008416 1.5e-09 67.0 85 45.9
Lsat_1_v5_gn_3_43041 Lactuca sativa HOM05D006875 ORTHO05D008416 1.0e-08 64.3 130 41.5
MD06G1023100 Malus domestica HOM05D006875 ORTHO05D008416 7.2e-07 58.2 144 38.9


User provided reference genes

Program Settings