Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0021118 Lotus japonicus HOM05D006197 ORTHO05D007718 2.0e-52 208.8 100 100.0
Medtr5g013975 Medicago truncatula HOM05D006197 ORTHO05D007718 2.8e-38 161.8 106 77.4
Ca_24632_v3 Cicer arietinum L. HOM05D006197 ORTHO05D007718 5.2e-37 157.5 102 73.5
Glyma.01G201200 Glycine max HOM05D006197 ORTHO05D007718 2.6e-36 155.2 105 70.5
Psat2g174760 Pisum sativum HOM05D006197 ORTHO05D007718 4.4e-36 154.5 103 73.8
Glyma.11G041000 Glycine max HOM05D006197 ORTHO05D007718 2.2e-35 152.1 102 71.6
VMungo1215G1228 Vigna mungo HOM05D006197 ORTHO05D007718 4.2e-34 147.9 103 69.9
Phvul.002G004500 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 5.4e-34 147.5 101 70.3
VMungo1215G3393 Vigna mungo HOM05D006197 ORTHO05D007718 1.6e-33 146.0 104 69.2
arahy.Tifrunner.gnm1.ann1.M9L3KI Arachis hypogaea HOM05D006197 ORTHO05D007718 3.5e-33 144.8 105 65.7
arahy.Tifrunner.gnm1.ann1.PC0NS4 Arachis hypogaea HOM05D006197 ORTHO05D007718 3.5e-33 144.8 105 65.7
AUR62007231 Chenopodium quinoa HOM05D006197 ORTHO05D007718 5.1e-32 141.0 100 71.0
AUR62018769 Chenopodium quinoa HOM05D006197 ORTHO05D007718 1.3e-30 136.3 100 70.0
Haze_08298 Corylus avellana HOM05D006197 ORTHO05D007718 2.8e-30 135.2 101 69.3
EL10Ac5g12195 Beta vulgaris HOM05D006197 ORTHO05D007718 3.6e-30 134.8 100 69.0
Cfa012386 Carpinus fangiana HOM05D006197 ORTHO05D007718 1.1e-29 133.3 101 69.3
Phvul.002G003700 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 4.0e-29 131.3 101 64.4
Ah.12g053650 Amaranthus hybridus HOM05D006197 ORTHO05D007718 1.2e-28 129.8 100 66.0
Rhsim11G0011100 Rhododendron simsii HOM05D006197 ORTHO05D007718 1.2e-28 129.8 102 63.7
Nitab4.5_0006693g0020 Nicotiana tabacum HOM05D006197 ORTHO05D007718 1.5e-28 129.4 103 64.1
Nitab4.5_0002055g0120 Nicotiana tabacum HOM05D006197 ORTHO05D007718 2.0e-28 129.0 103 64.1
Potri.001G146700 Populus trichocarpa HOM05D006197 ORTHO05D007718 4.4e-28 127.9 100 62.0
Prupe.5G046200 Prunus persica HOM05D006197 ORTHO05D007718 4.4e-28 127.9 101 67.3
GSVIVG01013230001 Vitis vinifera HOM05D006197 ORTHO05D007718 4.4e-28 127.9 102 65.7
Lsat_1_v5_gn_6_66400 Lactuca sativa HOM05D006197 ORTHO05D007718 5.8e-28 127.5 111 62.2
Lalb_Chr09g0323941 Lupinus albus HOM05D006197 ORTHO05D007718 1.3e-27 126.3 118 59.3
unitig_747.g21291 Utricularia gibba HOM05D006197 ORTHO05D007718 1.3e-27 126.3 103 63.1
Hma1.2p1_0311F.1_g121310 Hydrangea macrophylla HOM05D006197 ORTHO05D007718 1.7e-27 125.9 101 63.4
PGSC0003DMG400024214 Solanum tuberosum HOM05D006197 ORTHO05D007718 1.7e-27 125.9 103 62.1
Sopen05g026900 Solanum pennellii HOM05D006197 ORTHO05D007718 2.9e-27 125.2 103 61.2
Sopen08g025860 Solanum pennellii HOM05D006197 ORTHO05D007718 2.9e-27 125.2 103 61.2
CiPaw.11G087500 Carya illinoinensis HOM05D006197 ORTHO05D007718 3.8e-27 124.8 102 61.8
MD16G1269400 Malus domestica HOM05D006197 ORTHO05D007718 4.9e-27 124.4 101 64.4
Solyc08g077280.1 Solanum lycopersicum HOM05D006197 ORTHO05D007718 4.9e-27 124.4 103 61.2
TWI81G0993 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 4.9e-27 124.4 101 65.3
A07p24860 Brassica napus HOM05D006197 ORTHO05D007718 6.4e-27 124.0 102 66.7
BraA07t30130Z Brassica rapa HOM05D006197 ORTHO05D007718 6.4e-27 124.0 102 66.7
Oeu006551.1 Olea europaea HOM05D006197 ORTHO05D007718 8.4e-27 123.6 103 62.1
Peaxi162Scf00084g00099 Petunia axillaris HOM05D006197 ORTHO05D007718 8.4e-27 123.6 98 64.3
Oeu014592.2 Olea europaea HOM05D006197 ORTHO05D007718 1.4e-26 122.9 103 61.2
Cpa.g.sc6.409 Carica papaya HOM05D006197 ORTHO05D007718 1.9e-26 122.5 102 62.7
Cc00_g30230 Coffea canephora HOM05D006197 ORTHO05D007718 1.9e-26 122.5 103 61.2
Cc08_g01810 Coffea canephora HOM05D006197 ORTHO05D007718 1.9e-26 122.5 103 61.2
Manes.15G173000 Manihot esculenta HOM05D006197 ORTHO05D007718 1.9e-26 122.5 100 63.0
Cc00_g23310 Coffea canephora HOM05D006197 ORTHO05D007718 2.4e-26 122.1 103 60.2
Atru.chr6.1773 Acer truncatum HOM05D006197 ORTHO05D007718 3.2e-26 121.7 100 63.0
RcHm_v2.0_Chr7g0208331 Rosa chinensis HOM05D006197 ORTHO05D007718 3.2e-26 121.7 100 65.0
ECA240G0414 Erigeron canadensis HOM05D006197 ORTHO05D007718 4.2e-26 121.3 106 60.4
FAN04G1051 Fragaria x ananassa HOM05D006197 ORTHO05D007718 4.2e-26 121.3 100 66.0
PGR042G3581 Punica granatum HOM05D006197 ORTHO05D007718 4.2e-26 121.3 101 64.4
Dinv28915 Davidia involucrata HOM05D006197 ORTHO05D007718 5.4e-26 120.9 102 62.7
FAN18G0540 Fragaria x ananassa HOM05D006197 ORTHO05D007718 5.4e-26 120.9 100 65.0
Ciclev10033154m.g Citrus clementina HOM05D006197 ORTHO05D007718 7.1e-26 120.6 104 61.5
MBI11_g07528_MAGBIO Magnolia biondii HOM05D006197 ORTHO05D007718 9.3e-26 120.2 103 59.2
SalBow1G7863 Salvia bowleyana HOM05D006197 ORTHO05D007718 9.3e-26 120.2 103 62.1
BcaC08g45013 Brassica carinata HOM05D006197 ORTHO05D007718 1.2e-25 119.8 102 66.7
BolC6t37808H Brassica oleracea HOM05D006197 ORTHO05D007718 1.2e-25 119.8 102 66.7
DCAR_008300 Daucus carota HOM05D006197 ORTHO05D007718 1.2e-25 119.8 102 61.8
Sabra01G0115400 Salix brachista HOM05D006197 ORTHO05D007718 1.6e-25 119.4 100 59.0
C06p26450 Brassica napus HOM05D006197 ORTHO05D007718 2.7e-25 118.6 102 65.7
Cc00_g26570 Coffea canephora HOM05D006197 ORTHO05D007718 3.5e-25 118.2 103 58.3
THA.LOC104819961 Tarenaya hassleriana HOM05D006197 ORTHO05D007718 4.6e-25 117.9 102 61.8
Thhalv10006335m.g Eutrema salsugineum HOM05D006197 ORTHO05D007718 6.0e-25 117.5 103 64.1
Sed0004723 Sechium edule HOM05D006197 ORTHO05D007718 6.0e-25 117.5 100 58.0
Aa31LG10G14080 Aethionema arabicum HOM05D006197 ORTHO05D007718 7.8e-25 117.1 102 60.8
CSS0031892 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 7.8e-25 117.1 108 61.1
CSS0033989 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 7.8e-25 117.1 108 61.1
CSS0037645 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 7.8e-25 117.1 108 61.1
Dinv25183 Davidia involucrata HOM05D002285 ORTHO05D009255 7.8e-25 117.1 104 58.7
Eucgr.E00313 Eucalyptus grandis HOM05D006197 ORTHO05D007718 7.8e-25 117.1 100 61.0
FAN13G1034 Fragaria x ananassa HOM05D006197 ORTHO05D007718 7.8e-25 117.1 97 64.9
BcaB02g07441 Brassica carinata HOM05D006197 ORTHO05D007718 1.0e-24 116.7 102 64.7
Gohir.A04G000300 Gossypium hirsutum HOM05D006197 ORTHO05D007718 1.0e-24 116.7 100 66.0
HanXRQChr08g0234831 Helianthus annuus HOM05D006197 ORTHO05D007718 1.0e-24 116.7 113 57.5
Duzib205G0278 Durio zibethinus HOM05D006197 ORTHO05D007718 1.3e-24 116.3 100 63.0
Gohir.D08G180000 Gossypium hirsutum HOM05D006197 ORTHO05D007718 1.7e-24 115.9 100 66.0
Gorai.004G188500 Gossypium raimondii HOM05D006197 ORTHO05D007718 1.7e-24 115.9 100 66.0
Sed0016057 Sechium edule HOM05D006197 ORTHO05D007718 1.7e-24 115.9 100 59.0
CsaV3_3G049530 Cucumis sativus L. HOM05D006197 ORTHO05D007718 3.0e-24 115.2 101 55.4
Duzib068G0126 Durio zibethinus HOM05D006197 ORTHO05D007718 3.0e-24 115.2 102 61.8
FAN08G0099 Fragaria x ananassa HOM05D006197 ORTHO05D007718 3.0e-24 115.2 100 62.0
PSO210G4997 Papaver somniferum HOM05D006197 ORTHO05D007718 3.0e-24 115.2 107 59.8
CANSAT64G2368 Cannabis sativa HOM05D006197 ORTHO05D007718 3.9e-24 114.8 108 59.3
Migut.N01790 Erythranthe guttata HOM05D006197 ORTHO05D007718 3.9e-24 114.8 105 60.0
Gohir.A08G159600 Gossypium hirsutum HOM05D006197 ORTHO05D007718 6.6e-24 114.0 100 65.0
Cc00_g31810 Coffea canephora HOM05D006197 ORTHO05D007718 8.7e-24 113.6 71 76.1
PSO832G1675 Papaver somniferum HOM05D006197 ORTHO05D007718 8.7e-24 113.6 107 58.9
AL5G41940 Arabidopsis lyrata HOM05D006197 ORTHO05D007718 1.1e-23 113.2 104 61.5
AT3G59840 Arabidopsis thaliana HOM05D006197 ORTHO05D007718 1.1e-23 113.2 104 61.5
BcaC07g40556 Brassica carinata HOM05D006197 ORTHO05D007718 1.1e-23 113.2 102 61.8
A09p52120 Brassica napus HOM05D006197 ORTHO05D007718 1.1e-23 113.2 102 61.8
Carub.0005s2656 Capsella rubella HOM05D006197 ORTHO05D007718 1.1e-23 113.2 104 61.5
MBI02_g29718_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D009071 1.1e-23 113.2 99 57.6
TPR.G6747 Trifolium pratense HOM05D006197 ORTHO05D007718 1.1e-23 113.2 62 82.3
BcaC07g40434 Brassica carinata HOM05D006197 ORTHO05D007718 1.9e-23 112.5 100 58.0
Thecc.03G234100 Theobroma cacao HOM05D006197 ORTHO05D007718 2.5e-23 112.1 100 61.0
Aqoxy1G03814 Aquilegia oxysepala HOM05D006197 ORTHO05D007718 3.3e-23 111.7 102 57.8
CARHR170180 Cardamine hirsuta HOM05D006197 ORTHO05D007718 3.3e-23 111.7 100 60.0
Nn1g03717 Nelumbo nucifera HOM05D006197 ORTHO05D007718 3.3e-23 111.7 97 59.8
MELO3C003373.2 Cucumis melo HOM05D006197 ORTHO05D007718 5.6e-23 110.9 101 55.4
Sp5g03300 Schrenkiella parvula HOM05D006197 ORTHO05D007718 5.6e-23 110.9 100 57.0
COL.COLO4_17110 Corchorus olitorius HOM05D006197 ORTHO05D007718 7.3e-23 110.5 100 60.0
QL12p007107 Quercus lobata HOM05D006197 ORTHO05D007718 7.3e-23 110.5 105 56.2
TWI15G0656 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 9.6e-23 110.2 102 59.8
TAR624G0346 Trochodendron aralioides HOM05D006197 ORTHO05D007718 1.6e-22 109.4 98 56.1
Gorai.008G229000 Gossypium raimondii HOM05D006197 ORTHO05D007718 2.1e-22 109.0 100 59.0
Actinidia03393 Actinidia chinensis HOM05D004955 ORTHO05D005965 4.8e-22 107.8 94 58.5
Cc08_g02050 Coffea canephora HOM05D006197 ORTHO05D007718 4.8e-22 107.8 67 77.6
Cc08_g01990 Coffea canephora HOM05D006197 ORTHO05D007718 1.1e-21 106.7 67 76.1
Gohir.D12G213400 Gossypium hirsutum HOM05D006197 ORTHO05D007718 1.4e-21 106.3 100 57.0
Sc01g0007760 Simmondsia chinensis HOM05D006197 ORTHO05D007718 1.8e-21 105.9 63 79.4
BolC8t51081H Brassica oleracea HOM05D000403 ORTHO05D004426 9.0e-21 103.6 64 76.6
ATR1088G052 Amborella trichopoda HOM05D006197 ORTHO05D007718 3.4e-20 101.7 108 50.9
Os05g0500450 Oryza sativa ssp. japonica HOM05D006197 ORTHO05D007718 1.3e-19 99.8 103 53.4
Duzib084G1370 Durio zibethinus HOM05D006197 ORTHO05D007718 2.7e-17 92.0 68 70.6
Cc08_g01910 Coffea canephora HOM05D006197 ORTHO05D007718 4.6e-17 91.3 56 75.0
Mapoly0127s0016 Marchantia polymorpha HOM05D006197 ORTHO05D007718 5.1e-16 87.8 75 54.7
AagrBONN_evm.TU.Sc2ySwM_368.296 Anthoceros agrestis HOM05D006197 ORTHO05D007718 1.6e-14 82.8 50 66.0
TPR.G6988 Trifolium pratense HOM05D006197 ORTHO05D007718 8.1e-14 80.5 65 61.5
CAN.G799.18 Capsicum annuum HOM05D006197 ORTHO05D007718 1.4e-13 79.7 55 69.1
Eucgr.C01972 Eucalyptus grandis HOM05D006197 ORTHO05D007718 1.4e-13 79.7 62 59.7
CBR_g8168 Chara braunii HOM05D006197 ORTHO05D007718 1.8e-13 79.3 113 40.7
Mapoly0046s0110 Marchantia polymorpha HOM05D006197 ORTHO05D007718 4.0e-13 78.2 79 46.8
Pp3c14_9970 Physcomitrium patens HOM05D006197 ORTHO05D007718 2.6e-12 75.5 98 45.9
SMO119G0374 Selaginella moellendorffii HOM05D006197 ORTHO05D007718 2.2e-11 72.4 112 42.0
Migut.E01523 Erythranthe guttata HOM05D006197 ORTHO05D007718 1.9e-10 69.3 132 34.8
Migut.E01526 Erythranthe guttata HOM05D006197 ORTHO05D007718 3.2e-10 68.6 67 52.2
Nn1g08520 Nelumbo nucifera HOM05D006197 ORTHO05D007718 7.1e-10 67.4 95 46.3
Cc08_g01940 Coffea canephora HOM05D000011 ORTHO05D000157 2.3e-08 62.4 32 81.2
Oeu059313.1 Olea europaea HOM05D005235 ORTHO05D006938 2.5e-07 58.9 95 36.8


User provided reference genes

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