Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0021077 Lotus japonicus HOM05D002318 ORTHO05D008744 6.8e-190 667.2 336 100.0
Phvul.002G069400 Phaseolus vulgaris HOM05D002318 ORTHO05D008744 6.7e-161 570.9 334 85.3
VMungo1215G2584 Vigna mungo HOM05D002318 ORTHO05D008744 4.5e-157 558.1 335 84.2
Glyma.02G113500 Glycine max HOM05D002318 ORTHO05D008744 7.6e-157 557.4 334 84.7
Ca_04907_v3 Cicer arietinum L. HOM05D002318 ORTHO05D008744 1.4e-155 553.1 329 83.9
TPR.G22412 Trifolium pratense HOM05D002318 ORTHO05D008744 4.2e-155 551.6 335 83.0
Psat2g128360 Pisum sativum HOM05D002318 ORTHO05D008744 1.0e-153 547.0 337 82.2
Lalb_Chr17g0340981 Lupinus albus HOM05D002318 ORTHO05D008744 2.4e-150 535.8 330 82.4
Medtr5g043480 Medicago truncatula HOM05D002318 ORTHO05D008744 1.4e-139 500.0 335 77.0
arahy.Tifrunner.gnm1.ann1.T0481B Arachis hypogaea HOM05D002318 ORTHO05D008744 2.3e-137 492.7 331 75.5
arahy.Tifrunner.gnm1.ann1.T5ZGHX Arachis hypogaea HOM05D002318 ORTHO05D008744 3.7e-135 485.3 325 75.7
QL03p070830 Quercus lobata HOM05D002318 ORTHO05D008744 6.5e-132 474.6 334 71.3
Haze_11934 Corylus avellana HOM05D002318 ORTHO05D008744 9.4e-131 470.7 334 70.4
Cfa008908 Carpinus fangiana HOM05D002318 ORTHO05D008744 1.8e-129 466.5 334 69.5
CiPaw.05G128000 Carya illinoinensis HOM05D002318 ORTHO05D008744 8.8e-129 464.2 334 70.4
TWI75G0802 Tripterygium wilfordii HOM05D002318 ORTHO05D008744 2.2e-127 459.5 337 68.5
RcHm_v2.0_Chr4g0438871 Rosa chinensis HOM05D002318 ORTHO05D008744 6.3e-127 458.0 329 69.3
Atru.chr11.1690 Acer truncatum HOM05D002318 ORTHO05D008744 3.1e-126 455.7 334 69.5
MELO3C011434.2 Cucumis melo HOM05D002318 ORTHO05D008744 4.1e-126 455.3 334 67.7
TAR622G0636 Trochodendron aralioides HOM05D002318 ORTHO05D004713 1.2e-125 453.8 331 69.2
Potri.010G161600 Populus trichocarpa HOM05D002318 ORTHO05D008744 4.5e-125 451.8 336 67.0
MD16G1064900 Malus domestica HOM05D002318 ORTHO05D008744 1.3e-124 450.3 333 67.6
Thecc.02G336500 Theobroma cacao HOM05D002318 ORTHO05D008744 2.2e-124 449.5 334 67.4
COL.COLO4_27936 Corchorus olitorius HOM05D002318 ORTHO05D008744 2.9e-124 449.1 336 67.3
GSVIVG01012177001 Vitis vinifera HOM05D002318 ORTHO05D008744 5.0e-124 448.4 335 66.0
FAN07G2980 Fragaria x ananassa HOM05D002318 ORTHO05D004713 6.5e-124 448.0 329 68.4
CsaV3_6G032440 Cucumis sativus L. HOM05D002318 ORTHO05D008744 8.5e-124 447.6 327 67.3
Sc11g0002270 Simmondsia chinensis HOM05D002318 ORTHO05D008744 7.2e-123 444.5 335 66.0
Sabra10G0122900 Salix brachista HOM05D002318 ORTHO05D008744 9.4e-123 444.1 336 66.7
FAN22G0051 Fragaria x ananassa HOM05D002318 ORTHO05D008744 2.7e-122 442.6 329 68.1
FAN17G2010 Fragaria x ananassa HOM05D002318 ORTHO05D008744 5.2e-121 438.3 340 66.2
PGR119G0925 Punica granatum HOM05D002318 ORTHO05D008744 5.2e-121 438.3 333 64.9
AUR62043182 Chenopodium quinoa HOM05D002318 ORTHO05D008744 3.3e-120 435.6 336 64.6
Ciclev10032054m.g Citrus clementina HOM05D002318 ORTHO05D008744 9.7e-120 434.1 334 68.0
ClCG08G010240 Citrullus lanatus HOM05D002318 ORTHO05D008744 2.4e-118 429.5 377 60.5
Duzib268G0798 Durio zibethinus HOM05D002318 ORTHO05D008744 2.4e-118 429.5 335 65.1
Gorai.013G091200 Gossypium raimondii HOM05D002318 ORTHO05D008744 2.0e-117 426.4 335 64.2
THA.LOC104805183 Tarenaya hassleriana HOM05D002318 ORTHO05D008744 3.5e-117 425.6 336 66.7
AT2G03390 Arabidopsis thaliana HOM05D002318 ORTHO05D008744 4.5e-117 425.2 341 64.8
Aqoxy3G03551 Aquilegia oxysepala HOM05D002318 ORTHO05D008744 1.0e-116 424.1 337 66.8
FAN12G0082 Fragaria x ananassa HOM05D002318 ORTHO05D008744 2.2e-116 422.9 329 66.0
Gohir.A13G079900 Gossypium hirsutum HOM05D002318 ORTHO05D008744 2.9e-116 422.5 335 63.9
Lsat_1_v5_gn_8_48101 Lactuca sativa HOM05D002318 ORTHO05D004713 6.5e-116 421.4 331 63.7
Eucgr.G02464 Eucalyptus grandis HOM05D002318 ORTHO05D008744 1.1e-115 420.6 330 65.2
AL5G13100 Arabidopsis lyrata HOM05D002318 ORTHO05D008744 3.2e-115 419.1 342 64.0
AL5G13140 Arabidopsis lyrata HOM05D002318 ORTHO05D008744 3.2e-115 419.1 342 64.0
Cpa.g.sc1.87 Carica papaya HOM05D002318 ORTHO05D008744 3.2e-115 419.1 335 65.4
MBI16_g06774_MAGBIO Magnolia biondii HOM05D002318 ORTHO05D008744 9.4e-115 417.5 334 65.6
CANSAT54G0184 Cannabis sativa HOM05D002318 ORTHO05D008744 1.2e-114 417.2 343 63.0
HanXRQChr12g0362851 Helianthus annuus HOM05D002318 ORTHO05D008744 1.2e-114 417.2 333 64.0
Oeu021096.1 Olea europaea HOM05D002318 ORTHO05D008744 8.0e-114 414.5 335 64.2
Thhalv10004578m.g Eutrema salsugineum HOM05D002318 ORTHO05D008744 1.8e-113 413.3 341 64.5
Carub.0005s0236 Capsella rubella HOM05D002318 ORTHO05D008744 3.0e-113 412.5 342 63.7
Hund05860 Selenicereus undatus HOM05D002318 ORTHO05D008744 3.0e-113 412.5 331 63.1
BcaC06g31184 Brassica carinata HOM05D002318 ORTHO05D008744 1.2e-112 410.6 342 62.6
Ah.13g073950 Amaranthus hybridus HOM05D002318 ORTHO05D008744 4.4e-112 408.7 357 58.5
BcaC06g34000 Brassica carinata HOM05D002318 ORTHO05D008744 4.4e-112 408.7 341 63.6
CARHR145730 Cardamine hirsuta HOM05D002318 ORTHO05D008744 4.4e-112 408.7 342 64.0
Sp2g14310 Schrenkiella parvula HOM05D002318 ORTHO05D008744 7.5e-112 407.9 343 63.8
Cc11_g12380 Coffea canephora HOM05D002318 ORTHO05D008744 9.8e-112 407.5 335 61.5
Aa31LG2G7170 Aethionema arabicum HOM05D002318 ORTHO05D008744 1.7e-111 406.8 345 63.5
ATR0111G011 Amborella trichopoda HOM05D002318 ORTHO05D008744 2.8e-111 406.0 329 66.6
Migut.L01223 Erythranthe guttata HOM05D002318 ORTHO05D008744 2.8e-111 406.0 335 62.7
Actinidia19922 Actinidia chinensis HOM05D002318 ORTHO05D008744 1.1e-110 404.1 333 61.0
Nitab4.5_0000334g0260 Nicotiana tabacum HOM05D002318 ORTHO05D008744 1.4e-110 403.7 334 61.7
Sopen05g007450 Solanum pennellii HOM05D002318 ORTHO05D008744 1.8e-110 403.3 335 61.2
PGSC0003DMG401028329 Solanum tuberosum HOM05D002318 ORTHO05D008744 4.1e-110 402.1 335 60.9
PGSC0003DMG402022110 Solanum tuberosum HOM05D002318 ORTHO05D008744 4.1e-110 402.1 335 60.9
C07p33850 Brassica napus HOM05D002318 ORTHO05D008744 9.1e-110 401.0 343 63.6
BolC7t43899H Brassica oleracea HOM05D002318 ORTHO05D008744 2.7e-109 399.4 343 63.3
EL10As3g23350 Beta vulgaris HOM05D002318 ORTHO05D008744 5.9e-109 398.3 366 56.6
BraA06t27203Z Brassica rapa HOM05D002318 ORTHO05D008744 5.9e-109 398.3 343 63.8
CSS0013540 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 7.7e-109 397.9 333 62.5
AUR62038089 Chenopodium quinoa HOM05D002318 ORTHO05D008744 3.6e-106 389.0 336 59.2
Gohir.D13G079700 Gossypium hirsutum HOM05D002318 ORTHO05D008744 1.0e-105 387.5 335 60.0
vmacro01330 Vaccinium macrocarpon HOM05D002318 ORTHO05D008744 1.4e-105 387.1 362 56.9
CAN.G1340.13 Capsicum annuum HOM05D002318 ORTHO05D008744 1.8e-105 386.7 337 59.6
Solyc05g012620.4 Solanum lycopersicum HOM05D002318 ORTHO05D008744 1.8e-105 386.7 269 68.8
DCAR_027449 Daucus carota HOM05D002318 ORTHO05D008744 1.2e-104 384.0 338 58.9
Rhsim12G0076700 Rhododendron simsii HOM05D002318 ORTHO05D008744 1.2e-104 384.0 339 59.6
Prupe.1G282000 Prunus persica HOM05D002318 ORTHO05D008744 3.4e-104 382.5 330 60.6
Peaxi162Scf00314g00023 Petunia axillaris HOM05D002318 ORTHO05D008744 9.8e-104 380.9 375 54.9
ECA233G4874 Erigeron canadensis HOM05D002318 ORTHO05D008744 1.2e-101 374.0 280 66.1
Manes.01G030400 Manihot esculenta HOM05D002318 ORTHO05D008744 1.6e-98 363.6 287 66.6
CDE04G0061 Ceratophyllum demersum HOM05D002318 ORTHO05D008744 6.1e-98 361.7 293 62.1
Hma1.2p1_0354F.1_g133650 Hydrangea macrophylla HOM05D002318 ORTHO05D008744 1.2e-96 357.5 287 62.0
Os08g0172200 Oryza sativa ssp. japonica HOM05D002318 ORTHO05D008744 1.3e-95 354.0 301 60.1
Nn3g17371 Nelumbo nucifera HOM05D002318 ORTHO05D008744 4.9e-95 352.1 288 63.9
SalBow2G2755 Salvia bowleyana HOM05D002318 ORTHO05D008744 8.3e-95 351.3 336 54.2
Dinv34114 Davidia involucrata HOM05D002318 ORTHO05D008744 5.4e-94 348.6 274 65.7
SEGI_16280 Sequoiadendron giganteum HOM05D002318 ORTHO05D008744 7.0e-94 348.2 281 62.6
FvH4_4g30500 Fragaria vesca HOM05D002318 ORTHO05D008744 1.6e-93 347.1 274 65.7
unitig_22.g6902 Utricularia gibba HOM05D002318 ORTHO05D008744 1.1e-91 340.9 284 63.0
Sed0004708 Sechium edule HOM05D002318 ORTHO05D008744 1.2e-90 337.4 274 63.5
Lj6C782T15 Lonicera japonica HOM05D002318 ORTHO05D008744 2.9e-87 326.2 341 53.1
A06p43150 Brassica napus HOM05D002318 ORTHO05D008744 2.1e-85 320.1 296 62.2
Mapoly0001s0530 Marchantia polymorpha HOM05D002318 ORTHO05D008744 3.9e-84 315.8 274 58.0
SGA_v2.0_scaffold16G07752 Striga asiatica HOM05D002318 ORTHO05D008744 6.6e-84 315.1 299 55.9
arahy.Tifrunner.gnm1.ann1.TF58FW Arachis hypogaea HOM05D002318 ORTHO05D008744 2.6e-80 303.1 224 73.2
Pp3c7_3960 Physcomitrium patens HOM05D002318 ORTHO05D008744 1.3e-79 300.8 246 58.1
arahy.Tifrunner.gnm1.ann1.1U2S5X Arachis hypogaea HOM05D002318 ORTHO05D008744 1.7e-79 300.4 224 72.8
Glyma.01G055000 Glycine max HOM05D002318 ORTHO05D008744 2.1e-77 293.5 198 81.8
AagrBONN_evm.TU.Sc2ySwM_117.1985 Anthoceros agrestis HOM05D002318 ORTHO05D008744 3.0e-76 289.7 257 56.4
PSO591G0040 Papaver somniferum HOM05D002318 ORTHO05D008744 9.9e-72 274.6 262 56.9
Dinv16705 Davidia involucrata HOM05D002318 ORTHO05D004713 2.2e-71 273.5 222 68.0
Actinidia31948 Actinidia chinensis HOM05D002318 ORTHO05D008744 2.1e-66 256.9 276 50.7
CBR_g27967 Chara braunii HOM05D002318 ORTHO05D008744 1.5e-64 250.8 252 50.8
SMO115G0105 Selaginella moellendorffii HOM05D002318 ORTHO05D008744 5.8e-64 248.8 216 56.5
FAN16G1553 Fragaria x ananassa HOM05D002318 ORTHO05D008744 1.6e-61 240.7 158 75.3
CSS0007300 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 4.0e-57 226.1 221 57.0
CSS0032009 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 4.5e-48 196.1 231 47.2
Zm00001eb370310 Zea mays HOM05D002318 ORTHO05D008744 1.8e-44 184.1 152 64.5
Aa31sc734G30 Aethionema arabicum HOM05D002318 ORTHO05D008744 3.7e-42 176.4 201 53.7
PRCOL_00000845 Prasinoderma coloniale HOM05D002318 ORTHO05D008744 3.2e-38 163.3 255 36.5
Cre02.g113700 Chlamydomonas reinhardtii HOM05D002318 ORTHO05D008744 7.9e-37 158.7 266 37.6
Glyma.01G054950 Glycine max HOM05D002318 ORTHO05D008744 3.1e-25 120.2 88 67.0
CBR_g50304 Chara braunii HOM05D020303 ORTHO05D021299 2.6e-19 100.5 157 38.2
Os01g0764500 Oryza sativa ssp. japonica HOM05D002318 ORTHO05D008744 1.1e-14 85.1 63 61.9
Lsat_1_v5_gn_5_151580 Lactuca sativa HOM05D002318 ORTHO05D008744 8.2e-10 68.9 56 62.5
arahy.Tifrunner.gnm1.ann1.QV9UMR Arachis hypogaea HOM05D000001 ORTHO05D000003 2.6e-08 63.9 152 32.9
Cfa025736 Carpinus fangiana HOM05D020303 ORTHO05D021299 1.1e-06 58.5 70 38.6


User provided reference genes

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