Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0020942 Lotus japonicus HOM05D002702 ORTHO05D003416 1.5e-79 299.7 179 100.0
Lj2g0010098 Lotus japonicus HOM05D002702 ORTHO05D003416 2.0e-26 123.2 108 66.7
Lj4g0005434 Lotus japonicus HOM05D002702 ORTHO05D003416 9.1e-24 114.4 105 63.8
Lalb_Chr02g0157411 Lupinus albus HOM05D002702 ORTHO05D003416 9.4e-13 77.8 116 44.8
Glyma.16G035400 Glycine max HOM05D002702 ORTHO05D003416 4.0e-11 72.4 107 39.3
Glyma.19G117700 Glycine max HOM05D002702 ORTHO05D003416 4.0e-11 72.4 107 39.3
arahy.Tifrunner.gnm1.ann1.LW5WEF Arachis hypogaea HOM05D002702 ORTHO05D003416 6.8e-11 71.6 111 45.9
Phvul.001G053501 Phaseolus vulgaris HOM05D002702 ORTHO05D003416 6.8e-11 71.6 121 36.4
Phvul.001G106433 Phaseolus vulgaris HOM05D002702 ORTHO05D003416 6.8e-11 71.6 121 36.4
arahy.Tifrunner.gnm1.ann1.9I2R1K Arachis hypogaea HOM05D002702 ORTHO05D003416 2.0e-10 70.1 121 38.0
Psat5g080560 Pisum sativum HOM05D002702 ORTHO05D003416 2.0e-10 70.1 57 57.9
Ca_04466_v3 Cicer arietinum L. HOM05D002702 ORTHO05D003416 5.7e-10 68.6 99 46.5
Lalb_Chr02g0157421 Lupinus albus HOM05D002702 ORTHO05D003416 6.3e-09 65.1 100 45.0
TPR.G9529 Trifolium pratense HOM05D002702 ORTHO05D003416 8.3e-09 64.7 137 31.4
TPR.G9547 Trifolium pratense HOM05D002702 ORTHO05D003416 8.3e-09 64.7 58 55.2
TPR.G34790 Trifolium pratense HOM05D002702 ORTHO05D003416 2.4e-08 63.2 101 40.6
Ca_08321_v3 Cicer arietinum L. HOM05D002702 ORTHO05D003416 5.4e-08 62.0 93 45.2
CsaV3_1G039340 Cucumis sativus L. HOM05D002702 ORTHO05D003416 9.1e-08 61.2 59 57.6
Glyma.01G125500 Glycine max HOM05D002702 ORTHO05D003416 1.2e-07 60.8 102 37.3
Psat3g086240 Pisum sativum HOM05D002702 ORTHO05D003416 1.2e-07 60.8 58 55.2
Thecc.05G241000 Theobroma cacao HOM05D002702 ORTHO05D003416 1.2e-07 60.8 59 52.5
Gohir.D11G170800 Gossypium hirsutum HOM05D002702 ORTHO05D003416 1.6e-07 60.5 59 52.5
Gorai.007G182800 Gossypium raimondii HOM05D002702 ORTHO05D003416 1.6e-07 60.5 59 52.5
MELO3C015360.2 Cucumis melo HOM05D002702 ORTHO05D003416 2.0e-07 60.1 59 55.9
Gohir.A13G160900 Gossypium hirsutum HOM05D002702 ORTHO05D003416 2.7e-07 59.7 59 52.5
Gohir.D13G166200 Gossypium hirsutum HOM05D002702 ORTHO05D003416 2.7e-07 59.7 59 52.5
Gorai.013G196300 Gossypium raimondii HOM05D002702 ORTHO05D003416 2.7e-07 59.7 59 52.5
Ciclev10019321m.g Citrus clementina HOM05D002702 ORTHO05D003416 3.5e-07 59.3 59 52.5
ClCG03G016660 Citrullus lanatus HOM05D002702 ORTHO05D003416 5.9e-07 58.5 59 55.9
Gohir.A11G164500 Gossypium hirsutum HOM05D002702 ORTHO05D003416 5.9e-07 58.5 59 50.8
Medtr6g027510 Medicago truncatula HOM05D002702 ORTHO05D003416 7.7e-07 58.2 58 50.0
AT3G09360 Arabidopsis thaliana HOM05D002702 ORTHO05D003416 1.0e-06 57.8 59 50.8
FvH4_4g11810 Fragaria vesca HOM05D002702 ORTHO05D003416 1.0e-06 57.8 59 54.2
FAN07G2025 Fragaria x ananassa HOM05D002702 ORTHO05D003416 1.0e-06 57.8 59 54.2
FAN12G2138 Fragaria x ananassa HOM05D002702 ORTHO05D003416 1.0e-06 57.8 59 54.2
FAN17G2691 Fragaria x ananassa HOM05D002702 ORTHO05D003416 1.0e-06 57.8 59 54.2
Duzib128G1433 Durio zibethinus HOM05D002702 ORTHO05D003416 1.3e-06 57.4 59 50.8
A03p35990 Brassica napus HOM05D002702 ORTHO05D003416 1.7e-06 57.0 59 52.5
RcHm_v2.0_Chr4g0409121 Rosa chinensis HOM05D002702 ORTHO05D003416 1.7e-06 57.0 59 54.2
C04p00530 Brassica napus HOM05D002702 ORTHO05D003416 2.3e-06 56.6 57 50.9
BcaC01g04231 Brassica carinata HOM05D002702 ORTHO05D003416 3.8e-06 55.8 59 50.8
Lj5g0018535 Lotus japonicus HOM05D002702 ORTHO05D236831 5.0e-06 55.5 51 54.9
Sp3g07740 Schrenkiella parvula HOM05D002702 ORTHO05D003416 5.0e-06 55.5 59 50.8
BcaC02g12571 Brassica carinata HOM05D002702 ORTHO05D003416 6.6e-06 55.1 57 49.1
BolC4t21688H Brassica oleracea HOM05D002702 ORTHO05D003416 6.6e-06 55.1 57 49.1
MD04G1033900 Malus domestica HOM05D002702 ORTHO05D003416 6.6e-06 55.1 59 50.8


User provided reference genes

Program Settings