Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0020728 Lotus japonicus HOM05D009308 ORTHO05D011513 8.1e-88 327.0 162 100.0
Lj2g0007961 Lotus japonicus HOM05D009308 ORTHO05D011513 4.6e-83 311.2 162 95.1
Lj2g0018634 Lotus japonicus HOM05D009308 ORTHO05D011513 7.9e-67 257.3 162 81.5
TPR.G21624 Trifolium pratense HOM05D009308 ORTHO05D011513 2.8e-40 169.1 165 53.9
Ca_04389_v3 Cicer arietinum L. HOM05D009308 ORTHO05D011513 8.2e-40 167.5 150 59.3
Psat1g081520 Pisum sativum HOM05D009308 ORTHO05D011513 3.1e-39 165.6 164 57.9
Psat1g081560 Pisum sativum HOM05D009308 ORTHO05D011513 3.1e-39 165.6 164 58.5
Phvul.005G045200 Phaseolus vulgaris HOM05D009308 ORTHO05D011513 4.2e-36 155.2 153 55.6
Psat1g082680 Pisum sativum HOM05D009308 ORTHO05D011513 1.4e-34 150.2 147 53.7
Medtr6g021830 Medicago truncatula HOM05D009308 ORTHO05D011513 2.3e-34 149.4 159 52.2
Medtr6g021850 Medicago truncatula HOM05D009308 ORTHO05D011513 3.0e-34 149.1 159 52.2
VMungo1080G0761 Vigna mungo HOM05D009308 ORTHO05D011513 3.9e-34 148.7 154 53.2
Psat1g081480 Pisum sativum HOM05D009308 ORTHO05D011513 2.6e-33 146.0 159 50.9
TPR.G21629 Trifolium pratense HOM05D009308 ORTHO05D011513 4.4e-33 145.2 167 51.5
VMungo0464G2138 Vigna mungo HOM05D009308 ORTHO05D011513 4.4e-33 145.2 158 54.4
Glyma.15G265800 Glycine max HOM05D009308 ORTHO05D011513 1.3e-32 143.7 147 57.8
Phvul.004G059800 Phaseolus vulgaris HOM05D009308 ORTHO05D011513 2.2e-32 142.9 162 52.5
Glyma.19G052500 Glycine max HOM05D009308 ORTHO05D011513 4.8e-32 141.7 152 55.3
Glyma.05G114800 Glycine max HOM05D009308 ORTHO05D011513 1.1e-31 140.6 154 52.6
Medtr6g021870 Medicago truncatula HOM05D009308 ORTHO05D011513 7.0e-31 137.9 146 55.5
Medtr6g021860 Medicago truncatula HOM05D009308 ORTHO05D011513 9.1e-31 137.5 145 55.2
Phvul.004G059900 Phaseolus vulgaris HOM05D009308 ORTHO05D011513 1.6e-30 136.7 158 52.5
Glyma.19G052600 Glycine max HOM05D009308 ORTHO05D011513 1.0e-29 134.0 159 49.7
Glyma.19G052900 Glycine max HOM05D009308 ORTHO05D011513 3.8e-29 132.1 162 51.2
Glyma.19G052700 Glycine max HOM05D009308 ORTHO05D011513 8.5e-29 131.0 158 49.4
TPR.G21621 Trifolium pratense HOM05D009308 ORTHO05D011513 2.5e-28 129.4 166 48.2
VMungo0464G0985 Vigna mungo HOM05D009308 ORTHO05D011513 2.5e-28 129.4 161 47.8
Medtr6g021900 Medicago truncatula HOM05D009308 ORTHO05D011513 3.2e-28 129.0 159 50.9
Glyma.08G161800 Glycine max HOM05D009308 ORTHO05D011513 6.5e-21 104.8 159 46.5
Psat0s5065g0040 Pisum sativum HOM05D009308 ORTHO05D011513 5.5e-20 101.7 126 45.2
TPR.G320 Trifolium pratense HOM05D009308 ORTHO05D011513 2.3e-18 96.3 111 52.3
Prupe.2G217100 Prunus persica HOM05D010935 ORTHO05D010383 2.5e-12 76.3 167 36.5
Phvul.004G074900 Phaseolus vulgaris HOM05D009308 ORTHO05D011513 1.5e-09 67.0 161 34.2
Duzib128G1476 Durio zibethinus HOM05D010162 ORTHO05D010383 3.4e-09 65.9 183 33.3
MD07G1177700 Malus domestica HOM05D010935 ORTHO05D010383 3.4e-09 65.9 158 32.9
Manes.10G044100 Manihot esculenta HOM05D010162 ORTHO05D010383 7.5e-09 64.7 153 30.7
Thecc.10G069600 Theobroma cacao HOM05D010162 ORTHO05D010383 7.5e-09 64.7 183 32.2
MD01G1111500 Malus domestica HOM05D010935 ORTHO05D010383 2.2e-08 63.2 163 31.3
Eucgr.G02810 Eucalyptus grandis HOM05D010935 ORTHO05D010383 1.1e-07 60.8 169 30.2
Manes.10G043900 Manihot esculenta HOM05D010162 ORTHO05D010383 1.8e-07 60.1 163 31.9
TAR383G0645 Trochodendron aralioides HOM05D003020 ORTHO05D003226 1.2e-06 57.4 128 32.0
TAR383G0288 Trochodendron aralioides HOM05D003020 ORTHO05D003226 1.6e-06 57.0 170 30.6
Manes.10G043800 Manihot esculenta HOM05D010162 ORTHO05D010383 3.5e-06 55.8 168 28.6
TAR626G1849 Trochodendron aralioides HOM05D003020 ORTHO05D003226 4.5e-06 55.5 196 26.5
Manes.10G044000 Manihot esculenta HOM05D010162 ORTHO05D010383 7.7e-06 54.7 155 28.4


User provided reference genes

Program Settings