Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0020590 Lotus japonicus HOM05D006947 ORTHO05D008818 4.1e-312 1074.3 593 100.0
Glyma.09G120400 Glycine max HOM05D006947 ORTHO05D008818 1.2e-245 853.2 591 77.2
Lalb_Chr10g0096001 Lupinus albus HOM05D006947 ORTHO05D008818 4.5e-237 824.7 591 76.5
VMungo1215G1110 Vigna mungo HOM05D006947 ORTHO05D008818 1.1e-227 793.5 592 73.0
Ca_12591_v3 Cicer arietinum L. HOM05D006947 ORTHO05D008818 7.0e-222 774.2 597 71.7
Phvul.003G022200 Phaseolus vulgaris HOM05D006947 ORTHO05D008818 4.5e-221 771.5 592 72.1
arahy.Tifrunner.gnm1.ann1.573L1D Arachis hypogaea HOM05D006947 ORTHO05D008818 7.8e-221 770.8 590 71.0
arahy.Tifrunner.gnm1.ann1.8B134P Arachis hypogaea HOM05D006947 ORTHO05D008818 5.7e-216 754.6 582 70.4
TPR.G36974 Trifolium pratense HOM05D006947 ORTHO05D008818 2.7e-213 745.7 594 69.0
Cfa014981 Carpinus fangiana HOM05D006947 ORTHO05D008818 1.7e-196 689.9 596 62.8
Haze_10941 Corylus avellana HOM05D006947 ORTHO05D008818 3.0e-196 689.1 626 61.2
Medtr1g031750 Medicago truncatula HOM05D006947 ORTHO05D008818 8.6e-196 687.6 594 65.5
CiPaw.06G048400 Carya illinoinensis HOM05D006947 ORTHO05D008818 6.8e-193 677.9 593 63.1
GSVIVG01011706001 Vitis vinifera HOM05D006947 ORTHO05D008818 3.0e-188 662.5 599 60.9
RcHm_v2.0_Chr4g0443581 Rosa chinensis HOM05D006947 ORTHO05D008818 1.9e-187 659.8 595 60.8
Dinv28045 Davidia involucrata HOM05D006947 ORTHO05D008818 2.8e-186 656.0 598 61.0
COL.COLO4_13100 Corchorus olitorius HOM05D006947 ORTHO05D008818 3.6e-186 655.6 591 60.2
Ciclev10014242m.g Citrus clementina HOM05D006947 ORTHO05D008818 4.7e-186 655.2 594 60.3
TWI74G1199 Tripterygium wilfordii HOM05D006947 ORTHO05D008818 1.1e-185 654.1 596 60.4
TAR622G0063 Trochodendron aralioides HOM05D006947 ORTHO05D008818 6.9e-185 651.4 595 60.8
Manes.17G080500 Manihot esculenta HOM05D006947 ORTHO05D008818 4.4e-184 648.7 599 59.3
Gorai.002G176700 Gossypium raimondii HOM05D006947 ORTHO05D008818 5.8e-184 648.3 591 59.4
FvH4_4g34070 Fragaria vesca HOM05D006947 ORTHO05D008818 1.7e-183 646.7 595 59.7
Gohir.D01G143300 Gossypium hirsutum HOM05D006947 ORTHO05D008818 1.7e-183 646.7 591 59.2
Duzib251G0407 Durio zibethinus HOM05D006947 ORTHO05D008818 2.9e-183 646.0 591 60.6
ClCG01G006350 Citrullus lanatus HOM05D006947 ORTHO05D008818 4.9e-183 645.2 594 59.8
FAN12G3265 Fragaria x ananassa HOM05D006947 ORTHO05D008818 4.9e-183 645.2 595 59.5
FAN07G0937 Fragaria x ananassa HOM05D006947 ORTHO05D008818 1.1e-182 644.0 606 58.7
Eucgr.B02936 Eucalyptus grandis HOM05D006947 ORTHO05D008818 1.2e-181 640.6 594 58.9
Potri.008G131900 Populus trichocarpa HOM05D006947 ORTHO05D008818 4.6e-181 638.6 599 58.6
MD16G1022800 Malus domestica HOM05D006947 ORTHO05D008818 7.8e-181 637.9 596 59.9
Potri.010G110200 Populus trichocarpa HOM05D006947 ORTHO05D008818 2.3e-180 636.3 600 59.0
Atru.chr11.650 Acer truncatum HOM05D006947 ORTHO05D008818 3.0e-180 636.0 581 59.9
CSS0036590 Camellia sinensis var. sinensis HOM05D006947 ORTHO05D008818 3.6e-178 629.0 598 59.4
MELO3C005295.2 Cucumis melo HOM05D006947 ORTHO05D008818 1.4e-177 627.1 594 59.1
Peaxi162Scf00376g00128 Petunia axillaris HOM05D006947 ORTHO05D008818 9.0e-177 624.4 601 58.4
Hma1.2p1_0330F.1_g127400 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 7.6e-176 621.3 601 57.4
Sed0026926 Sechium edule HOM05D006947 ORTHO05D008818 9.9e-176 620.9 594 57.7
DCAR_026786 Daucus carota HOM05D006947 ORTHO05D008818 3.8e-175 619.0 595 57.8
QL03p033900 Quercus lobata HOM05D006947 ORTHO05D008818 1.4e-174 617.1 596 57.9
Sabra10G0080600 Salix brachista HOM05D006947 ORTHO05D008818 2.4e-174 616.3 600 57.5
Nitab4.5_0000282g0010 Nicotiana tabacum HOM05D006947 ORTHO05D008818 6.0e-173 611.7 599 57.3
CsaV3_5G028330 Cucumis sativus L. HOM05D006947 ORTHO05D008818 3.3e-171 605.9 595 58.0
HanXRQChr12g0363561 Helianthus annuus HOM05D006947 ORTHO05D008818 1.7e-167 593.6 599 56.8
CANSAT01G1138 Cannabis sativa HOM05D006947 ORTHO05D008818 3.8e-167 592.4 558 59.5
Cc11_g08260 Coffea canephora HOM05D006947 ORTHO05D008818 8.4e-167 591.3 598 54.5
Solyc05g026560.3 Solanum lycopersicum HOM05D006947 ORTHO05D008818 7.1e-166 588.2 597 54.4
Sopen05g023090 Solanum pennellii HOM05D006947 ORTHO05D008818 1.6e-165 587.0 597 54.4
Lj6A742T64 Lonicera japonica HOM05D006947 ORTHO05D008818 5.1e-164 582.0 629 53.4
THA.LOC104822169 Tarenaya hassleriana HOM05D006947 ORTHO05D008818 7.4e-163 578.2 592 55.2
Gohir.1Z015600 Gossypium hirsutum HOM05D006947 ORTHO05D008818 1.2e-160 570.9 591 55.5
MSTRG.907 Avicennia marina HOM05D006947 ORTHO05D008818 2.6e-160 569.7 599 54.6
PGR102G1367 Punica granatum HOM05D006947 ORTHO05D008818 4.5e-160 568.9 595 53.8
Sc14g0006260 Simmondsia chinensis HOM05D006947 ORTHO05D008818 7.6e-160 568.2 592 54.2
ECA233G0254 Erigeron canadensis HOM05D006947 ORTHO05D008818 1.0e-159 567.8 595 54.6
EL10Ac6g14173 Beta vulgaris HOM05D006947 ORTHO05D008818 2.2e-159 566.6 591 53.5
AUR62014176 Chenopodium quinoa HOM05D006947 ORTHO05D008818 3.8e-159 565.8 590 53.6
Sc14g0007020 Simmondsia chinensis HOM05D006947 ORTHO05D008818 8.4e-159 564.7 592 54.1
AUR62039529 Chenopodium quinoa HOM05D006947 ORTHO05D008818 7.9e-157 558.1 590 52.2
Thhalv10006791m.g Eutrema salsugineum HOM05D006947 ORTHO05D008818 1.0e-156 557.8 596 53.2
BolC8t49817H Brassica oleracea HOM05D006947 ORTHO05D008818 5.1e-156 555.4 599 52.3
BcaC07g39188 Brassica carinata HOM05D006947 ORTHO05D008818 6.7e-156 555.1 599 52.3
Ah.03g137350 Amaranthus hybridus HOM05D006947 ORTHO05D008818 1.9e-155 553.5 590 53.4
SalBow8G5231 Salvia bowleyana HOM05D006947 ORTHO05D008818 2.5e-155 553.1 589 54.3
BcaB03g11927 Brassica carinata HOM05D006947 ORTHO05D008818 4.3e-155 552.4 596 53.4
Sp1g20640 Schrenkiella parvula HOM05D006947 ORTHO05D008818 4.3e-155 552.4 595 53.8
C08p21780 Brassica napus HOM05D006947 ORTHO05D008818 1.3e-154 550.8 599 51.9
BraA08t34762Z Brassica rapa HOM05D006947 ORTHO05D008818 1.3e-154 550.8 600 52.7
CARHR023620 Cardamine hirsuta HOM05D006947 ORTHO05D008818 2.4e-153 546.6 595 53.1
A08p28310 Brassica napus HOM05D006947 ORTHO05D008818 5.3e-153 545.4 601 52.2
AL1G36850 Arabidopsis lyrata HOM05D006947 ORTHO05D008818 9.0e-153 544.7 595 53.1
Carub.0001s2275 Capsella rubella HOM05D006947 ORTHO05D008818 2.0e-152 543.5 595 52.3
AT1G23180 Arabidopsis thaliana HOM05D006947 ORTHO05D008818 1.0e-151 541.2 595 52.6
ATR0317G087 Amborella trichopoda HOM05D006947 ORTHO05D008818 8.8e-148 528.1 594 51.0
Migut.L00588 Erythranthe guttata HOM05D006947 ORTHO05D008818 1.5e-147 527.3 605 51.9
Actinidia36648 Actinidia chinensis HOM05D006947 ORTHO05D008818 7.4e-147 525.0 611 53.4
Hund24964 Selenicereus undatus HOM05D006947 ORTHO05D008818 9.7e-147 524.6 641 48.5
Aqoxy3G04093 Aquilegia oxysepala HOM05D006947 ORTHO05D008818 3.7e-146 522.7 594 52.2
Aa31LG7G7190 Aethionema arabicum HOM05D006947 ORTHO05D008818 5.3e-145 518.8 604 51.0
Migut.O00818 Erythranthe guttata HOM05D006947 ORTHO05D008818 3.2e-142 509.6 588 51.4
Lsat_1_v5_gn_8_44260 Lactuca sativa HOM05D006947 ORTHO05D008818 7.2e-142 508.4 608 49.7
Gohir.A01G150136 Gossypium hirsutum HOM05D006947 ORTHO05D008818 6.1e-141 505.4 591 51.6
Rhsim09G0093800 Rhododendron simsii HOM05D006947 ORTHO05D008818 2.3e-140 503.4 634 49.7
CDE11G0632 Ceratophyllum demersum HOM05D006947 ORTHO05D008818 6.3e-138 495.4 595 48.4
MBI15_g36991_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 2.4e-137 493.4 516 53.5
Cpa.g.sc2.239 Carica papaya HOM05D006947 ORTHO05D008818 1.7e-135 487.3 636 46.9
HPP92_024592 Vanilla planifolia HOM05D006947 ORTHO05D008818 2.7e-133 479.9 596 48.8
HPP92_024520 Vanilla planifolia HOM05D006947 ORTHO05D008818 2.3e-132 476.9 597 48.6
Thecc.02G287500 Theobroma cacao HOM05D006947 ORTHO05D008818 4.5e-128 462.6 426 59.9
Os01g0524700 Oryza sativa ssp. japonica HOM05D006947 ORTHO05D008818 3.2e-126 456.4 600 45.8
Psat6g044440 Pisum sativum HOM05D006947 ORTHO05D008818 8.8e-124 448.4 383 67.1
Glyma.07G166300 Glycine max HOM05D006947 ORTHO05D008818 4.8e-122 442.6 270 82.2
unitig_52.g17412 Utricularia gibba HOM05D006947 ORTHO05D008818 1.8e-121 440.7 534 48.9
vmacro10663 Vaccinium macrocarpon HOM05D006947 ORTHO05D008818 1.2e-104 384.8 581 44.8
Prupe.1G330100 Prunus persica HOM05D006947 ORTHO05D008818 1.4e-100 371.3 270 70.4
MBI15_g41220_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 4.4e-99 366.3 515 44.9
Hma1.2p1_0330F.1_g127410 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 9.5e-94 348.6 270 66.3
Nitab4.5_0000018g0180 Nicotiana tabacum HOM05D006947 ORTHO05D008818 4.7e-85 319.7 270 63.3
PSO063G5930 Papaver somniferum HOM05D006947 ORTHO05D008818 3.5e-80 303.5 271 60.9
PSO782G4825 Papaver somniferum HOM05D006947 ORTHO05D008818 1.7e-79 301.2 271 60.1
Hma1.2p1_0330F.1_g127420 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 2.8e-77 293.9 289 57.4
Pp3c18_19500 Physcomitrium patens HOM05D006947 ORTHO05D008818 6.4e-74 282.7 604 33.9
Oeu023430.2 Olea europaea HOM05D006947 ORTHO05D008818 4.3e-70 270.0 278 54.7
Mapoly0112s0009 Marchantia polymorpha HOM05D006947 ORTHO05D008818 3.8e-66 256.9 600 32.0
PGSC0003DMG400015903 Solanum tuberosum HOM05D006947 ORTHO05D008818 8.1e-61 239.2 205 62.9
Nitab4.5_0000532g0050 Nicotiana tabacum HOM05D006947 ORTHO05D008818 2.6e-59 234.2 211 58.3
Nn4g24252 Nelumbo nucifera HOM05D006947 ORTHO05D008818 4.3e-46 190.3 325 42.5
MD13G1021800 Malus domestica HOM05D006947 ORTHO05D008818 5.7e-38 163.3 125 67.2
AagrBONN_evm.TU.Sc2ySwM_117.3643 Anthoceros agrestis HOM05D006947 ORTHO05D008818 1.6e-37 161.8 201 45.8
Psat1g011800 Pisum sativum HOM05D006947 ORTHO05D008818 1.7e-26 125.2 145 50.3
Psat6g175840 Pisum sativum HOM05D006947 ORTHO05D005363 1.2e-24 119.0 109 63.3
Psat4g128000 Pisum sativum HOM05D002621 ORTHO05D004807 7.4e-22 109.8 99 64.6
GSVIVG01031683001 Vitis vinifera HOM05D006947 ORTHO05D005406 2.9e-18 97.8 155 39.4
CBR_g50426 Chara braunii HOM05D006947 ORTHO05D008818 3.2e-17 94.4 259 28.6
Psat6g091080 Pisum sativum HOM05D004333 ORTHO05D005363 2.7e-16 91.3 125 44.0
Oeu059516.1 Olea europaea HOM05D001630 ORTHO05D002505 7.0e-12 76.6 68 54.4
Nitab4.5_0000532g0040 Nicotiana tabacum HOM05D006947 ORTHO05D008818 1.4e-07 62.4 40 80.0
Psat5g059800 Pisum sativum HOM05D000380 ORTHO05D320631 2.6e-06 58.2 31 80.6
Psat5g059840 Pisum sativum HOM05D000434 ORTHO05D007220 3.4e-06 57.8 31 80.6


User provided reference genes

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