Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0020265 Lotus japonicus HOM05D006981 ORTHO05D008719 3.3e-74 281.6 138 100.0
Glyma.16G194500 Glycine max HOM05D006981 ORTHO05D008719 1.5e-63 246.1 138 81.9
Glyma.09G140600 Glycine max HOM05D006981 ORTHO05D008719 1.0e-62 243.4 138 81.9
Phvul.004G118000 Phaseolus vulgaris HOM05D006981 ORTHO05D008719 2.2e-62 242.3 138 83.3
Medtr6g471020 Medicago truncatula HOM05D006981 ORTHO05D008719 2.6e-58 228.8 138 79.0
Ca_25351_v3 Cicer arietinum L. HOM05D000367 ORTHO05D001438 4.8e-57 224.6 138 76.8
arahy.Tifrunner.gnm1.ann1.8WRD93 Arachis hypogaea HOM05D006981 ORTHO05D008719 2.6e-55 218.8 146 76.7
arahy.Tifrunner.gnm1.ann1.T9EWQW Arachis hypogaea HOM05D006981 ORTHO05D008719 2.6e-55 218.8 145 76.6
VMungo0464G1391 Vigna mungo HOM05D006981 ORTHO05D008719 7.2e-53 210.7 113 85.8
CiPaw.03G105000 Carya illinoinensis HOM05D006981 ORTHO05D008719 1.1e-45 186.8 145 65.5
QL09p014567 Quercus lobata HOM05D006981 ORTHO05D008719 3.2e-45 185.3 142 63.4
Lalb_Chr19g0130931 Lupinus albus HOM05D006981 ORTHO05D008719 4.2e-45 184.9 114 77.2
Haze_13729 Corylus avellana HOM05D006981 ORTHO05D008719 6.1e-44 181.0 120 71.7
Cfa008306 Carpinus fangiana HOM05D006981 ORTHO05D008719 5.2e-43 177.9 120 70.8
TWI14G0356 Tripterygium wilfordii HOM05D006981 ORTHO05D008719 6.8e-43 177.6 117 72.6
vmacro06697 Vaccinium macrocarpon HOM05D006981 ORTHO05D008719 6.8e-43 177.6 126 65.1
PGR142G3060 Punica granatum HOM05D006981 ORTHO05D008719 2.0e-42 176.0 130 65.4
Eucgr.K00242 Eucalyptus grandis HOM05D006981 ORTHO05D008719 2.6e-42 175.6 144 63.2
GSVIVG01010548001 Vitis vinifera HOM05D006981 ORTHO05D008719 3.4e-42 175.3 127 65.4
CsaV3_5G005720 Cucumis sativus L. HOM05D006981 ORTHO05D008719 5.7e-42 174.5 127 63.8
ClCG01G005500 Citrullus lanatus HOM05D003170 ORTHO05D008719 1.3e-41 173.3 142 60.6
FAN10G3446 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.3e-41 173.3 125 64.8
CAN.G28.6 Capsicum annuum HOM05D006981 ORTHO05D008719 1.7e-41 172.9 139 59.7
Sc19g0001580 Simmondsia chinensis HOM05D006981 ORTHO05D008719 1.7e-41 172.9 125 64.8
PGSC0003DMG400015647 Solanum tuberosum HOM05D006981 ORTHO05D008719 1.7e-41 172.9 132 61.4
Hma1.2p1_0270F.1_g108180 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 2.2e-41 172.6 118 67.8
Nitab4.5_0000080g0060 Nicotiana tabacum HOM05D006981 ORTHO05D008719 2.2e-41 172.6 139 61.2
FAN03G1713 Fragaria x ananassa HOM05D006981 ORTHO05D008719 4.8e-41 171.4 123 65.0
FAN03G1998 Fragaria x ananassa HOM05D006981 ORTHO05D008719 4.8e-41 171.4 123 65.0
Hund11756 Selenicereus undatus HOM05D006981 ORTHO05D008719 6.3e-41 171.0 116 69.0
HanXRQChr08g0209251 Helianthus annuus HOM05D006981 ORTHO05D008719 1.4e-40 169.9 131 61.1
AUR62021209 Chenopodium quinoa HOM05D006981 ORTHO05D008719 1.8e-40 169.5 117 69.2
Sed0011448 Sechium edule HOM05D006981 ORTHO05D008719 1.8e-40 169.5 127 61.4
MSTRG.27124 Avicennia marina HOM05D006981 ORTHO05D008719 2.4e-40 169.1 129 62.8
AUR62016001 Chenopodium quinoa HOM05D006981 ORTHO05D008719 2.4e-40 169.1 117 67.5
Gohir.D08G111300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 2.4e-40 169.1 124 65.3
Gorai.004G119200 Gossypium raimondii HOM05D006981 ORTHO05D008719 2.4e-40 169.1 124 65.3
Thecc.03G174800 Theobroma cacao HOM05D006981 ORTHO05D008719 2.4e-40 169.1 127 63.0
MD07G1267100 Malus domestica HOM05D006981 ORTHO05D008719 3.1e-40 168.7 131 64.1
Sopen06g017220 Solanum pennellii HOM05D006981 ORTHO05D008719 3.1e-40 168.7 125 63.2
COL.COLO4_14290 Corchorus olitorius HOM05D006981 ORTHO05D008719 4.1e-40 168.3 128 63.3
ECA233G5478 Erigeron canadensis HOM05D006981 ORTHO05D008719 4.1e-40 168.3 145 56.6
FvH4_7g29270 Fragaria vesca HOM05D006981 ORTHO05D008719 4.1e-40 168.3 123 64.2
Nn4g26525 Nelumbo nucifera HOM05D006981 ORTHO05D008719 4.1e-40 168.3 130 62.3
Duzib084G0697 Durio zibethinus HOM05D006981 ORTHO05D008719 5.4e-40 167.9 143 58.7
Actinidia32871 Actinidia chinensis HOM05D006981 ORTHO05D008719 7.0e-40 167.5 150 56.0
CANSAT21G0349 Cannabis sativa HOM05D006981 ORTHO05D008719 9.1e-40 167.2 123 65.9
MELO3C005381.2 Cucumis melo HOM05D006981 ORTHO05D008719 9.1e-40 167.2 127 60.6
CSS0044451 Camellia sinensis var. sinensis HOM05D006981 ORTHO05D008719 1.2e-39 166.8 121 66.1
Ciclev10006231m.g Citrus clementina HOM05D006981 ORTHO05D008719 2.0e-39 166.0 121 68.6
FAN06G1994 Fragaria x ananassa HOM05D006981 ORTHO05D008719 2.0e-39 166.0 122 65.6
Manes.06G146000 Manihot esculenta HOM05D006981 ORTHO05D008719 2.0e-39 166.0 123 65.0
FAN01G2034 Fragaria x ananassa HOM05D006981 ORTHO05D008719 2.7e-39 165.6 114 67.5
Duzib205G0859 Durio zibethinus HOM05D006981 ORTHO05D008719 5.9e-39 164.5 128 61.7
Migut.F00354 Erythranthe guttata HOM05D006981 ORTHO05D008719 5.9e-39 164.5 136 58.8
Lsat_1_v5_gn_8_8340 Lactuca sativa HOM05D006981 ORTHO05D008719 7.7e-39 164.1 135 57.8
unitig_747.g21767 Utricularia gibba HOM05D006981 ORTHO05D008719 7.7e-39 164.1 129 58.1
Lj1C995G12 Lonicera japonica HOM05D006981 ORTHO05D008719 1.0e-38 163.7 138 60.9
SGA_v2.0_scaffold2G01066 Striga asiatica HOM05D006981 ORTHO05D008719 1.0e-38 163.7 133 60.2
Cc02_g03150 Coffea canephora HOM05D006981 ORTHO05D008719 1.3e-38 163.3 141 56.7
Gohir.A08G100300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 1.3e-38 163.3 130 61.5
DCAR_009354 Daucus carota HOM05D006981 ORTHO05D008719 1.7e-38 162.9 120 62.5
Nitab4.5_0019580g0020 Nicotiana tabacum HOM05D006981 ORTHO05D008719 1.7e-38 162.9 118 65.3
RcHm_v2.0_Chr1g0377021 Rosa chinensis HOM05D006981 ORTHO05D008719 1.7e-38 162.9 114 67.5
Aqoxy7G00390 Aquilegia oxysepala HOM05D006981 ORTHO05D008719 5.0e-38 161.4 127 60.6
Solyc06g051300.3 Solanum lycopersicum HOM05D006981 ORTHO05D008719 8.5e-38 160.6 140 57.1
Ah.13g068510 Amaranthus hybridus HOM05D006981 ORTHO05D008719 1.9e-37 159.5 120 63.3
Atru.chr1.479 Acer truncatum HOM05D006981 ORTHO05D008719 2.5e-37 159.1 120 67.5
MBI17_g21049_MAGBIO Magnolia biondii HOM05D006981 ORTHO05D008719 4.2e-37 158.3 126 57.9
Cpa.g.sc107.36 Carica papaya HOM05D006981 ORTHO05D008719 1.2e-36 156.8 118 63.6
Prupe.2G292700 Prunus persica HOM05D006981 ORTHO05D008719 1.6e-36 156.4 119 62.2
EL10Ac3g05672 Beta vulgaris HOM05D006981 ORTHO05D008719 2.7e-36 155.6 118 63.6
FAN06G2660 Fragaria x ananassa HOM05D006981 ORTHO05D008719 2.7e-36 155.6 122 63.1
TAR375G0811 Trochodendron aralioides HOM05D006981 ORTHO05D008719 1.0e-35 153.7 118 65.3
Manes.09G002400 Manihot esculenta HOM05D006981 ORTHO05D008719 1.8e-35 152.9 128 60.9
Oeu056238.2 Olea europaea HOM05D006981 ORTHO05D008719 2.3e-35 152.5 120 61.7
PSO782G4575 Papaver somniferum HOM05D006981 ORTHO05D008719 2.3e-35 152.5 139 51.1
CDE08G1025 Ceratophyllum demersum HOM05D006981 ORTHO05D008719 6.8e-35 151.0 117 58.1
Aa31LG3G8600 Aethionema arabicum HOM05D006981 ORTHO05D008719 8.8e-35 150.6 114 63.2
Carub.0008s1231 Capsella rubella HOM05D006981 ORTHO05D008719 8.8e-35 150.6 114 66.7
AL8G26600 Arabidopsis lyrata HOM05D006981 ORTHO05D008719 1.5e-34 149.8 114 67.5
A10p09920 Brassica napus HOM05D006981 ORTHO05D008719 1.5e-34 149.8 115 67.0
SalBow4G2131 Salvia bowleyana HOM05D006981 ORTHO05D008719 1.5e-34 149.8 115 62.6
Sp6g14470 Schrenkiella parvula HOM05D006981 ORTHO05D008719 1.5e-34 149.8 115 66.1
HPP92_028124 Vanilla planifolia HOM05D006981 ORTHO05D008719 1.5e-34 149.8 129 57.4
BcaC04g20601 Brassica carinata HOM05D006981 ORTHO05D008719 2.0e-34 149.4 115 66.1
BolC9t57050H Brassica oleracea HOM05D006981 ORTHO05D008719 2.0e-34 149.4 115 66.1
PSO478G2189 Papaver somniferum HOM05D006981 ORTHO05D008719 2.0e-34 149.4 140 49.3
C09p41630 Brassica napus HOM05D006981 ORTHO05D008719 2.6e-34 149.1 115 66.1
THA.LOC104825097 Tarenaya hassleriana HOM05D006981 ORTHO05D008719 2.6e-34 149.1 135 60.7
BraA10t43072Z Brassica rapa HOM05D006981 ORTHO05D008719 3.4e-34 148.7 115 66.1
AT5G52220 Arabidopsis thaliana HOM05D006981 ORTHO05D008719 4.4e-34 148.3 114 66.7
Thhalv10015042m.g Eutrema salsugineum HOM05D006981 ORTHO05D008719 5.7e-34 147.9 115 66.1
SalBow4G1422 Salvia bowleyana HOM05D006981 ORTHO05D008719 7.5e-34 147.5 115 61.7
BcaB08g35575 Brassica carinata HOM05D006981 ORTHO05D008719 1.7e-33 146.4 115 64.3
HPP92_020865 Vanilla planifolia HOM05D006981 ORTHO05D008719 1.7e-33 146.4 129 55.8
CARHR265140 Cardamine hirsuta HOM05D006981 ORTHO05D008719 2.4e-32 142.5 114 63.2
Potri.015G140200 Populus trichocarpa HOM05D006981 ORTHO05D008719 2.7e-31 139.0 136 55.1
Psat1g030600 Pisum sativum HOM05D006981 ORTHO05D008719 7.7e-31 137.5 88 78.4
Zm00001eb309380 Zea mays HOM05D006981 ORTHO05D008719 7.7e-31 137.5 139 50.4
Sabra15G0150900 Salix brachista HOM05D006981 ORTHO05D008719 1.0e-30 137.1 126 57.9
Pp3c14_5260 Physcomitrium patens HOM05D006981 ORTHO05D008719 8.0e-28 127.5 136 50.0
SHI13798 Sapria himalayana HOM05D006981 ORTHO05D008719 8.0e-28 127.5 148 45.3
AagrBONN_evm.TU.Sc2ySwM_369.83 Anthoceros agrestis HOM05D006981 ORTHO05D008719 1.4e-24 116.7 131 45.8
Manes.14G129556 Manihot esculenta HOM05D006981 ORTHO05D008719 1.8e-24 116.3 80 68.8
SMO141G0174 Selaginella moellendorffii HOM05D006981 ORTHO05D008719 9.2e-24 114.0 118 52.5
Peaxi162Scf00040g00323 Petunia axillaris HOM05D006981 ORTHO05D008719 1.0e-22 110.5 118 49.2
Mapoly0027s0013 Marchantia polymorpha HOM05D006981 ORTHO05D008719 5.0e-22 108.2 132 44.7
Actinidia34099 Actinidia chinensis HOM05D006981 ORTHO05D008719 5.6e-21 104.8 71 64.8
Psat1g030360 Pisum sativum HOM05D006981 ORTHO05D008719 9.8e-18 94.0 50 78.0
Hma1.2p1_0270F.1_g108170 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 1.9e-16 89.7 57 66.7
PRCOL_00004746 Prasinoderma coloniale HOM05D006981 ORTHO05D008719 2.7e-15 85.9 132 33.3
Cre06.g281750 Chlamydomonas reinhardtii HOM05D006981 ORTHO05D008719 1.5e-13 80.1 118 43.2
SEGI_30853 Sequoiadendron giganteum HOM05D006981 ORTHO05D008719 9.5e-13 77.4 81 51.9
CBR_g4805 Chara braunii HOM05D006981 ORTHO05D008719 6.2e-12 74.7 114 40.4


User provided reference genes

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