Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0019897 Lotus japonicus HOM05D005197 ORTHO05D006263 4.9e-52 207.6 110 100.0
Lalb_Chr05g0215321 Lupinus albus HOM05D005197 ORTHO05D006263 2.9e-28 128.6 104 71.2
Glyma.09G216000 Glycine max HOM05D005197 ORTHO05D006263 6.4e-28 127.5 106 73.6
Psat2g143800 Pisum sativum HOM05D005197 ORTHO05D006263 4.1e-27 124.8 101 72.3
Glyma.01G151000 Glycine max HOM05D005197 ORTHO05D006263 4.6e-26 121.3 104 71.2
Medtr5g026380 Medicago truncatula HOM05D005197 ORTHO05D006263 6.0e-26 120.9 103 67.0
TPR.G36193 Trifolium pratense HOM05D005197 ORTHO05D006263 5.6e-24 114.4 99 66.7
TPR.G17242 Trifolium pratense HOM05D005197 ORTHO05D006263 9.5e-24 113.6 100 67.0
Phvul.002G124800 Phaseolus vulgaris HOM05D005197 ORTHO05D006263 3.6e-23 111.7 95 68.4
TPR.G902 Trifolium pratense HOM05D005197 ORTHO05D006263 3.1e-22 108.6 83 73.5
VMungo1215G1205 Vigna mungo HOM05D005197 ORTHO05D006263 4.4e-21 104.8 100 62.0
TAR636G3359 Trochodendron aralioides HOM05D005197 ORTHO05D006263 9.2e-19 97.1 105 52.4
QL12p002196 Quercus lobata HOM05D005197 ORTHO05D006263 2.7e-18 95.5 96 56.2
CiPaw.11G075300 Carya illinoinensis HOM05D005197 ORTHO05D006263 1.0e-17 93.6 97 55.7
Haze_08012 Corylus avellana HOM05D005197 ORTHO05D006263 1.3e-17 93.2 93 61.3
Cfa012646 Carpinus fangiana HOM05D005197 ORTHO05D006263 3.0e-17 92.0 93 61.3
Haze_08014 Corylus avellana HOM05D005197 ORTHO05D006263 3.0e-17 92.0 93 60.2
TPR.G36141 Trifolium pratense HOM05D005197 ORTHO05D006263 3.9e-17 91.7 70 71.4
arahy.Tifrunner.gnm1.ann1.G7W534 Arachis hypogaea HOM05D005197 ORTHO05D006263 1.1e-14 83.6 92 58.7
arahy.Tifrunner.gnm1.ann1.JB60CZ Arachis hypogaea HOM05D005197 ORTHO05D006263 1.1e-14 83.6 92 58.7
Nn3g19194 Nelumbo nucifera HOM05D005197 ORTHO05D006263 1.4e-14 83.2 83 53.0
Actinidia25715 Actinidia chinensis HOM05D005197 ORTHO05D006263 6.9e-14 80.9 82 63.4
ATR0369G001 Amborella trichopoda HOM05D005197 ORTHO05D006263 9.9e-13 77.0 105 42.9
TAR629G2553 Trochodendron aralioides HOM05D005197 ORTHO05D006263 2.2e-12 75.9 95 45.3
CAN.G22.3 Capsicum annuum HOM05D005197 ORTHO05D006263 3.8e-12 75.1 79 53.2
Sopen07g029250 Solanum pennellii HOM05D005197 ORTHO05D006263 3.2e-11 72.0 82 48.8
PGSC0003DMG400041236 Solanum tuberosum HOM05D005197 ORTHO05D006263 3.2e-11 72.0 82 51.2
Nn3g19195 Nelumbo nucifera HOM05D005197 ORTHO05D006263 4.2e-11 71.6 81 46.9
Peaxi162Scf00445g00001 Petunia axillaris HOM05D005197 ORTHO05D006263 4.2e-11 71.6 82 48.8
Haze_08011 Corylus avellana HOM05D005197 ORTHO05D006263 7.8e-10 67.4 79 48.1
Cfa012647 Carpinus fangiana HOM05D005197 ORTHO05D006263 1.0e-09 67.0 79 48.1
Ciclev10002053m.g Citrus clementina HOM05D005197 ORTHO05D006263 1.3e-09 66.6 81 50.6
Oeu057151.1 Olea europaea HOM05D005197 ORTHO05D006263 1.7e-09 66.2 78 44.9
SalBow8G0134 Salvia bowleyana HOM05D005197 ORTHO05D006263 1.7e-09 66.2 81 46.9
SalBow8G0427 Salvia bowleyana HOM05D005197 ORTHO05D006263 1.7e-09 66.2 81 46.9
TWI60G1368 Tripterygium wilfordii HOM05D005197 ORTHO05D006263 1.7e-09 66.2 78 46.2
SGA_v2.0_scaffold121G33048 Striga asiatica HOM05D005197 ORTHO05D006263 2.3e-09 65.9 83 50.6
Nitab4.5_0000183g0040 Nicotiana tabacum HOM05D005197 ORTHO05D006263 3.9e-09 65.1 88 44.3
TWI32G0688 Tripterygium wilfordii HOM05D005197 ORTHO05D006263 5.1e-09 64.7 77 44.2
Cc00_g01150 Coffea canephora HOM05D005197 ORTHO05D006263 6.6e-09 64.3 81 43.2
Eucgr.E01175 Eucalyptus grandis HOM05D012124 ORTHO05D006263 6.6e-09 64.3 68 57.4
Nitab4.5_0004181g0010 Nicotiana tabacum HOM05D005197 ORTHO05D006263 6.6e-09 64.3 83 48.2
CiPaw.10G109500 Carya illinoinensis HOM05D005197 ORTHO05D006263 1.1e-08 63.5 77 45.5
MBI04_g30782_MAGBIO Magnolia biondii HOM05D005197 ORTHO05D006263 1.1e-08 63.5 52 63.5
Atru.chr6.2120 Acer truncatum HOM05D005197 ORTHO05D006263 1.5e-08 63.2 80 42.5
Sed0006364 Sechium edule HOM05D005197 ORTHO05D006263 1.5e-08 63.2 78 42.3
MELO3C016247.2 Cucumis melo HOM05D005197 ORTHO05D006263 1.9e-08 62.8 95 40.0
CANSAT01G1003 Cannabis sativa HOM05D005197 ORTHO05D006263 2.5e-08 62.4 81 40.7
CsaV3_4G006970 Cucumis sativus L. HOM05D005197 ORTHO05D006263 3.3e-08 62.0 95 38.9
MSTRG.13922 Avicennia marina HOM05D005197 ORTHO05D006263 1.3e-07 60.1 81 39.5
ClCG07G011270 Citrullus lanatus HOM05D005197 ORTHO05D006263 1.3e-07 60.1 78 41.0
arahy.Tifrunner.gnm1.ann1.11I9TD Arachis hypogaea HOM05D005197 ORTHO05D006263 2.1e-07 59.3 89 43.8
arahy.Tifrunner.gnm1.ann1.CK7EWS Arachis hypogaea HOM05D005197 ORTHO05D006263 2.1e-07 59.3 89 43.8
Nn1g09229 Nelumbo nucifera HOM05D005197 ORTHO05D006263 2.8e-07 58.9 95 41.1
PGR042G3936 Punica granatum HOM05D005197 ORTHO05D006263 2.8e-07 58.9 77 40.3
QL12p002187 Quercus lobata HOM05D005197 ORTHO05D006263 2.8e-07 58.9 100 34.0
Solyc07g055880.1 Solanum lycopersicum HOM05D005197 ORTHO05D006263 6.2e-07 57.8 57 49.1
RcHm_v2.0_Chr7g0214771 Rosa chinensis HOM05D005197 ORTHO05D006263 8.1e-07 57.4 84 39.3
Potri.001G128600 Populus trichocarpa HOM05D005197 ORTHO05D006263 1.1e-06 57.0 89 43.8
DCAR_030955 Daucus carota HOM05D005197 ORTHO05D006263 1.8e-06 56.2 78 43.6
Eucgr.E01174 Eucalyptus grandis HOM05D005197 ORTHO05D006263 1.8e-06 56.2 85 41.2
EL10Ac5g11882 Beta vulgaris HOM05D005197 ORTHO05D006263 5.3e-06 54.7 85 41.2
MD16G1288300 Malus domestica HOM05D005197 ORTHO05D006263 5.3e-06 54.7 105 34.3
Manes.17G005300 Manihot esculenta HOM05D005197 ORTHO05D006263 6.9e-06 54.3 81 39.5
vmacro19764 Vaccinium macrocarpon HOM05D005197 ORTHO05D006263 6.9e-06 54.3 94 43.6
Zm00001eb227690 Zea mays HOM05D005197 ORTHO05D006263 6.9e-06 54.3 95 40.0
Cpa.g.sc305.1 Carica papaya HOM05D005197 ORTHO05D006263 9.0e-06 53.9 98 37.8
Lj8A379T44 Lonicera japonica HOM05D005197 ORTHO05D006263 9.0e-06 53.9 78 37.2


User provided reference genes

Program Settings