Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0018902 Lotus japonicus HOM05D019677 ORTHO05D000090 1.1e-51 208.8 106 100.0
Lj2g0013660 Lotus japonicus HOM05D000162 ORTHO05D000090 5.7e-27 126.7 113 61.1
Glyma.01G058700 Glycine max HOM05D019677 ORTHO05D000090 3.5e-16 90.9 112 42.9
Glyma.01G059900 Glycine max HOM05D019677 ORTHO05D000090 2.3e-15 88.2 112 42.9
Glyma.07G173300 Glycine max HOM05D000162 ORTHO05D000090 3.0e-15 87.8 110 48.2
Glyma.01G059000 Glycine max HOM05D019677 ORTHO05D000090 1.5e-14 85.5 123 39.0
Lalb_Chr18g0049131 Lupinus albus HOM05D019677 ORTHO05D000090 2.5e-14 84.7 66 57.6
Glyma.02G086700 Glycine max HOM05D019677 ORTHO05D000090 1.6e-13 82.0 95 46.3
TPR.G18222 Trifolium pratense HOM05D000162 ORTHO05D000090 2.8e-13 81.3 103 47.6
TPR.G11943 Trifolium pratense HOM05D000162 ORTHO05D000090 3.6e-13 80.9 102 48.0
Psat5g156080 Pisum sativum HOM05D000162 ORTHO05D000090 1.4e-12 79.0 88 45.5
TPR.G27791 Trifolium pratense HOM05D000162 ORTHO05D000090 1.4e-12 79.0 86 45.3
Glyma.05G151600 Glycine max HOM05D000162 ORTHO05D000090 5.2e-12 77.0 131 42.7
Medtr8g083130 Medicago truncatula HOM05D000162 ORTHO05D000090 8.9e-12 76.3 80 50.0
Glyma.16G206551 Glycine max HOM05D000162 ORTHO05D000090 1.5e-11 75.5 102 42.2
Medtr3g054110 Medicago truncatula HOM05D000162 ORTHO05D000090 1.5e-11 75.5 108 38.0
Glyma.09G156000 Glycine max HOM05D000162 ORTHO05D000090 2.0e-11 75.1 89 48.3
Lalb_Chr13g0294781 Lupinus albus HOM05D000162 ORTHO05D000090 2.6e-11 74.7 107 42.1
Glyma.08G108400 Glycine max HOM05D000162 ORTHO05D000090 7.5e-11 73.2 75 50.7
arahy.Tifrunner.gnm1.ann1.E94DPC Arachis hypogaea HOM05D009346 ORTHO05D000090 2.2e-10 71.6 94 41.5
arahy.Tifrunner.gnm1.ann1.W9XRJL Arachis hypogaea HOM05D009346 ORTHO05D003288 4.9e-10 70.5 96 43.8
Psat7g075280 Pisum sativum HOM05D000162 ORTHO05D000090 4.9e-10 70.5 81 44.4
Ca_17997_v3 Cicer arietinum L. HOM05D000162 ORTHO05D000090 6.4e-10 70.1 93 38.7
arahy.Tifrunner.gnm1.ann1.RX4XEC Arachis hypogaea HOM05D009346 ORTHO05D000090 8.3e-10 69.7 83 45.8
arahy.Tifrunner.gnm1.ann1.K4KTGW Arachis hypogaea HOM05D000162 ORTHO05D000090 1.4e-09 68.9 78 46.2
arahy.Tifrunner.gnm1.ann1.8MI9U1 Arachis hypogaea HOM05D009346 ORTHO05D000090 3.2e-09 67.8 112 38.4
Phvul.002G198150 Phaseolus vulgaris HOM05D000162 ORTHO05D000090 4.1e-09 67.4 61 49.2
Phvul.002G204300 Phaseolus vulgaris HOM05D000162 ORTHO05D000090 4.1e-09 67.4 108 38.0
VMungo0251G3087 Vigna mungo HOM05D000162 ORTHO05D000090 4.1e-09 67.4 61 50.8
arahy.Tifrunner.gnm1.ann1.78B0B6 Arachis hypogaea HOM05D000162 ORTHO05D000090 9.2e-09 66.2 78 46.2
VMungo0464G2029 Vigna mungo HOM05D000162 ORTHO05D000090 2.0e-08 65.1 97 41.2
Phvul.004G131300 Phaseolus vulgaris HOM05D000162 ORTHO05D000090 2.7e-08 64.7 90 43.3
QL03p008587 Quercus lobata HOM05D000162 ORTHO05D000090 2.7e-08 64.7 98 35.7
Lj4g0007849 Lotus japonicus HOM05D000162 ORTHO05D000090 1.0e-07 62.8 76 43.4
QL03p013302 Quercus lobata HOM05D000162 ORTHO05D000090 1.3e-07 62.4 76 40.8
QL03p013836 Quercus lobata HOM05D000162 ORTHO05D000090 1.7e-07 62.0 98 33.7
QL03p014804 Quercus lobata HOM05D000162 ORTHO05D000090 1.7e-07 62.0 98 34.7
QL03p018073 Quercus lobata HOM05D000162 ORTHO05D000090 1.7e-07 62.0 98 32.7
QL03p013262 Quercus lobata HOM05D000162 ORTHO05D000090 5.0e-07 60.5 107 33.6
THA.LOC104814333 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 8.6e-07 59.7 100 38.0
arahy.Tifrunner.gnm1.ann1.K7FXBU Arachis hypogaea HOM05D009346 ORTHO05D012019 1.1e-06 59.3 47 51.1
QL03p013269 Quercus lobata HOM05D000162 ORTHO05D000090 1.1e-06 59.3 84 38.1
QL03p017801 Quercus lobata HOM05D000162 ORTHO05D000090 1.1e-06 59.3 98 33.7
Lj8P591T11 Lonicera japonica HOM05D000162 ORTHO05D000090 1.5e-06 58.9 50 52.0
QL03p012973 Quercus lobata HOM05D000162 ORTHO05D000090 1.5e-06 58.9 62 40.3
QL03p013141 Quercus lobata HOM05D000162 ORTHO05D000090 1.5e-06 58.9 74 39.2
QL03p014424 Quercus lobata HOM05D000162 ORTHO05D000090 1.5e-06 58.9 98 32.7
QL04p042212 Quercus lobata HOM05D000162 ORTHO05D000090 1.5e-06 58.9 84 36.9
SalBow7G2569 Salvia bowleyana HOM05D000162 ORTHO05D000090 1.9e-06 58.5 109 33.0
Thecc.05G299000 Theobroma cacao HOM05D000162 ORTHO05D000090 1.9e-06 58.5 96 38.5
Lj8P594T18 Lonicera japonica HOM05D000162 ORTHO05D000090 2.5e-06 58.2 55 47.3
QL03p013984 Quercus lobata HOM05D000162 ORTHO05D000090 2.5e-06 58.2 92 34.8
CSS0039047 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 3.3e-06 57.8 96 34.4
QL03p009219 Quercus lobata HOM05D000162 ORTHO05D000090 3.3e-06 57.8 62 41.9
QL09p001249 Quercus lobata HOM05D000162 ORTHO05D000090 3.3e-06 57.8 93 32.3
Rhsim02G0033600 Rhododendron simsii HOM05D000162 ORTHO05D000090 3.3e-06 57.8 57 47.4
TWI38G2180 Tripterygium wilfordii HOM05D000162 ORTHO05D000090 3.3e-06 57.8 77 40.3
HanXRQChr07g0203991 Helianthus annuus HOM05D000162 ORTHO05D000090 4.3e-06 57.4 83 36.1
Hma1.2p1_1798F.1_g302890 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 4.3e-06 57.4 99 35.4
QL03p009051 Quercus lobata HOM05D000162 ORTHO05D000090 4.3e-06 57.4 62 41.9
QL03p014838 Quercus lobata HOM05D000162 ORTHO05D000090 4.3e-06 57.4 80 40.0
PGSC0003DMG400022036 Solanum tuberosum HOM05D000162 ORTHO05D000090 4.3e-06 57.4 85 34.1
QL03p013273 Quercus lobata HOM05D000162 ORTHO05D000090 5.6e-06 57.0 76 38.2
QL03p014414 Quercus lobata HOM05D000162 ORTHO05D000090 5.6e-06 57.0 86 36.0
Sopen06g002700 Solanum pennellii HOM05D000162 ORTHO05D000090 5.6e-06 57.0 87 36.8
Hma1.2p1_1276F.1_g272140 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 7.3e-06 56.6 89 34.8
Lsat_1_v5_gn_0_27560 Lactuca sativa HOM05D000162 ORTHO05D000090 7.3e-06 56.6 96 37.5
QL03p014045 Quercus lobata HOM05D000162 ORTHO05D000090 7.3e-06 56.6 98 33.7
QL03p014280 Quercus lobata HOM05D000162 ORTHO05D000090 7.3e-06 56.6 98 30.6
C09p19330 Brassica napus HOM05D000162 ORTHO05D000090 9.5e-06 56.2 90 41.1
BolC9t54844H Brassica oleracea HOM05D000162 ORTHO05D000090 9.5e-06 56.2 90 41.1
HanXRQChr03g0090941 Helianthus annuus HOM05D000162 ORTHO05D000090 9.5e-06 56.2 110 32.7
QL03p013240 Quercus lobata HOM05D000162 ORTHO05D000090 9.5e-06 56.2 59 39.0
QL03p040069 Quercus lobata HOM05D000162 ORTHO05D000090 9.5e-06 56.2 89 37.1


User provided reference genes

Program Settings