Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0018175 Lotus japonicus HOM05D004770 ORTHO05D005572 4.7e-109 397.9 206 100.0
TPR.G25688 Trifolium pratense HOM05D004770 ORTHO05D005572 4.5e-91 338.2 195 86.7
Hma1.2p1_2357F.1_g320590 Hydrangea macrophylla HOM05D004770 ORTHO05D005572 4.9e-90 334.7 195 85.6
Medtr3g465790 Medicago truncatula HOM05D004770 ORTHO05D005572 4.9e-90 334.7 195 86.2
Glyma.18G056100 Glycine max HOM05D004770 ORTHO05D005572 1.4e-89 333.2 195 86.7
Ca_15021_v3 Cicer arietinum L. HOM05D004770 ORTHO05D005572 1.9e-89 332.8 195 85.6
Phvul.006G075100 Phaseolus vulgaris HOM05D004770 ORTHO05D005572 1.9e-89 332.8 195 85.6
Lj3g0010058 Lotus japonicus HOM05D004770 ORTHO05D005572 7.1e-89 330.9 174 95.4
Lalb_Chr18g0051481 Lupinus albus HOM05D004770 ORTHO05D005572 9.3e-89 330.5 195 86.2
Potri.002G049900 Populus trichocarpa HOM05D004770 ORTHO05D005572 1.2e-88 330.1 195 83.6
CSS0005681 Camellia sinensis var. sinensis HOM05D004770 ORTHO05D005572 1.6e-88 329.7 195 84.1
CiPaw.07G089000 Carya illinoinensis HOM05D004770 ORTHO05D005572 1.6e-88 329.7 195 83.6
Cfa006174 Carpinus fangiana HOM05D004770 ORTHO05D005572 2.7e-88 328.9 195 83.6
Cc01_g06090 Coffea canephora HOM05D004770 ORTHO05D005572 2.7e-88 328.9 195 83.6
Manes.01G205200 Manihot esculenta HOM05D004770 ORTHO05D005572 2.7e-88 328.9 195 83.6
VMungo0540G0250 Vigna mungo HOM05D004770 ORTHO05D005572 4.6e-88 328.2 195 84.1
Nn6g34126 Nelumbo nucifera HOM05D004770 ORTHO05D005572 7.9e-88 327.4 195 83.6
Rhsim13G0027500 Rhododendron simsii HOM05D004770 ORTHO05D005572 7.9e-88 327.4 195 83.6
QL12p020786 Quercus lobata HOM05D004770 ORTHO05D005572 1.8e-87 326.2 190 85.8
CSS0032403 Camellia sinensis var. sinensis HOM05D004770 ORTHO05D005572 2.3e-87 325.9 195 83.6
Eucgr.G02085 Eucalyptus grandis HOM05D004770 ORTHO05D005572 2.3e-87 325.9 195 84.1
VMungo0720G0347 Vigna mungo HOM05D004770 ORTHO05D005572 2.3e-87 325.9 195 84.1
Potri.005G212800 Populus trichocarpa HOM05D004770 ORTHO05D005572 3.0e-87 325.5 196 83.7
QL01p010878 Quercus lobata HOM05D004770 ORTHO05D005572 3.9e-87 325.1 195 83.6
Dinv34783 Davidia involucrata HOM05D004770 ORTHO05D005572 5.1e-87 324.7 195 82.6
Nn1g02388 Nelumbo nucifera HOM05D004770 ORTHO05D005572 8.7e-87 323.9 192 82.8
Nitab4.5_0004355g0020 Nicotiana tabacum HOM05D004770 ORTHO05D005572 8.7e-87 323.9 195 83.1
Sabra05G0162600 Salix brachista HOM05D004770 ORTHO05D005572 8.7e-87 323.9 196 84.2
Nitab4.5_0000759g0280 Nicotiana tabacum HOM05D004770 ORTHO05D005572 1.1e-86 323.6 195 83.1
AUR62032312 Chenopodium quinoa HOM05D004770 ORTHO05D005572 1.9e-86 322.8 195 80.5
Phvul.007G249400 Phaseolus vulgaris HOM05D004770 ORTHO05D005572 1.9e-86 322.8 195 83.1
Atru.chr5.1488 Acer truncatum HOM05D004770 ORTHO05D005572 2.5e-86 322.4 195 82.1
TAR362G0723 Trochodendron aralioides HOM05D004770 ORTHO05D005572 2.5e-86 322.4 195 83.1
Actinidia24914 Actinidia chinensis HOM05D004770 ORTHO05D005572 3.3e-86 322.0 191 81.7
Lj1A49T61 Lonicera japonica HOM05D004770 ORTHO05D005572 7.4e-86 320.9 195 82.6
Gorai.008G003100 Gossypium raimondii HOM05D004770 ORTHO05D005572 9.6e-86 320.5 195 81.0
vmacro02598 Vaccinium macrocarpon HOM05D004770 ORTHO05D005572 9.6e-86 320.5 196 83.2
CAN.G1549.14 Capsicum annuum HOM05D004770 ORTHO05D005572 1.3e-85 320.1 196 82.1
Gohir.D12G003300 Gossypium hirsutum HOM05D004770 ORTHO05D005572 1.3e-85 320.1 195 81.0
Lj3A581T22 Lonicera japonica HOM05D004770 ORTHO05D005572 1.3e-85 320.1 195 82.1
Solyc06g084160.4 Solanum lycopersicum HOM05D004770 ORTHO05D005572 2.1e-85 319.3 196 83.2
GSVIVG01001190001 Vitis vinifera HOM05D004770 ORTHO05D005572 2.8e-85 318.9 195 82.1
PGR031G3940 Punica granatum HOM05D004770 ORTHO05D005572 3.7e-85 318.5 192 81.2
TWI39G0629 Tripterygium wilfordii HOM05D004770 ORTHO05D005572 4.8e-85 318.2 195 80.5
CANSAT80G2828 Cannabis sativa HOM05D004770 ORTHO05D005572 6.2e-85 317.8 195 81.0
Thecc.01G273700 Theobroma cacao HOM05D004770 ORTHO05D005572 8.2e-85 317.4 195 81.0
Gohir.A12G003600 Gossypium hirsutum HOM05D004770 ORTHO05D005572 1.1e-84 317.0 195 80.0
Sabra02G0040800 Salix brachista HOM05D004770 ORTHO05D005572 1.1e-84 317.0 198 81.3
Sopen06g035540 Solanum pennellii HOM05D004770 ORTHO05D005572 1.8e-84 316.2 196 82.7
PGSC0003DMG400017838 Solanum tuberosum HOM05D004770 ORTHO05D005572 1.8e-84 316.2 195 81.0
HanXRQChr08g0213371 Helianthus annuus HOM05D004770 ORTHO05D005572 2.4e-84 315.8 195 79.0
PGSC0003DMG400020135 Solanum tuberosum HOM05D004770 ORTHO05D005572 2.4e-84 315.8 196 82.1
Duzib138G1187 Durio zibethinus HOM05D004770 ORTHO05D005572 3.1e-84 315.5 195 80.5
Nitab4.5_0000208g0100 Nicotiana tabacum HOM05D004770 ORTHO05D005572 3.1e-84 315.5 195 80.0
Aqoxy2G03435 Aquilegia oxysepala HOM05D004770 ORTHO05D005572 4.0e-84 315.1 195 81.0
Oeu025750.1 Olea europaea HOM05D004770 ORTHO05D005572 4.0e-84 315.1 187 83.4
Peaxi162Scf00783g00122 Petunia axillaris HOM05D004770 ORTHO05D005572 4.0e-84 315.1 191 82.2
SGA_v2.0_scaffold1G00513 Striga asiatica HOM05D004770 ORTHO05D005572 5.3e-84 314.7 195 78.5
unitig_0.g135 Utricularia gibba HOM05D004770 ORTHO05D005572 5.3e-84 314.7 195 77.9
Ciclev10022091m.g Citrus clementina HOM05D004770 ORTHO05D005572 6.9e-84 314.3 195 80.0
Actinidia00788 Actinidia chinensis HOM05D004770 ORTHO05D005572 9.0e-84 313.9 195 81.0
FAN20G2343 Fragaria x ananassa HOM05D004770 ORTHO05D005572 9.0e-84 313.9 197 81.2
arahy.Tifrunner.gnm1.ann1.RIN6C8 Arachis hypogaea HOM05D004770 ORTHO05D005572 1.2e-83 313.5 194 82.0
arahy.Tifrunner.gnm1.ann1.YE39MU Arachis hypogaea HOM05D004770 ORTHO05D005572 1.2e-83 313.5 194 81.4
arahy.Tifrunner.gnm1.ann1.W9SXTW Arachis hypogaea HOM05D004770 ORTHO05D005572 2.6e-83 312.4 194 82.0
Lsat_1_v5_gn_5_186200 Lactuca sativa HOM05D004770 ORTHO05D005572 2.6e-83 312.4 185 83.2
BcaNung03978 Brassica carinata HOM05D004770 ORTHO05D005572 3.4e-83 312.0 195 79.5
A06p36610 Brassica napus HOM05D004770 ORTHO05D005572 4.5e-83 311.6 195 79.0
BraA06t26586Z Brassica rapa HOM05D004770 ORTHO05D005572 4.5e-83 311.6 195 79.0
Migut.D00330 Erythranthe guttata HOM05D004770 ORTHO05D005572 4.5e-83 311.6 188 82.4
MBI02_g08255_MAGBIO Magnolia biondii HOM05D004770 ORTHO05D005572 4.5e-83 311.6 183 83.1
Psat2g184920 Pisum sativum HOM05D004770 ORTHO05D005572 4.5e-83 311.6 233 71.2
DCAR_002713 Daucus carota HOM05D004770 ORTHO05D005572 5.8e-83 311.2 195 80.0
ECA248G2232 Erigeron canadensis HOM05D004770 ORTHO05D005572 5.8e-83 311.2 195 77.9
ATR0665G226 Amborella trichopoda HOM05D004770 ORTHO05D005572 7.6e-83 310.8 196 78.6
BcaNung02803 Brassica carinata HOM05D004770 ORTHO05D005572 7.6e-83 310.8 195 79.5
Thhalv10004885m.g Eutrema salsugineum HOM05D004770 ORTHO05D005572 7.6e-83 310.8 187 81.3
THA.LOC104817561 Tarenaya hassleriana HOM05D004770 ORTHO05D005572 7.6e-83 310.8 185 82.7
arahy.Tifrunner.gnm1.ann1.S84LE1 Arachis hypogaea HOM05D004770 ORTHO05D005572 1.0e-82 310.5 194 81.4
ClCG03G016560 Citrullus lanatus HOM05D004770 ORTHO05D005572 1.0e-82 310.5 195 79.0
PSO832G1010 Papaver somniferum HOM05D004770 ORTHO05D005572 1.0e-82 310.5 195 78.5
RcHm_v2.0_Chr6g0290401 Rosa chinensis HOM05D004770 ORTHO05D005572 1.0e-82 310.5 197 80.7
C07p41870 Brassica napus HOM05D004770 ORTHO05D005572 1.3e-82 310.1 195 79.5
Migut.N02033 Erythranthe guttata HOM05D004770 ORTHO05D005572 2.2e-82 309.3 195 77.4
MELO3C015367.2 Cucumis melo HOM05D004770 ORTHO05D005572 3.8e-82 308.5 195 76.9
Zm00001eb222890 Zea mays HOM05D004770 ORTHO05D005572 3.8e-82 308.5 183 83.1
Cpa.g.sc41.63 Carica papaya HOM05D004770 ORTHO05D005572 4.9e-82 308.1 191 80.6
Sopen08g001150 Solanum pennellii HOM05D004770 ORTHO05D005572 6.5e-82 307.8 195 79.5
EL10Ac5g10525 Beta vulgaris HOM05D004770 ORTHO05D005572 8.4e-82 307.4 195 77.9
SalBow7G1168 Salvia bowleyana HOM05D004770 ORTHO05D005572 8.4e-82 307.4 195 76.4
AT5G26110 Arabidopsis thaliana HOM05D004770 ORTHO05D005572 1.1e-81 307.0 195 77.9
Sed0021970 Sechium edule HOM05D004770 ORTHO05D005572 1.1e-81 307.0 187 81.8
Solyc08g005140.3 Solanum lycopersicum HOM05D004770 ORTHO05D005572 1.4e-81 306.6 195 78.5
vmacro14906 Vaccinium macrocarpon HOM05D004770 ORTHO05D005572 1.4e-81 306.6 185 83.2
Aa31LG10G17080 Aethionema arabicum HOM05D004770 ORTHO05D005572 1.9e-81 306.2 195 77.9
CsaV3_1G039420 Cucumis sativus L. HOM05D004770 ORTHO05D005572 1.9e-81 306.2 192 78.1
MD11G1280900 Malus domestica HOM05D004770 ORTHO05D005572 1.9e-81 306.2 198 80.8
Nitab4.5_0006132g0020 Nicotiana tabacum HOM05D004770 ORTHO05D005572 4.2e-81 305.1 196 77.6
Sp2g21620 Schrenkiella parvula HOM05D004770 ORTHO05D005572 4.2e-81 305.1 195 76.4
COL.COLO4_09057 Corchorus olitorius HOM05D001769 ORTHO05D001695 5.5e-81 304.7 175 84.6
SalBow4G2779 Salvia bowleyana HOM05D004770 ORTHO05D005572 7.1e-81 304.3 195 76.4
PSO170G2661 Papaver somniferum HOM05D004770 ORTHO05D005572 9.3e-81 303.9 195 76.9
HPP92_017651 Vanilla planifolia HOM05D004770 ORTHO05D005572 3.5e-80 302.0 195 75.9
AL2G11930 Arabidopsis lyrata HOM05D004770 ORTHO05D005572 4.6e-80 301.6 195 75.9
CARHR187390 Cardamine hirsuta HOM05D004770 ORTHO05D005572 4.6e-80 301.6 195 74.9
DCAR_012498 Daucus carota HOM05D004770 ORTHO05D005572 4.6e-80 301.6 195 78.5
FAN27G1754 Fragaria x ananassa HOM05D004770 ORTHO05D005572 4.6e-80 301.6 201 77.1
Hund02843 Selenicereus undatus HOM05D004770 ORTHO05D005572 1.8e-79 299.7 195 75.4
Carub.0006s2388 Capsella rubella HOM05D004770 ORTHO05D005572 2.3e-79 299.3 195 75.4
BolC7t44719H Brassica oleracea HOM05D004770 ORTHO05D005572 6.7e-79 297.7 218 71.1
PSO210G1988 Papaver somniferum HOM05D004770 ORTHO05D005572 1.1e-78 297.0 190 76.8
Carub.0005s0602 Capsella rubella HOM05D004770 ORTHO05D005572 1.9e-78 296.2 196 75.0
AUR62012543 Chenopodium quinoa HOM05D004770 ORTHO05D005572 1.9e-78 296.2 174 82.2
Haze_04673 Corylus avellana HOM05D004770 ORTHO05D005572 5.7e-78 294.7 195 77.4
MBI15_g39353_MAGBIO Magnolia biondii HOM05D004770 ORTHO05D005572 4.1e-76 288.5 173 80.9
Prupe.8G236800 Prunus persica HOM05D004770 ORTHO05D005572 4.1e-76 288.5 180 81.7
SEGI_22603 Sequoiadendron giganteum HOM05D004770 ORTHO05D005572 9.3e-73 277.3 196 72.4
SEGI_19127 Sequoiadendron giganteum HOM05D004770 ORTHO05D005572 1.8e-71 273.1 182 74.7
CAN.G1549.26 Capsicum annuum HOM05D004770 ORTHO05D005572 4.1e-68 261.9 195 70.8
Lj6g0011383 Lotus japonicus HOM05D004770 ORTHO05D005572 6.5e-66 254.6 132 96.2
Mapoly0133s0052 Marchantia polymorpha HOM05D004770 ORTHO05D005572 1.4e-65 253.4 182 69.8
Sc05g0001180 Simmondsia chinensis HOM05D004770 ORTHO05D005572 1.4e-63 246.9 153 78.4
Glyma.17G044400 Glycine max HOM05D004770 ORTHO05D005572 1.5e-62 243.4 188 69.1
Pp3c15_20330 Physcomitrium patens HOM05D004770 ORTHO05D005572 3.7e-61 238.8 186 62.9
CSS0010466 Camellia sinensis var. sinensis HOM05D004770 ORTHO05D005572 1.4e-60 236.9 194 66.0
Lsat_1_v5_gn_3_83521 Lactuca sativa HOM05D004770 ORTHO05D005572 5.3e-60 235.0 154 77.9
SMO358G0317 Selaginella moellendorffii HOM05D004770 ORTHO05D005572 1.0e-58 230.7 184 64.1
Manes.05G078700 Manihot esculenta HOM05D004770 ORTHO05D005572 7.2e-57 224.6 172 69.2
AagrBONN_evm.TU.Sc2ySwM_362.2288 Anthoceros agrestis HOM05D004770 ORTHO05D005572 6.7e-55 218.0 177 62.7
QL01p011010 Quercus lobata HOM05D004770 ORTHO05D005572 1.1e-54 217.2 127 84.3
Psat6g025640 Pisum sativum HOM05D004770 ORTHO05D005572 9.7e-54 214.2 195 61.0
SGA_v2.0_scaffold80G25747 Striga asiatica HOM05D004770 ORTHO05D005572 3.7e-53 212.2 129 77.5
FvH4_2g23150 Fragaria vesca HOM05D004770 ORTHO05D005572 8.2e-53 211.1 134 79.9
Sp5g00290 Schrenkiella parvula HOM05D004770 ORTHO05D005572 4.1e-52 208.8 132 75.8
AL2G11990 Arabidopsis lyrata HOM05D004770 ORTHO05D005572 5.9e-51 204.9 132 74.2
SHI22269 Sapria himalayana HOM05D004770 ORTHO05D005572 1.3e-50 203.8 131 75.6
CBR_g40454 Chara braunii HOM05D004770 ORTHO05D005572 2.1e-48 196.4 205 50.7
MCO10G359 Micromonas commoda HOM05D004770 ORTHO05D005572 1.7e-42 176.8 174 52.9
RcHm_v2.0_Chr3g0476231 Rosa chinensis HOM05D004770 ORTHO05D005572 5.0e-42 175.3 121 76.0
Actinidia09114 Actinidia chinensis HOM05D004770 ORTHO05D005572 3.0e-39 166.0 115 73.9
Zm00001eb432290 Zea mays HOM05D004770 ORTHO05D005572 1.2e-32 144.1 149 56.4
Actinidia21134 Actinidia chinensis HOM05D004770 ORTHO05D005572 9.8e-30 134.4 87 77.0
Glyma.02G191000 Glycine max HOM05D004770 ORTHO05D005572 1.8e-28 130.2 134 57.5
Zm00001eb031460 Zea mays HOM05D004770 ORTHO05D005572 1.0e-26 124.4 82 69.5
TAR633G1205 Trochodendron aralioides HOM05D004770 ORTHO05D005572 1.5e-25 120.6 113 60.2
Actinidia21133 Actinidia chinensis HOM05D004770 ORTHO05D005572 3.7e-21 105.9 62 80.6
CDE04G0604 Ceratophyllum demersum HOM05D004770 ORTHO05D005572 1.8e-20 103.6 63 76.2
TAR633G0687 Trochodendron aralioides HOM05D004770 ORTHO05D005572 3.3e-17 92.8 51 88.2
TAR636G2941 Trochodendron aralioides HOM05D004770 ORTHO05D005572 1.4e-15 87.4 97 51.5
AT1G08120 Arabidopsis thaliana HOM05D004770 ORTHO05D005572 5.2e-15 85.5 70 67.1
BcaC03g17841 Brassica carinata HOM05D004770 ORTHO05D005572 3.2e-12 76.3 68 57.4
GSVIVG01020385001 Vitis vinifera HOM05D004770 ORTHO05D005572 4.6e-11 72.4 114 41.2
GSVIVG01017585001 Vitis vinifera HOM05D004770 ORTHO05D005572 3.1e-07 59.7 63 52.4
Cre06.g306800 Chlamydomonas reinhardtii HOM05D004770 ORTHO05D005572 5.2e-07 58.9 141 31.2
Prupe.7G035700 Prunus persica HOM05D000223 ORTHO05D008670 5.8e-06 55.5 155 29.7


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