Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0018003 Lotus japonicus HOM05D008115 ORTHO05D010112 1.3e-103 379.8 195 100.0
Medtr5g030520 Medicago truncatula HOM05D008115 ORTHO05D010112 4.0e-65 251.9 199 72.9
Glyma.09G204000 Glycine max HOM05D008115 ORTHO05D010112 3.0e-60 235.7 196 70.9
arahy.Tifrunner.gnm1.ann1.6THG3J Arachis hypogaea HOM05D008115 ORTHO05D010112 1.5e-56 223.4 200 67.0
arahy.Tifrunner.gnm1.ann1.FLG01L Arachis hypogaea HOM05D008115 ORTHO05D010112 1.5e-56 223.4 200 67.0
VMungo1215G1226 Vigna mungo HOM05D008115 ORTHO05D010112 5.8e-56 221.5 197 66.5
Psat2g136120 Pisum sativum HOM05D008115 ORTHO05D010112 1.2e-53 213.8 206 65.0
TPR.G15446 Trifolium pratense HOM05D008115 ORTHO05D010112 4.7e-50 201.8 185 66.5
Phvul.002G142000 Phaseolus vulgaris HOM05D008115 ORTHO05D010112 5.2e-49 198.4 204 62.3
Prupe.5G036900 Prunus persica HOM05D008115 ORTHO05D010112 3.8e-31 139.0 202 47.0
Potri.003G091600 Populus trichocarpa HOM05D008115 ORTHO05D010112 7.3e-27 124.8 191 46.1
Sed0022703 Sechium edule HOM05D008115 ORTHO05D010112 1.6e-26 123.6 203 44.8
Lalb_Chr05g0216121 Lupinus albus HOM05D008115 ORTHO05D010112 2.1e-26 123.2 117 65.8
Sabra03G0061200 Salix brachista HOM05D001142 ORTHO05D003453 4.0e-25 119.0 190 46.3
Thecc.03G228100 Theobroma cacao HOM05D008115 ORTHO05D010112 5.8e-24 115.2 186 47.3
Duzib205G0809 Durio zibethinus HOM05D008115 ORTHO05D010112 2.9e-23 112.8 185 44.3
Dinv28956 Davidia involucrata HOM05D000381 ORTHO05D010112 1.9e-22 110.2 190 45.8
FAN08G1703 Fragaria x ananassa HOM05D008115 ORTHO05D010112 2.4e-22 109.8 205 42.0
FAN04G2182 Fragaria x ananassa HOM05D008115 ORTHO05D010112 3.2e-22 109.4 204 41.7
FAN13G1458 Fragaria x ananassa HOM05D008115 ORTHO05D010112 4.2e-22 109.0 217 40.1
Gohir.A08G156700 Gossypium hirsutum HOM05D008115 ORTHO05D010112 5.4e-22 108.6 192 45.8
FAN18G3637 Fragaria x ananassa HOM05D008115 ORTHO05D010112 9.3e-22 107.8 205 41.5
Gohir.D08G177100 Gossypium hirsutum HOM05D008115 ORTHO05D010112 2.7e-21 106.3 192 44.8
Gorai.004G185300 Gossypium raimondii HOM05D008115 ORTHO05D010112 2.7e-21 106.3 192 44.8
Ciclev10012855m.g Citrus clementina HOM05D008115 ORTHO05D010112 6.0e-21 105.1 198 42.4
GSVIVG01013162001 Vitis vinifera HOM05D008115 ORTHO05D010112 7.9e-21 104.8 188 41.5
QL12p005248 Quercus lobata HOM05D008115 ORTHO05D010112 1.0e-20 104.4 190 46.8
QL12p005415 Quercus lobata HOM05D008115 ORTHO05D010112 1.0e-20 104.4 190 46.8
CiPaw.12G063600 Carya illinoinensis HOM05D008115 ORTHO05D010112 2.3e-20 103.2 195 42.6
Thhalv10001038m.g Eutrema salsugineum HOM05D008115 ORTHO05D010112 8.1e-18 94.7 191 38.2
Carub.0008s0112 Capsella rubella HOM05D008115 ORTHO05D010112 1.4e-17 94.0 190 37.9
TWI15G1224 Tripterygium wilfordii HOM05D008115 ORTHO05D010112 4.0e-17 92.4 195 40.5
Sp2g11610 Schrenkiella parvula HOM05D008115 ORTHO05D010112 9.0e-17 91.3 197 37.1
PGR042G2453 Punica granatum HOM05D008115 ORTHO05D010112 1.5e-16 90.5 196 41.3
BcaC04g21681 Brassica carinata HOM05D008115 ORTHO05D010112 5.8e-16 88.6 197 37.6
Glyma.01G018900 Glycine max HOM05D008115 ORTHO05D010112 1.3e-15 87.4 99 62.6
CARHR174700 Cardamine hirsuta HOM05D008115 ORTHO05D010112 1.7e-15 87.0 190 36.8
A09p22550 Brassica napus HOM05D008115 ORTHO05D010112 3.8e-15 85.9 196 36.7
CsaV3_3G049200 Cucumis sativus L. HOM05D008115 ORTHO05D010112 3.8e-15 85.9 215 36.3
C09p28900 Brassica napus HOM05D008115 ORTHO05D010112 3.2e-14 82.8 142 40.1
Manes.15G181340 Manihot esculenta HOM05D008115 ORTHO05D010112 3.2e-14 82.8 135 45.2
BcaC03g16890 Brassica carinata HOM05D008115 ORTHO05D010112 4.2e-14 82.4 195 35.9
C02p47870 Brassica napus HOM05D008115 ORTHO05D010112 4.2e-14 82.4 195 35.9
BolC2t10820H Brassica oleracea HOM05D008115 ORTHO05D010112 4.2e-14 82.4 195 35.9
AL8G11540 Arabidopsis lyrata HOM05D008115 ORTHO05D010112 1.6e-13 80.5 198 34.8
BraA02t08049Z Brassica rapa HOM05D008115 ORTHO05D010112 1.6e-13 80.5 193 35.8
AT5G46795 Arabidopsis thaliana HOM05D008115 ORTHO05D010112 3.5e-13 79.3 189 34.4
A02p30340 Brassica napus HOM05D008115 ORTHO05D010112 6.0e-13 78.6 191 35.1
FvH4_5g22030 Fragaria vesca HOM05D008115 ORTHO05D010112 6.0e-13 78.6 156 41.7
Aa31LG9G6090 Aethionema arabicum HOM05D008115 ORTHO05D010112 7.9e-13 78.2 116 41.4
BcaB07g30820 Brassica carinata HOM05D008115 ORTHO05D010112 7.9e-13 78.2 202 36.1
A06p45650 Brassica napus HOM05D008115 ORTHO05D010112 1.5e-11 73.9 100 45.0
THA.LOC104806705 Tarenaya hassleriana HOM05D008115 ORTHO05D010112 1.5e-11 73.9 131 37.4
BcaC06g34346 Brassica carinata HOM05D008115 ORTHO05D010112 9.6e-11 71.2 192 34.4
C07p30110 Brassica napus HOM05D008115 ORTHO05D010112 9.6e-11 71.2 192 34.4
BolC7t43551H Brassica oleracea HOM05D008115 ORTHO05D010112 9.6e-11 71.2 192 34.4
MELO3C030366.2 Cucumis melo HOM05D008115 ORTHO05D010112 1.3e-10 70.9 75 52.0
RcHm_v2.0_Chr7g0209671 Rosa chinensis HOM05D008115 ORTHO05D010112 6.2e-10 68.6 78 47.4
Atru.chr6.1713 Acer truncatum HOM05D008115 ORTHO05D010112 8.2e-10 68.2 143 44.8
BolC9t55752H Brassica oleracea HOM05D008115 ORTHO05D010112 6.9e-09 65.1 74 44.6
CiPaw.11G093100 Carya illinoinensis HOM05D008115 ORTHO05D010112 2.6e-08 63.2 191 34.0
Aqoxy3G02357 Aquilegia oxysepala HOM05D008115 ORTHO05D010112 1.0e-07 61.2 196 36.7
Sc01g0007450 Simmondsia chinensis HOM05D008115 ORTHO05D010112 1.1e-06 57.8 92 42.4
HanXRQChr17g0535821 Helianthus annuus HOM05D038245 ORTHO05D010112 1.4e-06 57.4 207 26.1
Solyc08g150100.1 Solanum lycopersicum HOM05D028028 ORTHO05D010112 1.9e-06 57.0 185 27.6
Peaxi162Scf00981g00031 Petunia axillaris HOM05D008614 ORTHO05D010420 2.5e-06 56.6 114 32.5
AUR62018718 Chenopodium quinoa HOM05D008115 ORTHO05D010112 4.2e-06 55.8 196 31.6
EL10Ac5g12123 Beta vulgaris HOM05D008115 ORTHO05D010112 5.5e-06 55.5 179 33.5
CANSAT21G0744 Cannabis sativa HOM05D008115 ORTHO05D010112 7.1e-06 55.1 151 33.8


User provided reference genes

Program Settings