Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0017871 Lotus japonicus HOM05D008220 ORTHO05D010358 0.0e+00 1317.4 666 100.0
LjContig00583g0009142 Lotus japonicus HOM05D008220 ORTHO05D010358 1.1e-194 684.1 413 86.7
Lj1g0018935 Lotus japonicus HOM05D008220 ORTHO05D010358 1.4e-88 331.6 402 47.0
Lj1g0011459 Lotus japonicus HOM05D008220 ORTHO05D010358 9.1e-53 212.6 333 37.2
Lj6g0001371 Lotus japonicus HOM05D008220 ORTHO05D010358 3.3e-50 204.1 694 29.4
LjContig00141g0011294 Lotus japonicus HOM05D008220 ORTHO05D010358 7.2e-50 203.0 680 29.3
Lj3g0010325 Lotus japonicus HOM05D008220 ORTHO05D010358 1.6e-49 201.8 694 28.8
Lj2g0010794 Lotus japonicus HOM05D008220 ORTHO05D010358 4.0e-48 197.2 542 31.7
Lj2g0009989 Lotus japonicus HOM05D008220 ORTHO05D010358 1.0e-43 182.6 535 30.1
Lj3g0027860 Lotus japonicus HOM05D008220 ORTHO05D010358 2.9e-43 181.0 695 27.9
LjContig00127g0011774 Lotus japonicus HOM05D008220 ORTHO05D010358 6.6e-43 179.9 695 27.8
Lj3g0023441 Lotus japonicus HOM05D008220 ORTHO05D010358 1.1e-42 179.1 270 37.0
Lj3g0019996 Lotus japonicus HOM05D008220 ORTHO05D010358 1.5e-42 178.7 286 35.0
Lj6g0001845 Lotus japonicus HOM05D008220 ORTHO05D010358 2.0e-39 168.3 343 34.1
Lj6g0011493 Lotus japonicus HOM05D008220 ORTHO05D010358 9.8e-39 166.0 251 38.2
Lj6g0021460 Lotus japonicus HOM05D008220 ORTHO05D010358 4.9e-38 163.7 290 37.2
Lj4g0014288 Lotus japonicus HOM05D008220 ORTHO05D010358 6.4e-38 163.3 288 34.7
Lj1g0001129 Lotus japonicus HOM05D008220 ORTHO05D010358 1.0e-35 156.0 553 30.2
Lj6g0014297 Lotus japonicus HOM05D008220 ORTHO05D010358 3.3e-34 151.0 247 34.8
Lj1g0026317 Lotus japonicus HOM05D008220 ORTHO05D010358 4.3e-34 150.6 661 27.2
Lj1g0010052 Lotus japonicus HOM05D008220 ORTHO05D010358 3.6e-33 147.5 240 36.2
Lj5g0002610 Lotus japonicus HOM05D008220 ORTHO05D010358 8.0e-33 146.4 671 25.9
Lj4g0013144 Lotus japonicus HOM05D008220 ORTHO05D010358 1.2e-31 142.5 292 29.1
Lj5g0012072 Lotus japonicus HOM05D008220 ORTHO05D010358 8.3e-30 136.3 336 32.1
Lj2g0013073 Lotus japonicus HOM05D008220 ORTHO05D010358 1.4e-29 135.6 540 27.4
Lj4g0014244 Lotus japonicus HOM05D008220 ORTHO05D010358 4.1e-29 134.0 238 38.2
Lj3g0003280 Lotus japonicus HOM05D008220 ORTHO05D010358 1.2e-28 132.5 306 31.0
Lj5g0003699 Lotus japonicus HOM05D008220 ORTHO05D010358 3.5e-28 131.0 352 30.7
Lj1g0024049 Lotus japonicus HOM05D008220 ORTHO05D010358 4.6e-28 130.6 281 31.0
Lj5g0006780 Lotus japonicus HOM05D008220 ORTHO05D010358 5.1e-27 127.1 251 33.1
LjContig00357g0008125 Lotus japonicus HOM05D008220 ORTHO05D010358 3.6e-25 120.9 362 29.8
Lj5g0005201 Lotus japonicus HOM05D008220 ORTHO05D010358 8.1e-25 119.8 655 23.5
Lj1g0012808 Lotus japonicus HOM05D008220 ORTHO05D010358 1.8e-24 118.6 405 29.6
Lj5g0015440 Lotus japonicus HOM05D008220 ORTHO05D010358 4.0e-24 117.5 287 27.9
Lj6g0019563 Lotus japonicus HOM05D008220 ORTHO05D010358 2.2e-22 111.7 255 31.0
Lj4g0023050 Lotus japonicus HOM05D008220 ORTHO05D010358 3.7e-22 110.9 262 31.3
Lj2g0023598 Lotus japonicus HOM05D008220 ORTHO05D010358 1.9e-21 108.6 491 27.1
Lj1g0010280 Lotus japonicus HOM05D008220 ORTHO05D010358 9.2e-21 106.3 255 26.7
Lj1g0017334 Lotus japonicus HOM05D008220 ORTHO05D010358 2.7e-20 104.8 255 25.9
Lj1g0011765 Lotus japonicus HOM05D008220 ORTHO05D010358 7.3e-18 96.7 277 27.1
Lj3g0028205 Lotus japonicus HOM05D008220 ORTHO05D010358 7.3e-18 96.7 415 28.2
Lj3g0004063 Lotus japonicus HOM05D008220 ORTHO05D010358 1.6e-17 95.5 174 32.2
Lj1g0021549 Lotus japonicus HOM05D008220 ORTHO05D010358 2.1e-17 95.1 207 31.9
TPR.G19363 Trifolium pratense HOM05D002777 ORTHO05D001516 2.1e-17 95.1 411 23.1
Lj2g0027421 Lotus japonicus HOM05D008220 ORTHO05D010358 1.1e-16 92.8 176 31.8
Lj3g0011116 Lotus japonicus HOM05D008220 ORTHO05D010358 5.2e-16 90.5 199 31.7
Lj2g0010122 Lotus japonicus HOM05D008220 ORTHO05D010358 7.6e-15 86.7 209 26.3
LjContig00141g0005868 Lotus japonicus HOM05D008220 ORTHO05D010358 7.6e-15 86.7 617 22.9
Lj2g0019090 Lotus japonicus HOM05D008220 ORTHO05D010358 1.4e-13 82.4 320 23.4
LjContig00081g0006498 Lotus japonicus HOM05D030494 ORTHO05D010358 1.9e-13 82.0 300 25.7
Sc12g0005710 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.6e-12 77.4 327 23.5
Sc21g0001740 Simmondsia chinensis HOM05D011136 ORTHO05D010856 4.6e-12 77.4 317 24.0
COL.COLO4_25415 Corchorus olitorius HOM05D009258 ORTHO05D009583 5.1e-11 73.9 431 22.7
Lj1g0009767 Lotus japonicus HOM05D030494 ORTHO05D010358 5.1e-11 73.9 116 32.8
Lsat_1_v5_gn_5_131521 Lactuca sativa HOM05D003915 ORTHO05D001516 6.6e-11 73.6 346 25.1
LjContig00357g0023212 Lotus japonicus HOM05D002777 ORTHO05D001516 1.1e-10 72.8 351 21.7
Lj6g0024174 Lotus japonicus HOM05D002777 ORTHO05D001516 7.3e-10 70.1 341 24.3
Sc18g0002450 Simmondsia chinensis HOM05D006933 ORTHO05D009629 7.3e-10 70.1 323 22.3
Lj2g0022307 Lotus japonicus HOM05D008220 ORTHO05D010358 1.2e-09 69.3 200 28.0
Thecc.07G067600 Theobroma cacao HOM05D023671 ORTHO05D001516 1.2e-09 69.3 109 35.8
Lj1g0024783 Lotus japonicus HOM05D008220 ORTHO05D010358 2.1e-09 68.6 211 28.9
Sc14g0002620 Simmondsia chinensis HOM05D009209 ORTHO05D011705 2.4e-08 65.1 220 23.6
Lj1g0002722 Lotus japonicus HOM05D008220 ORTHO05D010358 4.0e-08 64.3 219 26.5
Lj6g0023930 Lotus japonicus HOM05D002777 ORTHO05D001516 4.0e-08 64.3 119 27.7
COL.COLO4_27331 Corchorus olitorius HOM05D009258 ORTHO05D009583 6.9e-08 63.5 268 25.4
Sc16g0003440 Simmondsia chinensis HOM05D006933 ORTHO05D009629 6.9e-08 63.5 269 21.6
Glyma.16G096100 Glycine max HOM05D002777 ORTHO05D001516 9.0e-08 63.2 294 24.1
Lj4g0004153 Lotus japonicus HOM05D008220 ORTHO05D010358 9.0e-08 63.2 159 26.4
Medtr1148s0010 Medicago truncatula HOM05D008558 ORTHO05D001516 9.0e-08 63.2 332 20.5
Gohir.A10G205900 Gossypium hirsutum HOM05D000003 ORTHO05D000006 1.2e-07 62.8 361 22.7
Lj5g0007242 Lotus japonicus HOM05D002777 ORTHO05D001516 1.5e-07 62.4 329 22.8
Lj2g0005575 Lotus japonicus HOM05D002777 ORTHO05D001516 2.0e-07 62.0 373 21.7
Psat4g004920 Pisum sativum HOM05D007807 ORTHO05D001516 3.4e-07 61.2 182 25.8
Lj2g0021049 Lotus japonicus HOM05D002777 ORTHO05D001516 4.4e-07 60.8 220 24.1
Psat3g118120 Pisum sativum HOM05D007807 ORTHO05D001516 4.4e-07 60.8 361 20.8
Lj1g0022989 Lotus japonicus HOM05D008220 ORTHO05D010358 5.8e-07 60.5 126 33.3
Ah.01g013230 Amaranthus hybridus HOM05D008762 ORTHO05D011252 7.6e-07 60.1 383 24.5
Lj3g0021978 Lotus japonicus HOM05D002777 ORTHO05D001516 9.9e-07 59.7 347 21.6
Psat0s1204g0040 Pisum sativum HOM05D007807 ORTHO05D001516 9.9e-07 59.7 180 23.3
Medtr8g045280 Medicago truncatula HOM05D008558 ORTHO05D001516 1.7e-06 58.9 176 24.4
Lj4g0021570 Lotus japonicus HOM05D002777 ORTHO05D001516 2.2e-06 58.5 362 22.9
Lj2g0011520 Lotus japonicus HOM05D002777 ORTHO05D001516 2.9e-06 58.2 289 20.1
Psat0s3204g0040 Pisum sativum HOM05D007807 ORTHO05D000006 2.9e-06 58.2 199 22.6
Sc10g0006330 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.9e-06 58.2 156 25.0
ECA248G0911 Erigeron canadensis HOM05D000003 ORTHO05D011516 3.8e-06 57.8 262 23.3
Rhsim13G0125400 Rhododendron simsii HOM05D008219 ORTHO05D009356 3.8e-06 57.8 340 19.7
Sc12g0007420 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.8e-06 57.8 145 24.1
MBI08_g05234_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 4.9e-06 57.4 295 21.7
Psat5g137320 Pisum sativum HOM05D007807 ORTHO05D001516 4.9e-06 57.4 197 24.4
Psat0s287g0120 Pisum sativum HOM05D007807 ORTHO05D001516 6.4e-06 57.0 141 23.4
Psat0s1058g0320 Pisum sativum HOM05D007807 ORTHO05D001516 8.4e-06 56.6 185 24.3


User provided reference genes

Program Settings