Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0017807 Lotus japonicus HOM05D007735 ORTHO05D009638 3.9e-73 278.1 145 100.0
Glyma.01G156500 Glycine max HOM05D007735 ORTHO05D009638 3.5e-42 175.3 140 73.6
Phvul.002G119100 Phaseolus vulgaris HOM05D007735 ORTHO05D009638 3.5e-42 175.3 139 74.8
VMungo1215G0699 Vigna mungo HOM05D007735 ORTHO05D009638 1.3e-41 173.3 139 74.1
TPR.G33757 Trifolium pratense HOM05D001957 ORTHO05D002015 6.6e-41 171.0 145 69.0
Ca_25020_v3 Cicer arietinum L. HOM05D007735 ORTHO05D009638 1.9e-40 169.5 139 68.3
Medtr5g024910 Medicago truncatula HOM05D007735 ORTHO05D009638 4.3e-40 168.3 145 69.0
Glyma.11G088300 Glycine max HOM05D007735 ORTHO05D009638 3.1e-38 162.2 139 69.8
Psat2g147360 Pisum sativum HOM05D007735 ORTHO05D009638 1.2e-37 160.2 145 65.5
Lalb_Chr16g0380221 Lupinus albus HOM05D007735 ORTHO05D009638 9.3e-35 150.6 139 63.3
Lalb_Chr09g0324871 Lupinus albus HOM05D007735 ORTHO05D009638 2.1e-31 139.4 139 61.9
arahy.Tifrunner.gnm1.ann1.Q37N58 Arachis hypogaea HOM05D007735 ORTHO05D009638 1.5e-29 133.3 153 56.9
arahy.Tifrunner.gnm1.ann1.S9U9HD Arachis hypogaea HOM05D007735 ORTHO05D009638 1.5e-29 133.3 153 56.9
Glyma.09G195900 Glycine max HOM05D007735 ORTHO05D009638 4.5e-29 131.7 140 59.3
Glyma.16G114400 Glycine max HOM05D007735 ORTHO05D009638 1.2e-26 123.6 140 53.6
Medtr8g072610 Medicago truncatula HOM05D007735 ORTHO05D009638 2.1e-26 122.9 139 59.0
VMungo0251G0553 Vigna mungo HOM05D007735 ORTHO05D009638 6.0e-26 121.3 142 54.2
Lalb_Chr05g0214991 Lupinus albus HOM05D007735 ORTHO05D009638 1.3e-25 120.2 134 57.5
Phvul.003G272000 Phaseolus vulgaris HOM05D007735 ORTHO05D009638 1.3e-25 120.2 139 54.0
TPR.G19311 Trifolium pratense HOM05D007735 ORTHO05D009638 1.6e-23 113.2 143 53.8
LjContig00247g0020335 Lotus japonicus HOM05D007735 ORTHO05D009638 4.8e-23 111.7 141 55.3
Psat4g107200 Pisum sativum HOM05D007735 ORTHO05D009638 4.8e-23 111.7 139 53.2
Lalb_Chr05g0229481 Lupinus albus HOM05D007735 ORTHO05D009638 6.9e-22 107.8 137 53.3
Cc07_g12240 Coffea canephora HOM05D007735 ORTHO05D009638 2.2e-15 86.3 134 43.3
Cfa007115 Carpinus fangiana HOM05D007735 ORTHO05D009638 1.2e-13 80.5 138 47.1
QL06p053348 Quercus lobata HOM05D007735 ORTHO05D009638 1.5e-13 80.1 135 43.7
Prupe.7G187700 Prunus persica HOM05D007735 ORTHO05D009638 7.7e-13 77.8 145 45.5
Eucgr.J02566 Eucalyptus grandis HOM05D007735 ORTHO05D009638 6.5e-12 74.7 159 39.6
arahy.Tifrunner.gnm1.ann1.KD7YUX Arachis hypogaea HOM05D007735 ORTHO05D009638 8.5e-12 74.3 133 49.6
RcHm_v2.0_Chr2g0096741 Rosa chinensis HOM05D007735 ORTHO05D009638 1.1e-11 73.9 135 41.5
Manes.01G157700 Manihot esculenta HOM05D007735 ORTHO05D009638 3.2e-11 72.4 120 40.8
TAR381G1223 Trochodendron aralioides HOM05D007735 ORTHO05D009638 3.2e-11 72.4 134 42.5
FvH4_1g09950 Fragaria vesca HOM05D007735 ORTHO05D009638 1.8e-09 66.6 138 41.3
FAN19G1654 Fragaria x ananassa HOM05D007735 ORTHO05D009638 1.8e-09 66.6 138 41.3
Nn5g31061 Nelumbo nucifera HOM05D007735 ORTHO05D009638 2.3e-09 66.2 127 42.5
CSS0025501 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 3.0e-09 65.9 130 40.8
Sc03g0004120 Simmondsia chinensis HOM05D007735 ORTHO05D009638 3.9e-09 65.5 133 39.8
FAN23G3070 Fragaria x ananassa HOM05D007735 ORTHO05D009638 6.7e-09 64.7 136 42.6
Peaxi162Scf00918g00052 Petunia axillaris HOM05D007735 ORTHO05D009638 6.7e-09 64.7 133 39.8
FAN28G1635 Fragaria x ananassa HOM05D007735 ORTHO05D009638 8.8e-09 64.3 138 41.3
CSS0016261 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 2.5e-08 62.8 140 39.3
PGSC0003DMG400013637 Solanum tuberosum HOM05D007735 ORTHO05D009638 3.3e-08 62.4 138 39.1
Manes.02G117000 Manihot esculenta HOM05D007735 ORTHO05D009638 4.3e-08 62.0 115 40.0
Nitab4.5_0004448g0030 Nicotiana tabacum HOM05D007735 ORTHO05D009638 5.7e-08 61.6 140 39.3
Sopen02g026900 Solanum pennellii HOM05D007735 ORTHO05D009638 7.4e-08 61.2 138 39.9
Nitab4.5_0000855g0160 Nicotiana tabacum HOM05D007735 ORTHO05D009638 9.7e-08 60.8 139 40.3
Eucgr.I02199 Eucalyptus grandis HOM05D007735 ORTHO05D009638 1.3e-07 60.5 159 30.8
Potri.011G145200 Populus trichocarpa HOM05D007735 ORTHO05D009638 2.2e-07 59.7 142 39.4
Lsat_1_v5_gn_3_69161 Lactuca sativa HOM05D007735 ORTHO05D009638 4.8e-07 58.5 135 39.3
Solyc02g082240.1 Solanum lycopersicum HOM05D007735 ORTHO05D009638 4.8e-07 58.5 139 39.6
Thecc.01G001800 Theobroma cacao HOM05D007735 ORTHO05D009638 4.8e-07 58.5 144 38.9
FAN23G2983 Fragaria x ananassa HOM05D007735 ORTHO05D009638 3.1e-06 55.8 127 41.7
FAN26G0974 Fragaria x ananassa HOM05D007735 ORTHO05D009638 4.1e-06 55.5 128 39.8
DCAR_014121 Daucus carota HOM05D007735 ORTHO05D009638 5.3e-06 55.1 143 35.7
DCAR_014122 Daucus carota HOM05D007735 ORTHO05D009638 5.3e-06 55.1 143 35.7
Sabra11G0130300 Salix brachista HOM05D007735 ORTHO05D009638 5.3e-06 55.1 136 39.0
SGA_v2.0_scaffold108G30951 Striga asiatica HOM05D007735 ORTHO05D009638 5.3e-06 55.1 145 33.8


User provided reference genes

Program Settings