Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0017705 Lotus japonicus HOM05D007258 ORTHO05D008852 7.5e-119 430.6 234 100.0
arahy.Tifrunner.gnm1.ann1.TJ02B2 Arachis hypogaea HOM05D007258 ORTHO05D008852 5.2e-88 328.2 204 81.9
arahy.Tifrunner.gnm1.ann1.GI8EHX Arachis hypogaea HOM05D007258 ORTHO05D008852 1.2e-87 327.0 204 81.4
Glyma.13G053500 Glycine max HOM05D007258 ORTHO05D008852 4.9e-86 321.6 204 80.4
Medtr6g015855 Medicago truncatula HOM05D007258 ORTHO05D008852 7.8e-84 314.3 234 78.2
Lalb_Chr21g0318311 Lupinus albus HOM05D007258 ORTHO05D008852 1.1e-82 310.5 191 79.6
TPR.G4313 Trifolium pratense HOM05D007258 ORTHO05D008852 1.5e-82 310.1 235 80.0
Psat1g066400 Pisum sativum HOM05D007258 ORTHO05D008852 4.3e-82 308.5 195 82.6
VMungo0464G1058 Vigna mungo HOM05D007258 ORTHO05D008852 6.4e-78 294.7 210 72.4
Phvul.004G041100 Phaseolus vulgaris HOM05D007258 ORTHO05D008852 8.7e-75 284.3 203 70.9
Glyma.19G033200 Glycine max HOM05D007258 ORTHO05D008852 8.1e-73 277.7 157 84.7
Ca_20770_v3 Cicer arietinum L. HOM05D000600 ORTHO05D000432 1.8e-72 276.6 155 86.5
Manes.02G057800 Manihot esculenta HOM05D007258 ORTHO05D008852 2.6e-71 272.7 194 71.6
Haze_25378 Corylus avellana HOM05D007258 ORTHO05D008852 9.9e-71 270.8 177 75.7
Cpa.g.sc14.201 Carica papaya HOM05D007258 ORTHO05D008852 1.3e-70 270.4 190 71.6
CiPaw.03G085000 Carya illinoinensis HOM05D007258 ORTHO05D008852 1.3e-70 270.4 185 74.1
CAN.G497.87 Capsicum annuum HOM05D007258 ORTHO05D008852 1.1e-69 267.3 183 72.7
CANSAT64G1331 Cannabis sativa HOM05D007258 ORTHO05D008852 3.2e-69 265.8 182 74.7
Thecc.04G103600 Theobroma cacao HOM05D007258 ORTHO05D008852 2.7e-68 262.7 200 66.5
Ciclev10012686m.g Citrus clementina HOM05D007258 ORTHO05D008852 3.5e-68 262.3 199 66.8
THA.LOC104802980 Tarenaya hassleriana HOM05D007258 ORTHO05D008852 7.9e-68 261.2 191 70.2
Duzib138G1000 Durio zibethinus HOM05D007258 ORTHO05D008852 3.0e-67 259.2 191 67.0
Nitab4.5_0009044g0050 Nicotiana tabacum HOM05D007258 ORTHO05D008852 5.1e-67 258.5 182 72.5
PGSC0003DMG400001370 Solanum tuberosum HOM05D007258 ORTHO05D008852 5.1e-67 258.5 177 72.9
Gorai.001G208500 Gossypium raimondii HOM05D007258 ORTHO05D008852 6.7e-67 258.1 192 67.7
Potri.004G116800 Populus trichocarpa HOM05D007258 ORTHO05D008852 6.7e-67 258.1 197 67.0
Sopen02g033890 Solanum pennellii HOM05D007258 ORTHO05D008852 6.7e-67 258.1 184 72.3
QL02p066408 Quercus lobata HOM05D007258 ORTHO05D008852 8.7e-67 257.7 183 71.6
Hma1.2p1_0069F.1_g037420 Hydrangea macrophylla HOM05D007258 ORTHO05D008852 1.1e-66 257.3 180 72.8
PGR004G1744 Punica granatum HOM05D007258 ORTHO05D008852 1.1e-66 257.3 169 75.1
ECA232G3790 Erigeron canadensis HOM05D007258 ORTHO05D008852 1.9e-66 256.5 186 70.4
Nn4g23475 Nelumbo nucifera HOM05D007258 ORTHO05D008852 1.9e-66 256.5 199 64.3
Aa31LG5G12750 Aethionema arabicum HOM05D007258 ORTHO05D008852 2.5e-66 256.1 199 65.3
Solyc02g089100.3 Solanum lycopersicum HOM05D007258 ORTHO05D008852 2.5e-66 256.1 169 74.6
Lsat_1_v5_gn_4_173160 Lactuca sativa HOM05D007258 ORTHO05D008852 9.6e-66 254.2 182 70.9
TWI34G1392 Tripterygium wilfordii HOM05D007258 ORTHO05D008852 1.3e-65 253.8 194 68.6
Sp3g01290 Schrenkiella parvula HOM05D007258 ORTHO05D008852 1.6e-65 253.4 201 65.2
SGA_v2.0_scaffold148G36428 Striga asiatica HOM05D003455 ORTHO05D004165 2.1e-65 253.1 196 66.8
CARHR076190 Cardamine hirsuta HOM05D007258 ORTHO05D008852 2.8e-65 252.7 190 66.8
Gohir.D07G187600 Gossypium hirsutum HOM05D007258 ORTHO05D008852 2.8e-65 252.7 192 66.7
Carub.0003s0134 Capsella rubella HOM05D007258 ORTHO05D008852 3.7e-65 252.3 190 66.8
AT3G02220 Arabidopsis thaliana HOM05D007258 ORTHO05D008852 4.8e-65 251.9 200 64.0
unitig_32.g11768 Utricularia gibba HOM05D007258 ORTHO05D008852 6.2e-65 251.5 192 65.6
AUR62009496 Chenopodium quinoa HOM05D007258 ORTHO05D008852 8.1e-65 251.1 182 69.8
AL3G11470 Arabidopsis lyrata HOM05D007258 ORTHO05D008852 1.1e-64 250.8 193 66.3
HanXRQChr09g0264921 Helianthus annuus HOM05D007258 ORTHO05D008852 1.4e-64 250.4 187 69.5
Thhalv10021265m.g Eutrema salsugineum HOM05D007258 ORTHO05D008852 5.3e-64 248.4 201 63.7
Rhsim08G0075900 Rhododendron simsii HOM05D007258 ORTHO05D008852 5.3e-64 248.4 183 69.4
Aqoxy3G00517 Aquilegia oxysepala HOM05D007258 ORTHO05D008852 9.0e-64 247.7 168 72.6
BraA05t23151Z Brassica rapa HOM05D007258 ORTHO05D008852 1.2e-63 247.3 193 65.3
C09p75600 Brassica napus HOM05D007258 ORTHO05D008852 1.5e-63 246.9 189 66.1
BolC5t35098H Brassica oleracea HOM05D007258 ORTHO05D008852 1.5e-63 246.9 189 66.1
BcaC05g30335 Brassica carinata HOM05D007258 ORTHO05D008852 2.0e-63 246.5 200 64.5
Sabra04G0070300 Salix brachista HOM05D000830 ORTHO05D008852 2.0e-63 246.5 181 68.0
BcaC05g30334 Brassica carinata HOM05D007258 ORTHO05D008852 4.5e-63 245.4 201 64.2
A05p45100 Brassica napus HOM05D007258 ORTHO05D008852 7.6e-63 244.6 186 66.7
MELO3C022042.2 Cucumis melo HOM05D007258 ORTHO05D008852 7.6e-63 244.6 206 63.6
Hund16216 Selenicereus undatus HOM05D007258 ORTHO05D008852 1.3e-62 243.8 177 71.8
Sc11g0008720 Simmondsia chinensis HOM05D007258 ORTHO05D008852 2.2e-62 243.0 176 69.9
HPP92_001847 Vanilla planifolia HOM05D007258 ORTHO05D008852 3.8e-62 242.3 157 74.5
Haze_03284 Corylus avellana HOM05D007258 ORTHO05D008852 6.5e-62 241.5 167 73.1
CSS0017666 Camellia sinensis var. sinensis HOM05D007258 ORTHO05D008852 8.4e-62 241.1 143 79.7
Prupe.3G250800 Prunus persica HOM05D007258 ORTHO05D008852 1.4e-61 240.4 163 72.4
Cc07_g04400 Coffea canephora HOM05D007258 ORTHO05D008852 2.5e-61 239.6 187 63.6
CsaV3_5G038620 Cucumis sativus L. HOM05D007258 ORTHO05D008852 7.1e-61 238.0 158 75.9
GSVIVG01036568001 Vitis vinifera HOM05D007258 ORTHO05D008852 7.1e-61 238.0 166 70.5
MD17G1063700 Malus domestica HOM05D007258 ORTHO05D008852 1.6e-60 236.9 163 71.2
Os01g0763000 Oryza sativa ssp. japonica HOM05D007258 ORTHO05D008852 1.6e-60 236.9 191 62.3
MSTRG.15441 Avicennia marina HOM05D007258 ORTHO05D008852 1.0e-59 234.2 186 65.6
Cfa010690 Carpinus fangiana HOM05D007258 ORTHO05D008852 2.3e-59 233.0 137 81.0
COL.COLO4_03895 Corchorus olitorius HOM05D007258 ORTHO05D008852 6.7e-59 231.5 138 79.7
Migut.K01261 Erythranthe guttata HOM05D007258 ORTHO05D008852 6.7e-59 231.5 184 62.5
PSO478G0672 Papaver somniferum HOM05D007258 ORTHO05D008852 3.3e-58 229.2 184 64.1
MD17G1063100 Malus domestica HOM05D007258 ORTHO05D008852 1.6e-57 226.9 172 66.9
PSO017G7301 Papaver somniferum HOM05D007258 ORTHO05D008852 2.1e-57 226.5 173 65.3
Sed0003620 Sechium edule HOM05D007258 ORTHO05D008852 2.1e-57 226.5 178 65.7
RcHm_v2.0_Chr2g0165201 Rosa chinensis HOM05D007258 ORTHO05D008852 1.4e-56 223.8 163 68.1
Oeu004419.1 Olea europaea HOM05D007258 ORTHO05D008852 2.4e-56 223.0 142 73.2
Gohir.A07G181100 Gossypium hirsutum HOM05D007258 ORTHO05D008852 9.0e-56 221.1 192 59.9
EL10Ac2g04457 Beta vulgaris HOM05D007258 ORTHO05D008852 2.0e-55 219.9 200 61.0
FvH4_6g46551 Fragaria vesca HOM05D007258 ORTHO05D008852 1.0e-54 217.6 163 66.9
FAN05G4223 Fragaria x ananassa HOM05D000830 ORTHO05D008852 1.0e-54 217.6 163 66.9
Eucgr.L02288 Eucalyptus grandis HOM05D007258 ORTHO05D008852 2.2e-54 216.5 223 56.1
FAN02G1393 Fragaria x ananassa HOM05D000830 ORTHO05D008852 2.9e-54 216.1 163 66.9
Zm00001eb152360 Zea mays HOM05D007258 ORTHO05D008852 1.4e-53 213.8 135 72.6
TAR374G0815 Trochodendron aralioides HOM05D007258 ORTHO05D008852 2.5e-53 213.0 169 65.1
FAN14G1076 Fragaria x ananassa HOM05D000830 ORTHO05D008852 6.1e-52 208.4 176 61.9
Eucgr.I02051 Eucalyptus grandis HOM05D007258 ORTHO05D008852 7.9e-52 208.0 184 63.0
CDE07G1188 Ceratophyllum demersum HOM05D007258 ORTHO05D008852 1.1e-50 204.1 139 70.5
Haze_14398 Corylus avellana HOM05D000041 ORTHO05D000061 4.3e-50 202.2 146 70.5
SEGI_41097 Sequoiadendron giganteum HOM05D007258 ORTHO05D008852 7.4e-50 201.4 194 58.2
MD17G1063300 Malus domestica HOM05D007258 ORTHO05D008852 9.1e-48 194.5 113 77.9
Nitab4.5_0005120g0080 Nicotiana tabacum HOM05D007258 ORTHO05D008852 9.7e-42 174.5 196 53.6
FAN09G2101 Fragaria x ananassa HOM05D000830 ORTHO05D008852 2.2e-41 173.3 140 64.3
Pp3c24_10 Physcomitrium patens HOM05D007258 ORTHO05D008852 8.2e-41 171.4 190 50.0
Actinidia17595 Actinidia chinensis HOM05D007258 ORTHO05D008852 2.4e-40 169.9 148 58.1
MD09G1072600 Malus domestica HOM05D007258 ORTHO05D008852 4.1e-40 169.1 168 53.0
Atru.BG.153.p Acer truncatum HOM05D007258 ORTHO05D008852 2.6e-34 149.8 77 84.4
CDE04G0513 Ceratophyllum demersum HOM05D007258 ORTHO05D008852 1.7e-33 147.1 207 47.8
CBR_g1012 Chara braunii HOM05D007258 ORTHO05D008852 5.3e-32 142.1 138 48.6
AagrBONN_evm.TU.Sc2ySwM_117.3322 Anthoceros agrestis HOM05D007258 ORTHO05D008852 9.4e-29 131.3 149 46.3
ClCG11G004890 Citrullus lanatus HOM05D007258 ORTHO05D008852 3.6e-28 129.4 66 84.8
BcaB03g16148 Brassica carinata HOM05D007258 ORTHO05D008852 1.0e-22 111.3 81 65.4
Lsat_1_v5_gn_4_141000 Lactuca sativa HOM05D007258 ORTHO05D008852 6.8e-19 98.6 63 69.8
SEGI_23358 Sequoiadendron giganteum HOM05D007258 ORTHO05D008852 7.5e-18 95.1 127 51.2
vmacro18138 Vaccinium macrocarpon HOM05D007258 ORTHO05D008852 7.5e-18 95.1 86 62.8
ATR0037G004 Amborella trichopoda HOM05D007258 ORTHO05D008852 9.1e-16 88.2 55 67.3
Lsat_1_v5_gn_7_113001 Lactuca sativa HOM05D007258 ORTHO05D008852 1.6e-15 87.4 62 66.1
Actinidia26259 Actinidia chinensis HOM05D007258 ORTHO05D008852 1.5e-13 80.9 89 56.2
ATR0037G029 Amborella trichopoda HOM05D007258 ORTHO05D008852 1.5e-10 70.9 102 46.1
Migut.I00106 Erythranthe guttata HOM05D007258 ORTHO05D008852 1.6e-07 60.8 37 67.6
MCO01G001 Micromonas commoda HOM05D007258 ORTHO05D008852 1.7e-06 57.4 112 31.2


User provided reference genes

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