Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0017292 Lotus japonicus HOM05D007597 ORTHO05D009608 9.4e-95 350.1 171 100.0
TPR.G36945 Trifolium pratense HOM05D007597 ORTHO05D009608 2.6e-60 235.7 164 75.0
Medtr1g032560 Medicago truncatula HOM05D007597 ORTHO05D009608 3.4e-60 235.3 168 72.6
Psat6g046800 Pisum sativum HOM05D007597 ORTHO05D009608 2.4e-58 229.2 168 72.6
Lalb_Chr10g0095671 Lupinus albus HOM05D007597 ORTHO05D009608 7.8e-57 224.2 175 68.0
Phvul.003G017900 Phaseolus vulgaris HOM05D007597 ORTHO05D009608 3.0e-56 222.2 166 70.5
Glyma.02G085800 Glycine max HOM05D007597 ORTHO05D009608 6.6e-56 221.1 189 66.7
VMungo1215G2214 Vigna mungo HOM05D007597 ORTHO05D009608 2.3e-53 212.6 167 65.9
arahy.Tifrunner.gnm1.ann1.80S20J Arachis hypogaea HOM05D007597 ORTHO05D009608 3.7e-51 205.3 172 64.5
arahy.Tifrunner.gnm1.ann1.FU0M5P Arachis hypogaea HOM05D007597 ORTHO05D009608 1.4e-50 203.4 173 63.6
Duzib251G0764 Durio zibethinus HOM05D007597 ORTHO05D009608 5.8e-44 181.4 167 55.7
Potri.008G135400 Populus trichocarpa HOM05D007597 ORTHO05D009608 4.2e-42 175.3 165 57.0
Cfa015029 Carpinus fangiana HOM05D007597 ORTHO05D009608 1.7e-40 169.9 125 68.0
MD13G1019900 Malus domestica HOM05D007597 ORTHO05D009608 1.7e-40 169.9 178 54.5
CiPaw.06G052900 Carya illinoinensis HOM05D007597 ORTHO05D009608 2.3e-40 169.5 128 65.6
Nn3g20775 Nelumbo nucifera HOM05D007597 ORTHO05D009608 3.0e-40 169.1 167 54.5
QL93p0203_0030 Quercus lobata HOM05D007597 ORTHO05D009608 8.7e-40 167.5 168 55.4
Haze_10869 Corylus avellana HOM05D007597 ORTHO05D009608 1.1e-39 167.2 176 54.5
Sabra08G0103400 Salix brachista HOM05D007597 ORTHO05D009608 2.5e-39 166.0 162 55.6
GSVIVG01011651001 Vitis vinifera HOM05D007597 ORTHO05D009608 5.6e-39 164.9 166 54.2
Dinv07717 Davidia involucrata HOM05D007597 ORTHO05D009608 2.1e-38 162.9 112 71.4
RcHm_v2.0_Chr4g0442791 Rosa chinensis HOM05D007597 ORTHO05D009608 6.2e-38 161.4 169 52.1
Cc11_g07700 Coffea canephora HOM05D007597 ORTHO05D009608 8.1e-38 161.0 161 51.6
FAN17G0527 Fragaria x ananassa HOM05D007597 ORTHO05D009608 1.1e-37 160.6 169 52.7
AUR62037405 Chenopodium quinoa HOM05D007597 ORTHO05D009608 1.4e-37 160.2 134 60.4
Actinidia38436 Actinidia chinensis HOM05D007597 ORTHO05D009608 2.4e-37 159.5 156 55.8
Thecc.02G293900 Theobroma cacao HOM05D007597 ORTHO05D009608 4.0e-37 158.7 168 49.4
FAN12G3867 Fragaria x ananassa HOM05D007597 ORTHO05D009608 5.3e-37 158.3 170 50.6
ClCG07G005520 Citrullus lanatus HOM05D007597 ORTHO05D009608 9.0e-37 157.5 109 67.0
Gohir.A04G143100 Gossypium hirsutum HOM05D007597 ORTHO05D009608 1.5e-36 156.8 163 50.9
FAN22G0955 Fragaria x ananassa HOM05D007597 ORTHO05D009608 2.0e-36 156.4 170 51.2
Atru.chr11.909 Acer truncatum HOM05D007597 ORTHO05D009608 2.6e-36 156.0 129 58.9
FvH4_4g33480 Fragaria vesca HOM05D007597 ORTHO05D009608 3.4e-36 155.6 170 50.6
Rhsim04G0170700 Rhododendron simsii HOM05D007597 ORTHO05D009608 3.4e-36 155.6 126 62.7
TWI53G0585 Tripterygium wilfordii HOM05D007597 ORTHO05D009608 4.4e-36 155.2 169 52.7
Ciclev10016899m.g Citrus clementina HOM05D007597 ORTHO05D009608 5.8e-36 154.8 168 50.0
Cpa.g.sc2.188 Carica papaya HOM05D007597 ORTHO05D009608 1.3e-35 153.7 134 58.2
CSS0036739 Camellia sinensis var. sinensis HOM05D007597 ORTHO05D009608 1.7e-35 153.3 164 53.0
AUR62034992 Chenopodium quinoa HOM05D007597 ORTHO05D009608 1.7e-35 153.3 116 65.5
Gohir.D04G186400 Gossypium hirsutum HOM05D007597 ORTHO05D009608 1.7e-35 153.3 115 62.6
CANSAT01G1232 Cannabis sativa HOM05D007597 ORTHO05D009608 2.9e-35 152.5 127 59.8
Gorai.012G182800 Gossypium raimondii HOM05D007597 ORTHO05D009608 2.9e-35 152.5 164 49.4
HanXRQChr17g0550621 Helianthus annuus HOM05D007597 ORTHO05D009608 3.8e-35 152.1 136 59.6
Lsat_1_v5_gn_1_105200 Lactuca sativa HOM05D007597 ORTHO05D009608 4.9e-35 151.8 160 52.5
Prupe.1G334100 Prunus persica HOM05D007597 ORTHO05D009608 4.9e-35 151.8 96 72.9
vmacro08570 Vaccinium macrocarpon HOM05D007597 ORTHO05D009608 4.9e-35 151.8 143 56.6
Aqoxy1G03694 Aquilegia oxysepala HOM05D007597 ORTHO05D009608 1.4e-34 150.2 162 51.2
Peaxi162Scf00937g00322 Petunia axillaris HOM05D007597 ORTHO05D009608 2.4e-34 149.4 149 53.7
EL10Ac1g02363 Beta vulgaris HOM05D007597 ORTHO05D009608 5.4e-34 148.3 121 61.2
Eucgr.G02097 Eucalyptus grandis HOM05D007597 ORTHO05D009608 5.4e-34 148.3 177 46.9
PGR142G2235 Punica granatum HOM05D007597 ORTHO05D009608 1.2e-33 147.1 136 58.8
ECA246G4875 Erigeron canadensis HOM05D007597 ORTHO05D009608 2.1e-33 146.4 111 68.5
DCAR_030495 Daucus carota HOM05D007597 ORTHO05D009608 2.3e-32 142.9 170 45.3
MELO3C016661.2 Cucumis melo HOM05D007597 ORTHO05D009608 1.1e-31 140.6 156 50.6
Thhalv10004999m.g Eutrema salsugineum HOM05D007597 ORTHO05D009608 3.3e-31 139.0 118 57.6
THA.LOC104824124 Tarenaya hassleriana HOM05D007597 ORTHO05D009608 3.3e-31 139.0 115 55.7
AT2G01755 Arabidopsis thaliana HOM05D007597 ORTHO05D009608 4.3e-31 138.7 117 56.4
PGSC0003DMG400026859 Solanum tuberosum HOM05D007597 ORTHO05D009608 4.3e-31 138.7 93 71.0
MSTRG.13629 Avicennia marina HOM05D007597 ORTHO05D009608 7.3e-31 137.9 175 44.0
Aa31LG2G8130 Aethionema arabicum HOM05D007597 ORTHO05D009608 9.6e-31 137.5 118 55.9
C07p32430 Brassica napus HOM05D007597 ORTHO05D009608 1.3e-30 137.1 115 59.1
BcaC06g34122 Brassica carinata HOM05D007597 ORTHO05D009608 1.6e-30 136.7 115 59.1
BolC7t43776H Brassica oleracea HOM05D007597 ORTHO05D009608 1.6e-30 136.7 115 59.1
Sp2g13210 Schrenkiella parvula HOM05D007597 ORTHO05D009608 2.1e-30 136.3 113 60.2
PSO478G0215 Papaver somniferum HOM05D007597 ORTHO05D009608 2.8e-30 136.0 128 56.2
A06p44080 Brassica napus HOM05D007597 ORTHO05D009608 4.8e-30 135.2 115 59.1
BraA06t27282Z Brassica rapa HOM05D007597 ORTHO05D009608 4.8e-30 135.2 115 59.1
PSO017G5208 Papaver somniferum HOM05D007597 ORTHO05D009608 4.8e-30 135.2 162 46.3
SalBow2G2924 Salvia bowleyana HOM05D007597 ORTHO05D009608 6.2e-30 134.8 162 41.4
Solyc03g006540.3 Solanum lycopersicum HOM05D007597 ORTHO05D009608 8.1e-30 134.4 93 68.8
BcaC06g31279 Brassica carinata HOM05D007597 ORTHO05D009608 1.4e-29 133.7 150 49.3
ATR0118G012 Amborella trichopoda HOM05D007597 ORTHO05D009608 1.8e-29 133.3 124 56.5
CARHR144330 Cardamine hirsuta HOM05D007597 ORTHO05D009608 2.4e-29 132.9 151 47.7
AL5G10880 Arabidopsis lyrata HOM05D007597 ORTHO05D009608 3.1e-29 132.5 110 59.1
Zm00001eb216220 Zea mays HOM05D007597 ORTHO05D009608 6.9e-29 131.3 116 54.3
Lj6P736T27 Lonicera japonica HOM05D007597 ORTHO05D009608 1.5e-28 130.2 92 65.2
CSS0009732 Camellia sinensis var. sinensis HOM05D007597 ORTHO05D009608 5.8e-28 128.3 86 70.9
Os03g0713200 Oryza sativa ssp. japonica HOM05D007597 ORTHO05D009608 2.4e-26 122.9 96 58.3
Migut.E00488 Erythranthe guttata HOM05D007597 ORTHO05D009608 4.2e-26 122.1 96 63.5
Sopen03g002540 Solanum pennellii HOM05D007597 ORTHO05D009608 5.4e-26 121.7 81 70.4
Oeu031613.1 Olea europaea HOM05D007597 ORTHO05D009608 2.1e-25 119.8 88 61.4
Glyma.07G171100 Glycine max HOM05D007597 ORTHO05D009608 1.1e-23 114.0 100 62.0
Carub.0005s0071 Capsella rubella HOM05D007597 ORTHO05D009608 4.3e-23 112.1 91 58.2
Sed0011475 Sechium edule HOM05D007597 ORTHO05D009608 1.3e-22 110.5 128 51.6
AagrBONN_evm.TU.Sc2ySwM_228.3100 Anthoceros agrestis HOM05D007597 ORTHO05D009608 7.1e-18 94.7 87 47.1
COL.COLO4_16605 Corchorus olitorius HOM05D007597 ORTHO05D009608 7.1e-18 94.7 75 60.0
CBR_g61471 Chara braunii HOM05D007597 ORTHO05D009608 4.6e-17 92.0 93 48.4
Pp3c16_25200 Physcomitrium patens HOM05D007597 ORTHO05D009608 1.9e-15 86.7 95 43.2
QL03p036112 Quercus lobata HOM05D007597 ORTHO05D009608 7.4e-15 84.7 118 44.1
TAR371G0144 Trochodendron aralioides HOM05D007597 ORTHO05D009608 2.0e-12 76.6 84 48.8
Nitab4.5_0006778g0040 Nicotiana tabacum HOM05D007597 ORTHO05D009608 7.6e-12 74.7 70 57.1
Nitab4.5_0000241g0020 Nicotiana tabacum HOM05D007597 ORTHO05D009608 2.1e-09 66.6 45 75.6
FAN07G1480 Fragaria x ananassa HOM05D007597 ORTHO05D009608 3.5e-09 65.9 62 54.8
FAN07G2660 Fragaria x ananassa HOM05D007597 ORTHO05D009608 3.5e-09 65.9 62 54.8
SMO115G0274 Selaginella moellendorffii HOM05D007597 ORTHO05D009608 6.7e-08 61.6 89 37.1
Manes.17G084450 Manihot esculenta HOM05D007597 ORTHO05D000073 1.5e-07 60.5 103 41.7


User provided reference genes

Program Settings