Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0017226 Lotus japonicus HOM05D003173 ORTHO05D003546 1.1e-90 336.7 171 100.0
Glyma.11G081300 Glycine max HOM05D003173 ORTHO05D003546 9.9e-36 154.1 176 60.8
TPR.G25094 Trifolium pratense HOM05D003173 ORTHO05D003546 1.1e-31 140.6 178 52.8
Psat2g151840 Pisum sativum HOM05D003173 ORTHO05D003546 1.6e-30 136.7 174 49.4
Medtr8g074760 Medicago truncatula HOM05D003173 ORTHO05D003546 2.1e-30 136.3 177 54.8
VMungo1215G2410 Vigna mungo HOM05D003173 ORTHO05D003546 6.2e-30 134.8 174 52.9
Ca_24945_v3 Cicer arietinum L. HOM05D000001 ORTHO05D000003 3.1e-29 132.5 173 50.3
TPR.G32014 Trifolium pratense HOM05D003173 ORTHO05D003546 4.0e-29 132.1 177 53.1
arahy.Tifrunner.gnm1.ann1.L00MPK Arachis hypogaea HOM05D003173 ORTHO05D003546 6.9e-29 131.3 186 48.4
Lalb_Chr05g0229691 Lupinus albus HOM05D003173 ORTHO05D003546 6.9e-29 131.3 186 50.5
Lj4g0000766 Lotus japonicus HOM05D003173 ORTHO05D003546 3.2e-26 122.5 181 48.6
Medtr5g023030 Medicago truncatula HOM05D003173 ORTHO05D003546 5.4e-26 121.7 173 48.0
Phvul.002G104300 Phaseolus vulgaris HOM05D003173 ORTHO05D003546 9.3e-26 120.9 177 50.3
Lj4g0015450 Lotus japonicus HOM05D003173 ORTHO05D003546 1.0e-24 117.5 182 50.0
Phvul.003G267350 Phaseolus vulgaris HOM05D003173 ORTHO05D003546 1.1e-23 114.0 177 46.9
Glyma.02G043800 Glycine max HOM05D003173 ORTHO05D003546 4.3e-23 112.1 180 49.4
VMungo0251G0852 Vigna mungo HOM05D003173 ORTHO05D003546 1.4e-21 107.1 181 44.2
COL.COLO4_22498 Corchorus olitorius HOM05D003173 ORTHO05D003546 3.4e-12 75.9 160 40.0
TWI73G0798 Tripterygium wilfordii HOM05D003173 ORTHO05D003546 7.6e-12 74.7 170 37.1
Cfa014008 Carpinus fangiana HOM05D003173 ORTHO05D003546 2.9e-11 72.8 191 34.0
FAN28G2348 Fragaria x ananassa HOM05D003173 ORTHO05D003546 2.9e-11 72.8 179 37.4
MBI09_g01020_MAGBIO Magnolia biondii HOM05D003173 ORTHO05D003546 3.8e-11 72.4 186 34.9
TAR376G0945 Trochodendron aralioides HOM05D003173 ORTHO05D003546 5.0e-11 72.0 189 33.9
FAN19G2722 Fragaria x ananassa HOM05D003173 ORTHO05D003546 6.5e-11 71.6 174 34.5
Prupe.7G175300 Prunus persica HOM05D003173 ORTHO05D003546 6.5e-11 71.6 168 33.9
CiPaw.07G063500 Carya illinoinensis HOM05D003173 ORTHO05D003546 8.4e-11 71.2 187 32.6
FvH4_1g11060 Fragaria vesca HOM05D003173 ORTHO05D003546 8.4e-11 71.2 174 34.5
CiPaw.07G143600 Carya illinoinensis HOM05D003173 ORTHO05D003546 1.4e-10 70.5 192 33.3
Manes.02G110500 Manihot esculenta HOM05D003173 ORTHO05D003546 3.2e-10 69.3 180 36.1
Cfa007032 Carpinus fangiana HOM05D003173 ORTHO05D003546 4.2e-10 68.9 182 34.6
ClCG05G015410 Citrullus lanatus HOM05D003173 ORTHO05D003546 4.2e-10 68.9 180 33.9
Manes.18G009300 Manihot esculenta HOM05D003173 ORTHO05D003546 4.2e-10 68.9 193 31.6
Nn6g31907 Nelumbo nucifera HOM05D003173 ORTHO05D003546 4.2e-10 68.9 127 40.9
QL02p012938 Quercus lobata HOM05D003173 ORTHO05D003546 5.5e-10 68.6 197 31.5
Gorai.008G061700 Gossypium raimondii HOM05D003173 ORTHO05D003546 7.1e-10 68.2 125 40.8
PGR102G2057 Punica granatum HOM05D003173 ORTHO05D003546 7.1e-10 68.2 179 36.3
Duzib264G0532 Durio zibethinus HOM05D003173 ORTHO05D003546 1.2e-09 67.4 157 36.3
Eucgr.J02492 Eucalyptus grandis HOM05D003173 ORTHO05D003546 1.6e-09 67.0 179 35.8
Haze_22703 Corylus avellana HOM05D003173 ORTHO05D003546 2.1e-09 66.6 195 32.8
Gohir.A12G058500 Gossypium hirsutum HOM05D003173 ORTHO05D003546 2.1e-09 66.6 163 35.6
Gohir.D12G058500 Gossypium hirsutum HOM05D003173 ORTHO05D003546 2.1e-09 66.6 125 40.0
Oeu026120.1 Olea europaea HOM05D003173 ORTHO05D003546 2.1e-09 66.6 171 35.1
Potri.005G107500 Populus trichocarpa HOM05D003173 ORTHO05D003546 2.1e-09 66.6 167 32.3
Actinidia29769 Actinidia chinensis HOM05D000228 ORTHO05D001545 2.7e-09 66.2 173 35.8
Potri.002G016500 Populus trichocarpa HOM05D003173 ORTHO05D003546 2.7e-09 66.2 132 37.1
Thecc.01G011100 Theobroma cacao HOM05D003173 ORTHO05D003546 2.7e-09 66.2 170 33.5
Duzib093G0730 Durio zibethinus HOM05D003173 ORTHO05D003546 3.5e-09 65.9 125 36.0
TAR628G1607 Trochodendron aralioides HOM05D003173 ORTHO05D003546 4.6e-09 65.5 185 32.4
Aqoxy6G01958 Aquilegia oxysepala HOM05D003173 ORTHO05D003546 6.1e-09 65.1 128 38.3
CSS0028811 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 6.1e-09 65.1 187 31.6
TAR381G1677 Trochodendron aralioides HOM05D003173 ORTHO05D003546 6.1e-09 65.1 189 32.8
Glyma.17G261300 Glycine max HOM05D003173 ORTHO05D003546 1.0e-08 64.3 162 32.1
Sabra02G0013200 Salix brachista HOM05D003173 ORTHO05D003546 1.8e-08 63.5 128 38.3
Thecc.08G051800 Theobroma cacao HOM05D003173 ORTHO05D003546 1.8e-08 63.5 188 31.9
Duzib116G0616 Durio zibethinus HOM05D003173 ORTHO05D003546 2.3e-08 63.2 190 31.6
Gohir.D05G257500 Gossypium hirsutum HOM05D003173 ORTHO05D003546 2.3e-08 63.2 129 36.4
Gorai.009G268900 Gossypium raimondii HOM05D003173 ORTHO05D003546 2.3e-08 63.2 129 36.4
Actinidia37954 Actinidia chinensis HOM05D003173 ORTHO05D003546 3.0e-08 62.8 161 36.0
COL.COLO4_26083 Corchorus olitorius HOM05D003173 ORTHO05D003546 3.0e-08 62.8 168 35.1
Glyma.14G222400 Glycine max HOM05D003173 ORTHO05D003546 3.0e-08 62.8 179 31.3
CSS0021479 Camellia sinensis var. sinensis HOM05D003173 ORTHO05D003546 3.9e-08 62.4 187 31.0
Gohir.A05G255800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 3.9e-08 62.4 129 35.7
CiPaw.08G069200 Carya illinoinensis HOM05D003173 ORTHO05D003546 5.1e-08 62.0 133 38.3
MELO3C003727.2 Cucumis melo HOM05D003173 ORTHO05D003546 5.1e-08 62.0 179 33.0
Potri.005G245600 Populus trichocarpa HOM05D003173 ORTHO05D003546 6.7e-08 61.6 128 37.5
VMungo1309G1265 Vigna mungo HOM05D003173 ORTHO05D003546 1.1e-07 60.8 167 32.3
Cpa.g.sc26.264 Carica papaya HOM05D003173 ORTHO05D003546 2.5e-07 59.7 175 33.1
CsaV3_3G046130 Cucumis sativus L. HOM05D003173 ORTHO05D003546 2.5e-07 59.7 162 33.3
FvH4_2g37950 Fragaria vesca HOM05D003173 ORTHO05D003546 2.5e-07 59.7 193 32.6
FAN20G0850 Fragaria x ananassa HOM05D003173 ORTHO05D003546 3.3e-07 59.3 185 32.4
Gohir.A05G182800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 3.3e-07 59.3 180 35.0
Gohir.D05G185800 Gossypium hirsutum HOM05D003173 ORTHO05D003546 3.3e-07 59.3 180 35.0
Gorai.009G191200 Gossypium raimondii HOM05D003173 ORTHO05D003546 3.3e-07 59.3 180 35.0
Actinidia15462 Actinidia chinensis HOM05D003173 ORTHO05D003546 4.3e-07 58.9 179 31.3
Ciclev10027470m.g Citrus clementina HOM05D003173 ORTHO05D003546 4.3e-07 58.9 176 33.5
PSO541G5041 Papaver somniferum HOM05D003173 ORTHO05D003546 4.3e-07 58.9 132 37.1
Haze_03701 Corylus avellana HOM05D003173 ORTHO05D003546 7.4e-07 58.2 137 37.2
FAN15G3480 Fragaria x ananassa HOM05D003173 ORTHO05D003546 7.4e-07 58.2 187 33.2
Dinv39556 Davidia involucrata HOM05D003173 ORTHO05D003546 9.7e-07 57.8 179 30.7
Medtr3g114750 Medicago truncatula HOM05D003173 ORTHO05D003546 9.7e-07 57.8 125 36.0
FAN27G2702 Fragaria x ananassa HOM05D003173 ORTHO05D003546 1.3e-06 57.4 186 32.3
Phvul.009G019900 Phaseolus vulgaris HOM05D003173 ORTHO05D003546 1.3e-06 57.4 191 30.9
RcHm_v2.0_Chr6g0303671 Rosa chinensis HOM05D003173 ORTHO05D003546 1.6e-06 57.0 176 33.5
Migut.N03186 Erythranthe guttata HOM05D003173 ORTHO05D003546 2.2e-06 56.6 134 35.1
Glyma.06G020800 Glycine max HOM05D003173 ORTHO05D003546 2.2e-06 56.6 170 31.2
Rhsim06G0012200 Rhododendron simsii HOM05D003173 ORTHO05D003546 2.2e-06 56.6 182 32.4
Manes.05G142500 Manihot esculenta HOM05D003173 ORTHO05D003546 2.8e-06 56.2 190 30.5
EL10Ac1g02082 Beta vulgaris HOM05D003173 ORTHO05D003546 3.7e-06 55.8 140 35.0
MSTRG.24229 Avicennia marina HOM05D003173 ORTHO05D003546 4.8e-06 55.5 137 34.3
Sp1g18040 Schrenkiella parvula HOM05D003173 ORTHO05D003546 4.8e-06 55.5 128 31.2
CANSAT25G0622 Cannabis sativa HOM05D003173 ORTHO05D003546 6.3e-06 55.1 169 32.0
Prupe.1G359400 Prunus persica HOM05D003173 ORTHO05D003546 6.3e-06 55.1 134 35.8
CDE05G3154 Ceratophyllum demersum HOM05D001535 ORTHO05D003710 8.2e-06 54.7 175 29.7
Medtr1g026110 Medicago truncatula HOM05D003173 ORTHO05D003546 8.2e-06 54.7 125 35.2
Psat6g001080 Pisum sativum HOM05D003173 ORTHO05D003546 8.2e-06 54.7 125 34.4


User provided reference genes

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