Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0017100 Lotus japonicus HOM05D007813 ORTHO05D009861 2.4e-52 209.1 158 100.0
Psat4g167360 Pisum sativum HOM05D007813 ORTHO05D009861 8.3e-21 104.4 150 48.0
Glyma.09G285400 Glycine max HOM05D007813 ORTHO05D009861 2.1e-16 89.7 145 47.6
Medtr8g022020 Medicago truncatula HOM05D007813 ORTHO05D009861 2.1e-16 89.7 149 52.3
Manes.11G001000 Manihot esculenta HOM05D007813 ORTHO05D009861 6.8e-15 84.7 131 44.3
Lalb_Chr04g0259041 Lupinus albus HOM05D007813 ORTHO05D009861 8.9e-15 84.3 155 41.9
Sed0004061 Sechium edule HOM05D007813 ORTHO05D009861 1.5e-14 83.6 161 41.6
ClCG01G008030 Citrullus lanatus HOM05D007813 ORTHO05D009861 2.9e-13 79.3 164 37.8
Oeu039115.1 Olea europaea HOM05D007813 ORTHO05D009861 3.7e-13 79.0 154 38.3
CsaV3_5G021820 Cucumis sativus L. HOM05D007813 ORTHO05D009861 4.9e-13 78.6 156 36.5
Aa31LG4G9500 Aethionema arabicum HOM05D007813 ORTHO05D009861 6.4e-13 78.2 127 39.4
Cpa.g.sc30.28 Carica papaya HOM05D007813 ORTHO05D009861 6.4e-13 78.2 149 39.6
Ca_23410_v3 Cicer arietinum L. HOM05D007813 ORTHO05D009861 6.4e-13 78.2 127 44.9
QL01p000818 Quercus lobata HOM05D007813 ORTHO05D009861 8.3e-13 77.8 136 48.5
Atru.chr11.1262 Acer truncatum HOM05D007813 ORTHO05D009861 1.9e-12 76.6 152 36.8
Actinidia04359 Actinidia chinensis HOM05D007813 ORTHO05D009861 1.9e-12 76.6 168 37.5
Ciclev10032850m.g Citrus clementina HOM05D007813 ORTHO05D009861 3.2e-12 75.9 145 40.7
SGA_v2.0_scaffold5G02767 Striga asiatica HOM05D007813 ORTHO05D009861 3.2e-12 75.9 124 46.0
Prupe.1G350000 Prunus persica HOM05D007813 ORTHO05D009861 5.4e-12 75.1 158 38.6
Cc11_g01070 Coffea canephora HOM05D007813 ORTHO05D009861 9.2e-12 74.3 161 36.6
Nn3g16575 Nelumbo nucifera HOM05D007813 ORTHO05D009861 1.2e-11 73.9 159 44.0
MSTRG.2075 Avicennia marina HOM05D007813 ORTHO05D009861 2.1e-11 73.2 159 40.3
HanXRQChr11g0332791 Helianthus annuus HOM05D007813 ORTHO05D009861 2.1e-11 73.2 140 37.1
BraA01t01511Z Brassica rapa HOM05D007813 ORTHO05D009861 2.7e-11 72.8 140 40.7
Haze_17409 Corylus avellana HOM05D001339 ORTHO05D003609 2.7e-11 72.8 132 37.1
Peaxi162Scf00643g00047 Petunia axillaris HOM05D007813 ORTHO05D009861 3.5e-11 72.4 153 37.3
Duzib248G1033 Durio zibethinus HOM05D007813 ORTHO05D009861 4.6e-11 72.0 179 33.0
RcHm_v2.0_Chr4g0447031 Rosa chinensis HOM05D007813 ORTHO05D009861 6.0e-11 71.6 140 54.3
FAN07G2714 Fragaria x ananassa HOM05D007813 ORTHO05D009861 1.0e-10 70.9 139 38.8
Sabra07G0000100 Salix brachista HOM05D007813 ORTHO05D009861 1.3e-10 70.5 146 37.0
TPR.G29991 Trifolium pratense HOM05D007813 ORTHO05D009861 1.3e-10 70.5 130 40.0
C01p19700 Brassica napus HOM05D007813 ORTHO05D009861 1.7e-10 70.1 140 38.6
BolC1t01897H Brassica oleracea HOM05D007813 ORTHO05D009861 1.7e-10 70.1 140 38.6
Lsat_1_v5_gn_6_66140 Lactuca sativa HOM05D007813 ORTHO05D009861 1.7e-10 70.1 149 34.2
Nitab4.5_0000146g0130 Nicotiana tabacum HOM05D007813 ORTHO05D009861 1.7e-10 70.1 121 39.7
MELO3C005074.2 Cucumis melo HOM05D007813 ORTHO05D009861 2.3e-10 69.7 166 32.5
Dinv01363 Davidia involucrata HOM05D007813 ORTHO05D009861 2.3e-10 69.7 131 42.0
ECA233G3331 Erigeron canadensis HOM05D007813 ORTHO05D009861 2.3e-10 69.7 137 40.1
FvH4_4g37240 Fragaria vesca HOM05D007813 ORTHO05D009861 2.3e-10 69.7 161 37.9
COL.COLO4_33123 Corchorus olitorius HOM05D007813 ORTHO05D009861 3.0e-10 69.3 173 32.9
PSO675G5803 Papaver somniferum HOM05D007813 ORTHO05D009861 3.0e-10 69.3 156 35.3
A01p15750 Brassica napus HOM05D007813 ORTHO05D009861 3.9e-10 68.9 140 39.3
PSO717G0067 Papaver somniferum HOM05D007813 ORTHO05D009861 3.9e-10 68.9 154 37.7
CiPaw.16G001800 Carya illinoinensis HOM05D007813 ORTHO05D009861 5.1e-10 68.6 158 48.1
CDE02G1922 Ceratophyllum demersum HOM05D000644 ORTHO05D000504 5.1e-10 68.6 149 34.2
Carub.0007s1668 Capsella rubella HOM05D007813 ORTHO05D009861 6.6e-10 68.2 142 36.6
PGSC0003DMG400031169 Solanum tuberosum HOM05D007813 ORTHO05D009861 6.6e-10 68.2 133 47.4
CARHR231780 Cardamine hirsuta HOM05D007813 ORTHO05D009861 8.6e-10 67.8 150 35.3
FAN17G2972 Fragaria x ananassa HOM05D007813 ORTHO05D009861 8.6e-10 67.8 140 37.9
Sopen01g035700 Solanum pennellii HOM05D007813 ORTHO05D009861 8.6e-10 67.8 130 48.5
AT4G24370 Arabidopsis thaliana HOM05D007813 ORTHO05D009861 1.1e-09 67.4 140 37.9
TWI53G2082 Tripterygium wilfordii HOM05D007813 ORTHO05D009861 1.1e-09 67.4 150 34.7
Gohir.D02G190500 Gossypium hirsutum HOM05D007813 ORTHO05D009861 1.5e-09 67.0 179 30.7
Sc06g0009980 Simmondsia chinensis HOM05D007813 ORTHO05D009861 1.5e-09 67.0 141 36.2
EL10Ac9g22652 Beta vulgaris HOM05D000001 ORTHO05D000003 1.9e-09 66.6 159 34.0
Gorai.005G213200 Gossypium raimondii HOM05D007813 ORTHO05D009861 1.9e-09 66.6 179 30.7
Sp7g22350 Schrenkiella parvula HOM05D007813 ORTHO05D009861 1.9e-09 66.6 146 44.5
CANSAT78G1292 Cannabis sativa HOM05D007813 ORTHO05D009861 2.5e-09 66.2 156 34.0
Thhalv10026382m.g Eutrema salsugineum HOM05D007813 ORTHO05D009861 2.5e-09 66.2 139 35.3
Gohir.A03G167400 Gossypium hirsutum HOM05D007813 ORTHO05D009861 2.5e-09 66.2 179 30.2
MD13G1002400 Malus domestica HOM05D007813 ORTHO05D009861 2.5e-09 66.2 140 47.1
AL7G28850 Arabidopsis lyrata HOM05D007813 ORTHO05D009861 4.3e-09 65.5 147 36.1
RhsimUnG0102800 Rhododendron simsii HOM05D007813 ORTHO05D009861 4.3e-09 65.5 134 36.6
unitig_699.g19640 Utricularia gibba HOM05D007813 ORTHO05D009861 4.3e-09 65.5 144 37.5
Hund21950 Selenicereus undatus HOM05D007813 ORTHO05D009861 9.5e-09 64.3 171 32.7
Thecc.02G153800 Theobroma cacao HOM05D007813 ORTHO05D009861 1.6e-08 63.5 175 31.4
Ah.01g003370 Amaranthus hybridus HOM05D007813 ORTHO05D009861 2.1e-08 63.2 164 34.1
Aqoxy7G00887 Aquilegia oxysepala HOM05D007813 ORTHO05D009861 4.7e-08 62.0 142 33.8
DCAR_023485 Daucus carota HOM05D007813 ORTHO05D009861 6.2e-08 61.6 161 32.9
TAR374G1573 Trochodendron aralioides HOM05D007813 ORTHO05D009861 1.8e-07 60.1 164 32.3
Nitab4.5_0003448g0030 Nicotiana tabacum HOM05D007813 ORTHO05D009861 8.9e-07 57.8 124 45.2
AUR62029135 Chenopodium quinoa HOM05D007813 ORTHO05D009861 1.2e-06 57.4 96 42.7
Nitab4.5_0008487g0020 Nicotiana tabacum HOM05D007813 ORTHO05D009861 3.4e-06 55.8 124 42.7
AUR62014985 Chenopodium quinoa HOM05D007813 ORTHO05D009861 4.4e-06 55.5 103 40.8
HPP92_002530 Vanilla planifolia HOM05D007813 ORTHO05D009861 5.8e-06 55.1 151 31.1


User provided reference genes

Program Settings