Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0017011 Lotus japonicus HOM05D006447 ORTHO05D007938 9.2e-119 430.3 219 100.0
Glyma.01G004700 Glycine max HOM05D006447 ORTHO05D007938 5.2e-106 387.9 219 89.0
Ca_16628_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 1.1e-103 380.2 219 87.2
Lalb_Chr22g0349841 Lupinus albus HOM05D006447 ORTHO05D007938 1.1e-103 380.2 219 86.3
TPR.G26948 Trifolium pratense HOM05D006447 ORTHO05D007938 9.2e-103 377.1 219 86.3
Medtr6g090585 Medicago truncatula HOM05D006447 ORTHO05D007938 5.1e-101 371.3 219 84.0
Phvul.004G173200 Phaseolus vulgaris HOM05D006447 ORTHO05D007938 5.1e-101 371.3 220 85.0
VMungo0464G1544 Vigna mungo HOM05D006447 ORTHO05D007938 5.6e-100 367.9 220 84.5
arahy.Tifrunner.gnm1.ann1.2E9KT7 Arachis hypogaea HOM05D006447 ORTHO05D007938 9.5e-100 367.1 247 77.3
arahy.Tifrunner.gnm1.ann1.D97E3U Arachis hypogaea HOM05D006447 ORTHO05D007938 9.5e-100 367.1 247 77.3
CsaV3_1G040040 Cucumis sativus L. HOM05D006447 ORTHO05D007938 5.2e-98 361.3 219 82.2
Sed0005705 Sechium edule HOM05D006447 ORTHO05D007938 3.7e-96 355.1 219 81.3
Ca_25608_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 4.9e-96 354.8 204 86.3
Ciclev10009402m.g Citrus clementina HOM05D006447 ORTHO05D007938 1.1e-95 353.6 218 79.8
Sabra18G0061100 Salix brachista HOM05D006447 ORTHO05D007938 7.1e-95 350.9 219 78.1
Prupe.7G215800 Prunus persica HOM05D006447 ORTHO05D007938 1.6e-94 349.7 219 78.5
Gorai.001G010200 Gossypium raimondii HOM05D006447 ORTHO05D007938 3.5e-94 348.6 217 77.9
Manes.03G029700 Manihot esculenta HOM05D006447 ORTHO05D007938 6.0e-94 347.8 207 81.6
ECA234G4260 Erigeron canadensis HOM05D006447 ORTHO05D007938 3.9e-93 345.1 212 79.7
MD15G1201700 Malus domestica HOM05D006447 ORTHO05D007938 3.9e-93 345.1 216 78.2
Potri.018G069800 Populus trichocarpa HOM05D006447 ORTHO05D007938 3.9e-93 345.1 219 77.2
PGR142G0783 Punica granatum HOM05D006447 ORTHO05D007938 5.1e-93 344.7 208 81.2
Gohir.A07G009600 Gossypium hirsutum HOM05D006447 ORTHO05D007938 8.6e-93 344.0 217 76.5
QL02p040054 Quercus lobata HOM05D006447 ORTHO05D007938 2.5e-92 342.4 218 78.4
Cfa003143 Carpinus fangiana HOM05D006447 ORTHO05D007938 3.3e-92 342.0 219 77.6
RcHm_v2.0_Chr2g0092441 Rosa chinensis HOM05D006447 ORTHO05D007938 4.3e-92 341.7 219 77.6
Actinidia39754 Actinidia chinensis HOM05D006447 ORTHO05D007938 5.6e-92 341.3 219 79.0
Peaxi162Scf00498g00029 Petunia axillaris HOM05D006447 ORTHO05D007938 7.3e-92 340.9 215 79.1
CAN.G1241.6 Capsicum annuum HOM05D006447 ORTHO05D007938 9.6e-92 340.5 217 78.3
DCAR_031970 Daucus carota HOM05D006447 ORTHO05D007938 1.2e-91 340.1 218 78.0
Nitab4.5_0000540g0030 Nicotiana tabacum HOM05D006447 ORTHO05D007938 1.2e-91 340.1 212 79.2
CSS0014749 Camellia sinensis var. sinensis HOM05D006447 ORTHO05D007938 1.6e-91 339.7 211 80.1
Migut.K00568 Erythranthe guttata HOM05D006447 ORTHO05D007938 2.1e-91 339.3 218 77.5
Eucgr.C00935 Eucalyptus grandis HOM05D006447 ORTHO05D007938 2.1e-91 339.3 208 79.8
HanXRQChr10g0319031 Helianthus annuus HOM05D006447 ORTHO05D007938 2.1e-91 339.3 218 77.1
Cpa.g.sc229.2 Carica papaya HOM05D006447 ORTHO05D007938 3.6e-91 338.6 218 77.1
DCAR_024680 Daucus carota HOM05D006447 ORTHO05D007938 4.7e-91 338.2 217 77.9
FvH4_1g06700 Fragaria vesca HOM05D006447 ORTHO05D007938 4.7e-91 338.2 219 77.2
FAN26G2507 Fragaria x ananassa HOM05D006447 ORTHO05D007938 6.2e-91 337.8 219 77.2
Lsat_1_v5_gn_5_146261 Lactuca sativa HOM05D006447 ORTHO05D007938 8.1e-91 337.4 219 77.6
Sopen12g003620 Solanum pennellii HOM05D006447 ORTHO05D007938 1.8e-90 336.3 218 77.1
TAR626G0126 Trochodendron aralioides HOM05D006447 ORTHO05D007938 3.1e-90 335.5 219 76.7
TAR626G0261 Trochodendron aralioides HOM05D006447 ORTHO05D007938 3.1e-90 335.5 219 76.7
AUR62030454 Chenopodium quinoa HOM05D006447 ORTHO05D007938 6.8e-90 334.3 208 77.9
TAR728G0001 Trochodendron aralioides HOM05D006447 ORTHO05D007938 6.8e-90 334.3 219 76.7
CARHR236900 Cardamine hirsuta HOM05D006447 ORTHO05D007938 8.9e-90 334.0 218 76.1
Sc18g0001690 Simmondsia chinensis HOM05D006447 ORTHO05D007938 1.5e-89 333.2 218 75.2
Sc18g0001740 Simmondsia chinensis HOM05D006447 ORTHO05D007938 1.5e-89 333.2 218 75.2
EL10Ac5g12560 Beta vulgaris HOM05D006447 ORTHO05D007938 2.6e-89 332.4 214 76.6
Thhalv10026148m.g Eutrema salsugineum HOM05D006447 ORTHO05D007938 3.4e-89 332.0 218 74.8
Aa31LG2G21480 Aethionema arabicum HOM05D006447 ORTHO05D007938 5.8e-89 331.3 217 75.6
Carub.0007s1142 Capsella rubella HOM05D006447 ORTHO05D007938 5.8e-89 331.3 209 78.5
THA.LOC104814578 Tarenaya hassleriana HOM05D006447 ORTHO05D007938 5.8e-89 331.3 218 75.7
AT4G29170 Arabidopsis thaliana HOM05D006447 ORTHO05D007938 1.3e-88 330.1 209 78.0
BraA03t14939Z Brassica rapa HOM05D006447 ORTHO05D007938 1.3e-88 330.1 209 78.5
Eucgr.C00941 Eucalyptus grandis HOM05D006447 ORTHO05D007938 2.2e-88 329.3 210 78.1
BcaNung00456 Brassica carinata HOM05D006447 ORTHO05D007938 2.9e-88 328.9 209 78.0
BolC7t46152H Brassica oleracea HOM05D006447 ORTHO05D007938 2.9e-88 328.9 209 78.0
Nitab4.5_0003781g0070 Nicotiana tabacum HOM05D006447 ORTHO05D007938 4.9e-88 328.2 204 78.4
SalBow1G2756 Salvia bowleyana HOM05D006447 ORTHO05D007938 4.9e-88 328.2 219 76.7
SalBow1G3435 Salvia bowleyana HOM05D006447 ORTHO05D007938 4.9e-88 328.2 219 76.7
Aqoxy7G01349 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 1.1e-87 327.0 207 75.8
Hund14295 Selenicereus undatus HOM05D006447 ORTHO05D007938 1.1e-87 327.0 217 76.0
A03p58760 Brassica napus HOM05D006447 ORTHO05D007938 1.4e-87 326.6 208 77.9
GSVIVG01015263001 Vitis vinifera HOM05D006447 ORTHO05D007938 1.9e-87 326.2 197 80.2
Lj7A670G54 Lonicera japonica HOM05D006447 ORTHO05D007938 2.4e-87 325.9 211 78.2
PSO063G5072 Papaver somniferum HOM05D006447 ORTHO05D007938 2.4e-87 325.9 213 75.6
AL7G23270 Arabidopsis lyrata HOM05D006447 ORTHO05D007938 5.4e-87 324.7 215 75.3
ClCG03G015910 Citrullus lanatus HOM05D006447 ORTHO05D007938 7.1e-87 324.3 196 83.7
Nn8g38980 Nelumbo nucifera HOM05D006447 ORTHO05D007938 9.3e-87 323.9 217 74.2
SGA_v2.0_scaffold210G42077 Striga asiatica HOM05D006447 ORTHO05D007938 1.6e-86 323.2 211 74.4
Os09g0280600 Oryza sativa ssp. japonica HOM05D006447 ORTHO05D007938 7.8e-86 320.9 207 76.3
unitig_749.g13512 Utricularia gibba HOM05D006447 ORTHO05D007938 1.0e-85 320.5 214 72.9
Oeu057342.1 Olea europaea HOM05D006447 ORTHO05D007938 1.3e-85 320.1 193 81.3
PSO832G0153 Papaver somniferum HOM05D006447 ORTHO05D007938 1.3e-85 320.1 213 74.2
PGSC0003DMG400000348 Solanum tuberosum HOM05D006447 ORTHO05D007938 1.3e-85 320.1 244 68.4
Rhsim05G0029800 Rhododendron simsii HOM05D006447 ORTHO05D007938 3.9e-85 318.5 202 79.2
MBI01_g35891_MAGBIO Magnolia biondii HOM05D006447 ORTHO05D007938 2.5e-84 315.8 206 74.8
ATR0705G171 Amborella trichopoda HOM05D006447 ORTHO05D007938 4.3e-84 315.1 207 74.4
C07p56700 Brassica napus HOM05D006447 ORTHO05D007938 5.6e-84 314.7 235 69.4
Haze_25859 Corylus avellana HOM05D006447 ORTHO05D007938 1.3e-83 313.5 219 74.4
Cc06_g10870 Coffea canephora HOM05D006447 ORTHO05D007938 3.1e-82 308.9 197 75.6
Thecc.09G095600 Theobroma cacao HOM05D006447 ORTHO05D007938 3.1e-82 308.9 219 73.1
TWI34G0617 Tripterygium wilfordii HOM05D006447 ORTHO05D007938 4.0e-82 308.5 219 74.9
BcaNung00458 Brassica carinata HOM05D006447 ORTHO05D007938 3.4e-81 305.4 194 77.3
Eucgr.L02391 Eucalyptus grandis HOM05D006447 ORTHO05D007938 6.4e-80 301.2 196 75.5
FAN19G0010 Fragaria x ananassa HOM05D006447 ORTHO05D007938 6.4e-80 301.2 219 71.2
Psat1g048880 Pisum sativum HOM05D006447 ORTHO05D007938 7.9e-78 294.3 173 87.3
AUR62010457 Chenopodium quinoa HOM05D006447 ORTHO05D007938 4.3e-76 288.5 183 75.4
Pp3c5_5010 Physcomitrium patens HOM05D006447 ORTHO05D007938 5.6e-76 288.1 207 67.1
SMO133G0018 Selaginella moellendorffii HOM05D006447 ORTHO05D007938 5.6e-76 288.1 206 67.5
Zm00001eb094560 Zea mays HOM05D006447 ORTHO05D007938 1.5e-73 280.0 214 66.8
HPP92_025693 Vanilla planifolia HOM05D006447 ORTHO05D007938 2.0e-73 279.6 197 71.6
Mapoly0019s0059 Marchantia polymorpha HOM05D006447 ORTHO05D007938 7.1e-71 271.2 207 65.7
Gohir.D07G009900 Gossypium hirsutum HOM05D006447 ORTHO05D007938 1.2e-70 270.4 170 80.0
AagrBONN_evm.TU.Sc2ySwM_344.5016 Anthoceros agrestis HOM05D006447 ORTHO05D007938 1.6e-70 270.0 207 66.7
FAN26G1122 Fragaria x ananassa HOM05D006447 ORTHO05D007938 4.6e-70 268.5 219 66.7
Atru.BG.7.p Acer truncatum HOM05D006447 ORTHO05D007938 2.8e-67 259.2 202 68.3
Dinv42281 Davidia involucrata HOM05D006447 ORTHO05D007938 6.5e-64 248.1 223 61.9
COL.COLO4_18262 Corchorus olitorius HOM05D006447 ORTHO05D007938 4.2e-63 245.4 154 82.5
SHI02797 Sapria himalayana HOM05D006447 ORTHO05D007938 8.7e-61 237.7 173 69.4
vmacro10828 Vaccinium macrocarpon HOM05D006447 ORTHO05D007938 8.7e-61 237.7 210 59.0
PGR142G2135 Punica granatum HOM05D006447 ORTHO05D007938 1.3e-56 223.8 141 74.5
CiPaw.04G153800 Carya illinoinensis HOM05D006447 ORTHO05D007938 5.0e-56 221.9 143 81.8
CAN.G3484.1 Capsicum annuum HOM05D006447 ORTHO05D007938 2.7e-54 216.1 138 81.2
Aqoxy2G00494 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 7.2e-47 191.4 183 56.3
Sp7g27093 Schrenkiella parvula HOM05D006447 ORTHO05D007938 1.5e-44 183.7 113 79.6
CDE05G0869 Ceratophyllum demersum HOM05D006447 ORTHO05D007938 6.3e-43 178.3 132 67.4
CAN.G1241.4 Capsicum annuum HOM05D006447 ORTHO05D007938 1.1e-42 177.6 120 75.0
MELO3C015434.2 Cucumis melo HOM05D006447 ORTHO05D007938 3.8e-40 169.1 218 50.0
Mapoly0063s0089 Marchantia polymorpha HOM05D006447 ORTHO05D007938 4.4e-36 155.6 115 70.4
CAN.G4329.1 Capsicum annuum HOM05D006447 ORTHO05D007938 4.8e-35 152.1 108 72.2
Sp7g27097 Schrenkiella parvula HOM05D006447 ORTHO05D007938 1.0e-32 144.4 96 70.8
MCO03G125 Micromonas commoda HOM05D006447 ORTHO05D007938 2.9e-32 142.9 204 38.7
PRCOL_00003806 Prasinoderma coloniale HOM05D006447 ORTHO05D007938 3.0e-29 132.9 212 37.7
Cre06.g278850 Chlamydomonas reinhardtii HOM05D006447 ORTHO05D007938 7.0e-26 121.7 197 33.5
C08p09440 Brassica napus HOM05D006447 ORTHO05D007938 2.5e-23 113.2 101 61.4
BolC8t47800H Brassica oleracea HOM05D006447 ORTHO05D007938 4.2e-23 112.5 101 60.4
HanXRQChr11g0335721 Helianthus annuus HOM05D006447 ORTHO05D007938 2.1e-22 110.2 81 72.8
Lsat_1_v5_gn_1_67520 Lactuca sativa HOM05D006447 ORTHO05D007938 6.3e-19 98.6 76 65.8
CBR_g8047 Chara braunii HOM05D006447 ORTHO05D007938 2.7e-17 93.2 78 51.3
COL.COLO4_18261 Corchorus olitorius HOM05D006447 ORTHO05D007938 3.8e-16 89.4 51 74.5


User provided reference genes

Program Settings