Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0016909 Lotus japonicus HOM05D007691 ORTHO05D008758 1.4e-44 182.6 92 100.0
Lalb_Chr14g0364941 Lupinus albus HOM05D007691 ORTHO05D008758 1.3e-18 96.3 96 58.3
Psat1g088640 Pisum sativum HOM05D007691 ORTHO05D008758 8.5e-18 93.6 94 52.1
Glyma.03G007400 Glycine max HOM05D007691 ORTHO05D008758 1.9e-17 92.4 94 59.6
Glyma.19G118700 Glycine max HOM05D007691 ORTHO05D008758 5.5e-17 90.9 94 59.6
Lalb_Chr21g0317311 Lupinus albus HOM05D007691 ORTHO05D008758 1.2e-16 89.7 95 57.9
Lalb_Chr02g0157501 Lupinus albus HOM05D007691 ORTHO05D008758 2.8e-16 88.6 95 51.6
Medtr6g027320 Medicago truncatula HOM05D007691 ORTHO05D008758 6.1e-16 87.4 68 60.3
Lj1g0027070 Lotus japonicus HOM05D007691 ORTHO05D008758 4.0e-15 84.7 84 54.8
TPR.G33917 Trifolium pratense HOM05D007691 ORTHO05D008758 5.2e-15 84.3 97 53.6
arahy.Tifrunner.gnm1.ann1.F64EX1 Arachis hypogaea HOM05D007691 ORTHO05D008758 1.3e-13 79.7 98 54.1
arahy.Tifrunner.gnm1.ann1.K1K8SL Arachis hypogaea HOM05D007691 ORTHO05D008758 2.2e-13 79.0 98 54.1
arahy.Tifrunner.gnm1.ann1.MY48C3 Arachis hypogaea HOM05D007691 ORTHO05D008758 6.3e-13 77.4 94 54.3
arahy.Tifrunner.gnm1.ann1.5EZ2U4 Arachis hypogaea HOM05D007691 ORTHO05D008758 4.1e-12 74.7 101 52.5
Dinv25036 Davidia involucrata HOM05D007691 ORTHO05D008758 5.4e-12 74.3 96 47.9
Lalb_Chr22g0358551 Lupinus albus HOM05D007691 ORTHO05D008758 1.3e-10 69.7 45 71.1
Phvul.001G106900 Phaseolus vulgaris HOM05D007691 ORTHO05D008758 1.7e-10 69.3 94 51.1
Sabra13G0058100 Salix brachista HOM05D007691 ORTHO05D008758 2.9e-10 68.6 93 48.4
Actinidia03917 Actinidia chinensis HOM05D007691 ORTHO05D008758 3.8e-10 68.2 96 45.8
MD14G1010200 Malus domestica HOM05D007691 ORTHO05D008758 3.8e-10 68.2 84 46.4
Manes.08G152200 Manihot esculenta HOM05D007691 ORTHO05D008758 3.8e-10 68.2 95 45.3
Potri.013G066600 Populus trichocarpa HOM05D007691 ORTHO05D008758 6.6e-10 67.4 84 50.0
MD12G1012400 Malus domestica HOM05D007691 ORTHO05D008758 8.6e-10 67.0 81 48.1
Ciclev10022756m.g Citrus clementina HOM05D007691 ORTHO05D008758 1.5e-09 66.2 96 41.7
Manes.09G136400 Manihot esculenta HOM05D007691 ORTHO05D008758 2.5e-09 65.5 89 47.2
Actinidia37824 Actinidia chinensis HOM05D007691 ORTHO05D008758 3.3e-09 65.1 96 43.8
Hma1.2p1_0075F.1_g039350 Hydrangea macrophylla HOM05D007691 ORTHO05D008758 4.3e-09 64.7 90 42.2
QL07p017243 Quercus lobata HOM05D007691 ORTHO05D008758 5.6e-09 64.3 94 44.7
Actinidia06207 Actinidia chinensis HOM05D007691 ORTHO05D008758 7.3e-09 63.9 83 45.8
Manes.13G143001 Manihot esculenta HOM05D007691 ORTHO05D008758 2.8e-08 62.0 84 44.0
Gohir.D11G240200 Gossypium hirsutum HOM05D007691 ORTHO05D008758 3.6e-08 61.6 80 45.0
Dinv13794 Davidia involucrata HOM05D007691 ORTHO05D008758 4.7e-08 61.2 98 41.8
Gorai.007G253600 Gossypium raimondii HOM05D007691 ORTHO05D008758 6.1e-08 60.8 80 45.0
TAR623G0909 Trochodendron aralioides HOM05D007691 ORTHO05D008758 6.1e-08 60.8 70 47.1
Prupe.7G016300 Prunus persica HOM05D007691 ORTHO05D008758 1.4e-07 59.7 83 43.4
Gohir.A11G227700 Gossypium hirsutum HOM05D007691 ORTHO05D008758 3.0e-07 58.5 80 43.8
Hma1.2p1_0636F.1_g193350 Hydrangea macrophylla HOM05D007691 ORTHO05D008758 5.2e-07 57.8 42 64.3
Lalb_Chr02g0157431 Lupinus albus HOM05D007691 ORTHO05D008758 5.2e-07 57.8 83 47.0
CSS0005044 Camellia sinensis var. sinensis HOM05D007691 ORTHO05D008758 1.5e-06 56.2 96 42.7
Sabra19G0050800 Salix brachista HOM05D007691 ORTHO05D008758 2.0e-06 55.8 124 33.9
Thecc.05G240900 Theobroma cacao HOM05D007691 ORTHO05D008758 2.0e-06 55.8 98 39.8
Medtr7g086770 Medicago truncatula HOM05D007691 ORTHO05D008758 2.6e-06 55.5 92 44.6
TAR633G0734 Trochodendron aralioides HOM05D007691 ORTHO05D008758 3.4e-06 55.1 96 37.5
COL.COLO4_20083 Corchorus olitorius HOM05D007691 ORTHO05D008758 5.7e-06 54.3 84 40.5
DCAR_013492 Daucus carota HOM05D007691 ORTHO05D008758 7.5e-06 53.9 84 38.1
Lalb_Chr14g0364871 Lupinus albus HOM05D007691 ORTHO05D008758 7.5e-06 53.9 72 37.5
Nn6g32394 Nelumbo nucifera HOM05D007691 ORTHO05D008758 7.5e-06 53.9 94 39.4
Eucgr.A02145 Eucalyptus grandis HOM05D007691 ORTHO05D008758 9.8e-06 53.5 32 65.6


User provided reference genes

Program Settings