Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0016631 Lotus japonicus HOM05D006398 ORTHO05D007983 1.3e-68 263.1 144 100.0
Lalb_Chr16g0380261 Lupinus albus HOM05D006398 ORTHO05D007983 1.0e-54 216.9 144 84.0
Ca_25041_v3 Cicer arietinum L. HOM05D006398 ORTHO05D007983 1.7e-52 209.5 144 76.4
Medtr5g025015 Medicago truncatula HOM05D006398 ORTHO05D007983 1.2e-50 203.4 144 75.0
Glyma.11G089000 Glycine max HOM05D006398 ORTHO05D007983 5.0e-49 198.0 144 79.2
TPR.G33762 Trifolium pratense HOM05D006398 ORTHO05D007983 4.3e-48 194.9 144 72.2
Psat2g147080 Pisum sativum HOM05D006398 ORTHO05D007983 1.7e-44 183.0 141 69.5
Phvul.002G119800 Phaseolus vulgaris HOM05D006398 ORTHO05D007983 2.3e-41 172.6 139 74.8
VMungo1215G0575 Vigna mungo HOM05D006398 ORTHO05D007983 3.0e-41 172.2 139 73.4
Prupe.7G188600 Prunus persica HOM05D006398 ORTHO05D007983 1.2e-39 166.8 141 63.8
Glyma.01G155800 Glycine max HOM05D006398 ORTHO05D007983 3.1e-38 162.2 128 74.2
COL.COLO4_15698 Corchorus olitorius HOM05D006398 ORTHO05D007983 1.3e-36 156.8 144 66.0
Thecc.04G122700 Theobroma cacao HOM05D006398 ORTHO05D007983 3.7e-36 155.2 145 59.3
CiPaw.03G212200 Carya illinoinensis HOM05D006398 ORTHO05D007983 1.1e-35 153.7 146 66.4
Cfa011161 Carpinus fangiana HOM05D006398 ORTHO05D007983 1.9e-35 152.9 143 66.4
Dinv24399 Davidia involucrata HOM05D006398 ORTHO05D007983 1.9e-35 152.9 143 57.3
Dinv28289 Davidia involucrata HOM05D006398 ORTHO05D007983 1.9e-35 152.9 143 57.3
FAN23G0152 Fragaria x ananassa HOM05D006398 ORTHO05D007983 1.9e-35 152.9 141 60.3
FAN26G0304 Fragaria x ananassa HOM05D006398 ORTHO05D007983 3.2e-35 152.1 141 60.3
QL06p053503 Quercus lobata HOM05D006398 ORTHO05D007983 3.2e-35 152.1 145 64.1
Dinv19113 Davidia involucrata HOM05D006398 ORTHO05D007983 9.2e-35 150.6 145 58.6
FvH4_1g09810 Fragaria vesca HOM05D006398 ORTHO05D007983 9.2e-35 150.6 141 58.9
FAN19G1193 Fragaria x ananassa HOM05D006398 ORTHO05D007983 9.2e-35 150.6 141 58.9
Duzib133G0235 Durio zibethinus HOM05D006398 ORTHO05D007983 1.2e-34 150.2 145 62.8
TAR381G1497 Trochodendron aralioides HOM05D006398 ORTHO05D007983 6.0e-34 147.9 143 57.3
Gohir.A07G076575 Gossypium hirsutum HOM05D006398 ORTHO05D007983 5.1e-33 144.8 147 60.5
Gorai.001G086400 Gossypium raimondii HOM05D006398 ORTHO05D007983 5.1e-33 144.8 147 60.5
Gohir.D07G081300 Gossypium hirsutum HOM05D006398 ORTHO05D007983 1.9e-32 142.9 147 60.5
CSS0046434 Camellia sinensis var. sinensis HOM05D006398 ORTHO05D007983 3.3e-32 142.1 145 56.6
CSS0002146 Camellia sinensis var. sinensis HOM05D006398 ORTHO05D007983 5.6e-32 141.4 145 56.6
Manes.02G117704 Manihot esculenta HOM05D006398 ORTHO05D007983 5.6e-32 141.4 145 53.8
Hma1.2p1_0085F.1_g044270 Hydrangea macrophylla HOM05D006398 ORTHO05D007983 7.3e-32 141.0 145 55.9
Manes.01G158600 Manihot esculenta HOM05D006398 ORTHO05D007983 9.5e-32 140.6 140 55.7
Atru.chr3.7 Acer truncatum HOM05D006398 ORTHO05D007983 1.6e-31 139.8 143 58.0
Cfa007121 Carpinus fangiana HOM05D006398 ORTHO05D007983 1.6e-31 139.8 146 62.3
FAN28G0584 Fragaria x ananassa HOM05D006398 ORTHO05D007983 1.6e-31 139.8 141 60.3
Actinidia28761 Actinidia chinensis HOM05D006398 ORTHO05D007983 6.2e-31 137.9 145 60.0
Aqoxy5G00947 Aquilegia oxysepala HOM05D006398 ORTHO05D007983 6.2e-31 137.9 145 58.6
RcHm_v2.0_Chr2g0096641 Rosa chinensis HOM05D006398 ORTHO05D007983 6.2e-31 137.9 141 60.3
Ciclev10026700m.g Citrus clementina HOM05D006398 ORTHO05D007983 1.1e-30 137.1 146 61.6
Gohir.A11G167300 Gossypium hirsutum HOM05D006398 ORTHO05D007983 5.2e-30 134.8 143 58.0
Gorai.007G185900 Gossypium raimondii HOM05D006398 ORTHO05D007983 5.2e-30 134.8 144 57.6
Lalb_Chr05g0215011 Lupinus albus HOM05D006398 ORTHO05D007983 1.2e-29 133.7 144 60.4
Potri.011G146400 Populus trichocarpa HOM05D006398 ORTHO05D007983 1.2e-29 133.7 144 52.1
vmacro20410 Vaccinium macrocarpon HOM05D006398 ORTHO05D007983 1.5e-29 133.3 144 54.2
MD15G1226600 Malus domestica HOM05D006398 ORTHO05D007983 9.9e-29 130.6 135 58.5
TAR376G1029 Trochodendron aralioides HOM05D006398 ORTHO05D007983 9.9e-29 130.6 143 51.7
Sabra11G0131300 Salix brachista HOM05D006398 ORTHO05D007983 1.7e-28 129.8 143 49.7
Nn6g31587 Nelumbo nucifera HOM05D006398 ORTHO05D007983 2.2e-28 129.4 145 54.5
Nitab4.5_0012518g0010 Nicotiana tabacum HOM05D006398 ORTHO05D007983 2.2e-28 129.4 145 53.1
Gohir.D11G173600 Gossypium hirsutum HOM05D006398 ORTHO05D007983 2.9e-28 129.0 138 56.5
Nitab4.5_0011544g0020 Nicotiana tabacum HOM05D006398 ORTHO05D007983 2.9e-28 129.0 136 54.4
MBI04_g11522_MAGBIO Magnolia biondii HOM05D006398 ORTHO05D007983 3.8e-28 128.6 142 52.1
PGR119G1180 Punica granatum HOM05D006398 ORTHO05D007983 3.8e-28 128.6 147 59.9
Lj4P245T44 Lonicera japonica HOM05D006398 ORTHO05D007983 1.6e-26 123.2 141 54.6
DCAR_014127 Daucus carota HOM05D006398 ORTHO05D007983 2.7e-26 122.5 144 52.8
Oeu024785.2 Olea europaea HOM05D006398 ORTHO05D007983 1.7e-25 119.8 143 49.0
Peaxi162Scf00981g00021 Petunia axillaris HOM05D006398 ORTHO05D007983 3.9e-25 118.6 144 56.2
MSTRG.19082 Avicennia marina HOM05D006398 ORTHO05D007983 5.1e-25 118.2 143 50.3
PGR042G1229 Punica granatum HOM05D006398 ORTHO05D007983 8.7e-25 117.5 147 55.8
Cfa000559 Carpinus fangiana HOM05D006398 ORTHO05D007983 2.5e-24 115.9 95 62.1
Oeu000786.1 Olea europaea HOM05D006398 ORTHO05D007983 2.5e-24 115.9 144 52.1
Sabra16G0308300 Salix brachista HOM05D006398 ORTHO05D007983 2.5e-24 115.9 145 48.3
SalBow3G3387 Salvia bowleyana HOM05D006398 ORTHO05D007983 4.3e-24 115.2 136 50.7
Sopen02g017390 Solanum pennellii HOM05D006398 ORTHO05D007983 9.6e-24 114.0 145 49.7
CANSAT56G1034 Cannabis sativa HOM05D006398 ORTHO05D007983 1.2e-23 113.6 134 53.0
Solyc02g068290.2 Solanum lycopersicum HOM05D006398 ORTHO05D007983 1.2e-23 113.6 145 49.7
CsaV3_6G047960 Cucumis sativus L. HOM05D006398 ORTHO05D007983 2.8e-23 112.5 136 49.3
Rhsim10G0190200 Rhododendron simsii HOM05D006398 ORTHO05D007983 2.8e-23 112.5 127 48.0
PSO017G0885 Papaver somniferum HOM05D006398 ORTHO05D007983 3.6e-23 112.1 142 49.3
Sed0010545 Sechium edule HOM05D006398 ORTHO05D007983 3.6e-23 112.1 132 49.2
PGSC0003DMG400009426 Solanum tuberosum HOM05D006398 ORTHO05D007983 3.6e-23 112.1 144 49.3
MELO3C007985.2 Cucumis melo HOM05D006398 ORTHO05D007983 6.2e-23 111.3 137 50.4
Eucgr.J02575 Eucalyptus grandis HOM05D006398 ORTHO05D007983 6.2e-23 111.3 143 51.0
CAN.G883.23 Capsicum annuum HOM05D006398 ORTHO05D007983 8.1e-23 110.9 145 55.2
PSO017G7180 Papaver somniferum HOM05D006398 ORTHO05D007983 2.4e-22 109.4 144 49.3
ECA238G1438 Erigeron canadensis HOM05D006398 ORTHO05D007983 1.2e-21 107.1 143 49.0
ATR0605G223 Amborella trichopoda HOM05D006398 ORTHO05D007983 2.6e-21 105.9 145 52.4
TWI53G1768 Tripterygium wilfordii HOM05D006398 ORTHO05D007983 1.3e-20 103.6 140 49.3
Haze_03650 Corylus avellana HOM05D000071 ORTHO05D007983 8.4e-20 100.9 102 62.7
Sed0016714 Sechium edule HOM05D006398 ORTHO05D007983 1.9e-19 99.8 105 61.0
Hma1.2p1_0353F.1_g133130 Hydrangea macrophylla HOM05D006398 ORTHO05D007983 2.4e-19 99.4 143 43.4
HanXRQChr10g0316121 Helianthus annuus HOM05D006398 ORTHO05D007983 3.2e-19 99.0 136 45.6
Cfa012756 Carpinus fangiana HOM05D006398 ORTHO05D007983 5.4e-19 98.2 98 60.2
TAR628G0945 Trochodendron aralioides HOM05D006398 ORTHO05D007983 1.2e-18 97.1 107 54.2
MD02G1107400 Malus domestica HOM05D006398 ORTHO05D007983 1.6e-18 96.7 86 60.5
Migut.J00328 Erythranthe guttata HOM05D006398 ORTHO05D007983 7.8e-18 94.4 97 49.5
arahy.Tifrunner.gnm1.ann1.GQ5KDA Arachis hypogaea HOM05D006398 ORTHO05D007983 2.3e-17 92.8 53 84.9
HPP92_018846 Vanilla planifolia HOM05D006398 ORTHO05D007983 2.3e-17 92.8 142 40.1
CDE06G2001 Ceratophyllum demersum HOM05D006398 ORTHO05D007983 8.7e-17 90.9 141 43.3
SGA_v2.0_scaffold126G33784 Striga asiatica HOM05D006398 ORTHO05D007983 2.1e-15 86.3 139 41.7
CDE04G3216 Ceratophyllum demersum HOM05D006398 ORTHO05D007983 3.6e-15 85.5 150 42.0
Sc03g0004180 Simmondsia chinensis HOM05D006398 ORTHO05D007983 1.4e-14 83.6 144 43.8
HPP92_018898 Vanilla planifolia HOM05D006398 ORTHO05D007983 1.4e-14 83.6 93 46.2
EL10Ac5g11754 Beta vulgaris HOM05D006398 ORTHO05D007983 2.4e-14 82.8 145 41.4
Lsat_1_v5_gn_2_72860 Lactuca sativa HOM05D006398 ORTHO05D007983 4.0e-14 82.0 68 54.4
SEGI_02084 Sequoiadendron giganteum HOM05D006398 ORTHO05D007983 1.2e-13 80.5 135 40.0
Ah.02g115220 Amaranthus hybridus HOM05D006398 ORTHO05D007983 1.5e-13 80.1 143 38.5
Os02g0193500 Oryza sativa ssp. japonica HOM05D006398 ORTHO05D007983 4.5e-13 78.6 142 37.3
Zm00001eb236520 Zea mays HOM05D006398 ORTHO05D007983 2.9e-12 75.9 143 46.2
Carub.0005s1788 Capsella rubella HOM05D006398 ORTHO05D007983 7.1e-11 71.2 139 45.3
Cpa.g.sc178.36 Carica papaya HOM05D006398 ORTHO05D007983 9.3e-11 70.9 104 41.3
Sp5g10740 Schrenkiella parvula HOM05D006398 ORTHO05D007983 3.5e-10 68.9 138 44.2
AT3G51500 Arabidopsis thaliana HOM05D006398 ORTHO05D007983 1.8e-09 66.6 138 44.2
THA.LOC109117268 Tarenaya hassleriana HOM05D006398 ORTHO05D007983 3.0e-09 65.9 142 43.0
AL5G31940 Arabidopsis lyrata HOM05D006398 ORTHO05D007983 1.1e-08 63.9 138 43.5
SHI11157 Sapria himalayana HOM05D006398 ORTHO05D007983 1.5e-08 63.5 134 35.1
Thhalv10010838m.g Eutrema salsugineum HOM05D006398 ORTHO05D007983 7.4e-08 61.2 138 41.3
Aa31LG4G7260 Aethionema arabicum HOM05D000087 ORTHO05D002585 9.6e-08 60.8 60 66.7
CARHR161080 Cardamine hirsuta HOM05D006398 ORTHO05D007983 2.8e-07 59.3 138 40.6
unitig_8.g4055 Utricularia gibba HOM05D006398 ORTHO05D007983 4.8e-07 58.5 141 40.4
AUR62036260 Chenopodium quinoa HOM05D006398 ORTHO05D007983 1.1e-06 57.4 146 33.6
A03p48310 Brassica napus HOM05D006398 ORTHO05D007983 1.4e-06 57.0 131 36.6
BcaNung00381 Brassica carinata HOM05D006398 ORTHO05D007983 3.1e-06 55.8 138 41.3
AUR62039711 Chenopodium quinoa HOM05D006398 ORTHO05D007983 4.0e-06 55.5 146 33.6
A01p23410 Brassica napus HOM05D006398 ORTHO05D007983 9.0e-06 54.3 116 38.8


User provided reference genes

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