Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0016450 Lotus japonicus HOM05D001119 ORTHO05D000862 1.5e-115 419.5 208 100.0
Lj1g0024903 Lotus japonicus HOM05D001119 ORTHO05D000862 1.0e-63 247.3 153 80.4
Lj3g0002278 Lotus japonicus HOM05D001119 ORTHO05D000862 9.8e-62 240.7 142 80.3
Lj4g0017342 Lotus japonicus HOM05D001119 ORTHO05D000862 1.2e-43 180.6 153 60.1
Lj4g0023093 Lotus japonicus HOM05D001119 ORTHO05D000862 9.5e-33 144.4 122 61.5
Lj3g0021803 Lotus japonicus HOM05D001119 ORTHO05D000862 2.6e-30 136.3 88 78.4
Glyma.02G161566 Glycine max HOM05D001119 ORTHO05D000862 8.7e-26 121.3 157 44.6
Phvul.007G239900 Phaseolus vulgaris HOM05D001119 ORTHO05D000862 6.9e-23 111.7 127 48.0
Ca_27106_v3 Cicer arietinum L. HOM05D001119 ORTHO05D000862 7.6e-22 108.2 150 43.3
Psat0s1161g0040 Pisum sativum HOM05D001119 ORTHO05D000862 7.6e-22 108.2 126 42.9
Glyma.02G156500 Glycine max HOM05D001119 ORTHO05D000862 1.5e-17 94.0 158 36.7
VMungo0720G1859 Vigna mungo HOM05D001119 ORTHO05D000862 1.9e-17 93.6 110 45.5
Medtr7g032860 Medicago truncatula HOM05D001119 ORTHO05D000862 2.5e-17 93.2 132 34.8
Medtr1g102760 Medicago truncatula HOM05D001119 ORTHO05D000862 1.1e-15 87.8 106 38.7
Medtr1g048380 Medicago truncatula HOM05D001119 ORTHO05D000862 9.0e-15 84.7 127 37.0
Lalb_Chr19g0129081 Lupinus albus HOM05D001119 ORTHO05D000862 1.3e-13 80.9 176 35.2
Phvul.004G140300 Phaseolus vulgaris HOM05D001119 ORTHO05D000862 4.9e-13 79.0 97 41.2
Lalb_Chr03g0036451 Lupinus albus HOM05D001119 ORTHO05D000862 8.4e-13 78.2 84 45.2
Medtr1g008090 Medicago truncatula HOM05D001119 ORTHO05D000862 1.1e-12 77.8 117 32.5
Cfa001587 Carpinus fangiana HOM05D001119 ORTHO05D000862 9.3e-12 74.7 120 40.8
CiPaw.01G277000 Carya illinoinensis HOM05D001119 ORTHO05D000862 1.2e-11 74.3 72 48.6
Medtr1g046710 Medicago truncatula HOM05D001119 ORTHO05D000862 2.7e-11 73.2 71 42.3
arahy.Tifrunner.gnm1.ann1.3R87N1 Arachis hypogaea HOM05D001119 ORTHO05D000862 6.0e-11 72.0 108 38.9
arahy.Tifrunner.gnm1.ann1.E6EV8K Arachis hypogaea HOM05D001119 ORTHO05D000862 6.0e-11 72.0 108 38.9
QL08p056978 Quercus lobata HOM05D001119 ORTHO05D000862 6.0e-11 72.0 82 45.1
Haze_16943 Corylus avellana HOM05D001119 ORTHO05D000862 1.0e-10 71.2 73 49.3
ClCG09G020410 Citrullus lanatus HOM05D001119 ORTHO05D000862 5.1e-10 68.9 78 38.5
Sabra10G0167500 Salix brachista HOM05D001119 ORTHO05D000862 1.9e-09 67.0 135 33.3
MD07G1180400 Malus domestica HOM05D001119 ORTHO05D000862 3.3e-09 66.2 127 32.3
Sed0006454 Sechium edule HOM05D001119 ORTHO05D000862 3.3e-09 66.2 85 34.1
Phvul.003G130800 Phaseolus vulgaris HOM05D001119 ORTHO05D000862 5.6e-09 65.5 77 40.3
MELO3C025499.2 Cucumis melo HOM05D001119 ORTHO05D000862 7.4e-09 65.1 77 37.7
TAR633G1771 Trochodendron aralioides HOM05D001119 ORTHO05D000862 7.4e-09 65.1 91 38.5
Oeu017236.1 Olea europaea HOM05D001119 ORTHO05D000862 1.3e-08 64.3 70 38.6
TPR.G35690 Trifolium pratense HOM05D001119 ORTHO05D000862 1.3e-08 64.3 109 32.1
VMungo1215G2745 Vigna mungo HOM05D001119 ORTHO05D000862 1.3e-08 64.3 77 41.6
TWI38G1075 Tripterygium wilfordii HOM05D001119 ORTHO05D000862 2.1e-08 63.5 91 38.5
TAR633G2176 Trochodendron aralioides HOM05D001119 ORTHO05D000862 2.8e-08 63.2 91 40.7
Dinv42392 Davidia involucrata HOM05D001119 ORTHO05D000862 4.8e-08 62.4 86 38.4
Rhsim03G0122400 Rhododendron simsii HOM05D001119 ORTHO05D000862 6.2e-08 62.0 108 33.3
Rhsim05G0007600 Rhododendron simsii HOM05D001119 ORTHO05D000862 6.2e-08 62.0 99 36.4
Sabra08G0031200 Salix brachista HOM05D001119 ORTHO05D000862 1.1e-07 61.2 108 33.3
Hma1.2p1_0192F.1_g083540 Hydrangea macrophylla HOM05D001119 ORTHO05D000862 1.4e-07 60.8 71 39.4
CsaV3_5G026010 Cucumis sativus L. HOM05D001119 ORTHO05D000862 1.8e-07 60.5 77 33.8
Solyc12g020130.1 Solanum lycopersicum HOM05D001119 ORTHO05D000862 1.8e-07 60.5 84 38.1
Gohir.D13G022000 Gossypium hirsutum HOM05D001119 ORTHO05D000862 3.1e-07 59.7 70 34.3
Gorai.013G024800 Gossypium raimondii HOM05D001119 ORTHO05D000862 3.1e-07 59.7 70 34.3
Duzib128G1698 Durio zibethinus HOM05D001119 ORTHO05D000862 4.0e-07 59.3 72 38.9
Actinidia30219 Actinidia chinensis HOM05D001119 ORTHO05D000862 5.3e-07 58.9 76 38.2
QL11p000739 Quercus lobata HOM05D001119 ORTHO05D000862 9.0e-07 58.2 75 40.0
Cc09_g02590 Coffea canephora HOM05D001119 ORTHO05D000862 1.5e-06 57.4 68 33.8
Nn2g14752 Nelumbo nucifera HOM05D001119 ORTHO05D000862 1.5e-06 57.4 68 41.2
Potri.008G045000 Populus trichocarpa HOM05D001119 ORTHO05D000862 1.5e-06 57.4 107 34.6
Haze_26011 Corylus avellana HOM05D001119 ORTHO05D000862 2.6e-06 56.6 75 37.3
Glyma.13G110400 Glycine max HOM05D001119 ORTHO05D000862 2.6e-06 56.6 72 37.5
Atru.chr7.1703 Acer truncatum HOM05D001119 ORTHO05D000862 3.4e-06 56.2 73 38.4
Cpa.g.sc1.267 Carica papaya HOM05D001119 ORTHO05D000862 3.4e-06 56.2 95 36.8
Nn2g10643 Nelumbo nucifera HOM05D001119 ORTHO05D000862 3.4e-06 56.2 72 41.7
Thecc.10G066900 Theobroma cacao HOM05D001119 ORTHO05D000862 3.4e-06 56.2 97 34.0
CSS0011228 Camellia sinensis var. sinensis HOM05D001119 ORTHO05D000862 4.5e-06 55.8 84 38.1
CSS0035501 Camellia sinensis var. sinensis HOM05D001119 ORTHO05D000862 5.8e-06 55.5 83 36.1
PGR142G2693 Punica granatum HOM05D001119 ORTHO05D000862 5.8e-06 55.5 88 31.8
RcHm_v2.0_Chr5g0048831 Rosa chinensis HOM05D001119 ORTHO05D000862 5.8e-06 55.5 70 37.1
TAR383G0586 Trochodendron aralioides HOM05D001119 ORTHO05D000862 5.8e-06 55.5 117 26.5
GSVIVG01015084001 Vitis vinifera HOM05D001119 ORTHO05D000862 5.8e-06 55.5 73 37.0
Ciclev10010600m.g Citrus clementina HOM05D001119 ORTHO05D000862 7.6e-06 55.1 75 36.0
Manes.16G095400 Manihot esculenta HOM05D001119 ORTHO05D000862 7.6e-06 55.1 75 36.0
Manes.10G041300 Manihot esculenta HOM05D001119 ORTHO05D000862 9.9e-06 54.7 76 39.5


User provided reference genes

Program Settings