Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0016254 Lotus japonicus HOM05D006100 ORTHO05D007539 6.9e-66 253.8 128 100.0
VMungo1215G0978 Vigna mungo HOM05D006100 ORTHO05D007539 2.6e-41 172.2 129 72.9
Lalb_Chr09g0322441 Lupinus albus HOM05D006100 ORTHO05D007539 3.4e-41 171.8 130 73.8
Phvul.002G029900 Phaseolus vulgaris HOM05D006100 ORTHO05D007539 3.2e-39 165.2 130 70.8
arahy.Tifrunner.gnm1.ann1.L1JEHI Arachis hypogaea HOM05D006100 ORTHO05D007539 1.4e-37 159.8 139 66.9
Psat2g159960 Pisum sativum HOM05D006100 ORTHO05D007539 7.4e-36 154.1 129 69.0
arahy.Tifrunner.gnm1.ann1.IKK69W Arachis hypogaea HOM05D006100 ORTHO05D007539 3.7e-35 151.8 139 65.5
Medtr5g020060 Medicago truncatula HOM05D006100 ORTHO05D007539 4.8e-35 151.4 133 67.7
Glyma.11G067900 Glycine max HOM05D006100 ORTHO05D007539 1.6e-30 136.3 127 63.0
THA.LOC104821276 Tarenaya hassleriana HOM05D006100 ORTHO05D007539 1.3e-27 126.7 129 58.9
QL06p045927 Quercus lobata HOM05D006100 ORTHO05D007539 2.8e-27 125.6 135 54.1
Prupe.7G153900 Prunus persica HOM05D006100 ORTHO05D007539 8.2e-27 124.0 135 54.8
Sp2g29900 Schrenkiella parvula HOM05D006100 ORTHO05D007539 8.2e-27 124.0 124 58.1
AT5G66780 Arabidopsis thaliana HOM05D006100 ORTHO05D007539 1.8e-26 122.9 128 54.7
TPR.G34229 Trifolium pratense HOM05D006100 ORTHO05D007539 1.8e-26 122.9 105 63.8
Duzib147G1001 Durio zibethinus HOM05D006100 ORTHO05D007539 2.4e-26 122.5 137 59.1
Thhalv10005154m.g Eutrema salsugineum HOM05D006100 ORTHO05D007539 1.5e-25 119.8 124 56.5
A07p17150 Brassica napus HOM05D006100 ORTHO05D007539 3.5e-25 118.6 124 56.5
BraA07t29442Z Brassica rapa HOM05D006100 ORTHO05D007539 3.5e-25 118.6 124 56.5
MD15G1262900 Malus domestica HOM05D006100 ORTHO05D007539 3.5e-25 118.6 114 57.9
AL8G44670 Arabidopsis lyrata HOM05D006100 ORTHO05D007539 4.5e-25 118.2 128 52.3
BolC7t43033H Brassica oleracea HOM05D006100 ORTHO05D007539 5.9e-25 117.9 124 56.5
Haze_15098 Corylus avellana HOM05D006100 ORTHO05D007539 5.9e-25 117.9 120 60.0
BcaC06g34744 Brassica carinata HOM05D006100 ORTHO05D007539 7.7e-25 117.5 125 56.8
C07p25000 Brassica napus HOM05D006100 ORTHO05D007539 7.7e-25 117.5 125 56.8
Dinv39980 Davidia involucrata HOM05D006100 ORTHO05D007539 1.3e-24 116.7 133 55.6
Lsat_1_v5_gn_4_148381 Lactuca sativa HOM05D006100 ORTHO05D007539 1.7e-24 116.3 97 63.9
Thecc.01G036600 Theobroma cacao HOM05D006100 ORTHO05D007539 2.9e-24 115.5 134 53.7
CARHR280920 Cardamine hirsuta HOM05D006100 ORTHO05D007539 3.8e-24 115.2 123 56.9
Ciclev10026748m.g Citrus clementina HOM05D006100 ORTHO05D007539 5.0e-24 114.8 136 53.7
COL.COLO4_22086 Corchorus olitorius HOM05D006100 ORTHO05D007539 6.5e-24 114.4 138 51.4
FvH4_1g13390 Fragaria vesca HOM05D006100 ORTHO05D007539 6.5e-24 114.4 116 58.6
FAN19G3207 Fragaria x ananassa HOM05D006100 ORTHO05D007539 6.5e-24 114.4 116 58.6
FAN23G1739 Fragaria x ananassa HOM05D006100 ORTHO05D007539 6.5e-24 114.4 130 51.5
Carub.0008s2773 Capsella rubella HOM05D006100 ORTHO05D007539 8.5e-24 114.0 101 63.4
BcaB07g29655 Brassica carinata HOM05D006100 ORTHO05D007539 1.1e-23 113.6 125 54.4
CiPaw.02G017200 Carya illinoinensis HOM05D006100 ORTHO05D007539 1.1e-23 113.6 92 68.5
FAN28G1903 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.1e-23 113.6 116 56.9
FAN19G2702 Fragaria x ananassa HOM05D006100 ORTHO05D007539 2.5e-23 112.5 130 49.2
Duzib264G0645 Durio zibethinus HOM05D006100 ORTHO05D007539 4.2e-23 111.7 79 74.7
Sed0016253 Sechium edule HOM05D006100 ORTHO05D007539 4.2e-23 111.7 97 66.0
FvH4_1g13380 Fragaria vesca HOM05D006100 ORTHO05D007539 9.4e-23 110.5 130 48.5
FAN26G0501 Fragaria x ananassa HOM05D006100 ORTHO05D007539 9.4e-23 110.5 129 49.6
TWI09G0021 Tripterygium wilfordii HOM05D006100 ORTHO05D007539 1.2e-22 110.2 127 55.1
Atru.chr3.567 Acer truncatum HOM05D006100 ORTHO05D007539 1.6e-22 109.8 134 51.5
Aqoxy6G01099 Aquilegia oxysepala HOM05D006100 ORTHO05D007539 1.6e-22 109.8 134 50.0
BcaB02g09991 Brassica carinata HOM05D006100 ORTHO05D007539 3.6e-22 108.6 130 50.8
ECA232G0790 Erigeron canadensis HOM05D006100 ORTHO05D007539 3.6e-22 108.6 135 51.9
RcHm_v2.0_Chr2g0101741 Rosa chinensis HOM05D006100 ORTHO05D007539 4.7e-22 108.2 130 50.0
HanXRQChr11g0324821 Helianthus annuus HOM05D006100 ORTHO05D007539 8.0e-22 107.5 126 50.8
RcHm_v2.0_Chr2g0101751 Rosa chinensis HOM05D006100 ORTHO05D007539 8.0e-22 107.5 134 47.8
CANSAT01G1084 Cannabis sativa HOM05D006100 ORTHO05D007539 1.4e-21 106.7 123 51.2
Cfa004303 Carpinus fangiana HOM05D006100 ORTHO05D007539 2.3e-21 105.9 122 54.9
Gohir.A11G184500 Gossypium hirsutum HOM05D006100 ORTHO05D007539 2.3e-21 105.9 78 65.4
MD02G1148600 Malus domestica HOM05D006100 ORTHO05D007539 3.0e-21 105.5 131 49.6
PGR119G0418 Punica granatum HOM05D006100 ORTHO05D007539 6.7e-21 104.4 128 51.6
CiPaw.01G037400 Carya illinoinensis HOM05D006100 ORTHO05D007539 1.1e-20 103.6 109 55.0
PSO675G2321 Papaver somniferum HOM05D006100 ORTHO05D007539 1.1e-20 103.6 148 48.6
Gohir.A10G094900 Gossypium hirsutum HOM05D006100 ORTHO05D007539 2.0e-20 102.8 131 51.9
Nn5g29589 Nelumbo nucifera HOM05D006100 ORTHO05D007539 2.0e-20 102.8 132 48.5
Actinidia19182 Actinidia chinensis HOM05D006100 ORTHO05D007539 2.6e-20 102.4 118 54.2
Rhsim08G0115500 Rhododendron simsii HOM05D006100 ORTHO05D007539 4.4e-20 101.7 137 48.2
vmacro17841 Vaccinium macrocarpon HOM05D006100 ORTHO05D007539 7.4e-20 100.9 82 64.6
Cpa.g.sc6.110 Carica papaya HOM05D006100 ORTHO05D007539 1.7e-19 99.8 134 49.3
FAN23G0264 Fragaria x ananassa HOM05D006100 ORTHO05D007539 2.8e-19 99.0 85 63.5
Aa31LG1G15340 Aethionema arabicum HOM05D006100 ORTHO05D007539 3.7e-19 98.6 69 71.0
MD15G1262800 Malus domestica HOM05D006100 ORTHO05D007539 3.7e-19 98.6 82 64.6
PGR102G3048 Punica granatum HOM05D006100 ORTHO05D007539 3.7e-19 98.6 104 56.7
CSS0018588 Camellia sinensis var. sinensis HOM05D006100 ORTHO05D007539 4.8e-19 98.2 132 48.5
PSO541G1538 Papaver somniferum HOM05D006100 ORTHO05D007539 4.8e-19 98.2 150 45.3
FAN28G0382 Fragaria x ananassa HOM05D006100 ORTHO05D007539 8.2e-19 97.4 61 77.0
BcaC03g18400 Brassica carinata HOM05D006100 ORTHO05D007539 1.8e-18 96.3 63 74.6
C02p64790 Brassica napus HOM05D006100 ORTHO05D007539 1.8e-18 96.3 63 74.6
BolC2t12540H Brassica oleracea HOM05D006100 ORTHO05D007539 1.8e-18 96.3 63 74.6
A02p44400 Brassica napus HOM05D006100 ORTHO05D007539 2.4e-18 95.9 128 50.8
BraA02t09357Z Brassica rapa HOM05D006100 ORTHO05D007539 2.4e-18 95.9 128 50.8
Eucgr.I02450 Eucalyptus grandis HOM05D006100 ORTHO05D007539 2.0e-17 92.8 86 58.1
FAN26G1330 Fragaria x ananassa HOM05D006100 ORTHO05D007539 3.5e-17 92.0 66 71.2
ClCG01G019510 Citrullus lanatus HOM05D006100 ORTHO05D007539 7.7e-17 90.9 122 50.0
CsaV3_6G046200 Cucumis sativus L. HOM05D006100 ORTHO05D007539 7.7e-17 90.9 122 48.4
Oeu009416.1 Olea europaea HOM05D006100 ORTHO05D007539 7.7e-17 90.9 133 42.1
Glyma.16G140500 Glycine max HOM05D006100 ORTHO05D007539 1.0e-16 90.5 124 52.4
Nitab4.5_0003233g0010 Nicotiana tabacum HOM05D006100 ORTHO05D007539 1.0e-16 90.5 106 50.9
GSVIVG01018974001 Vitis vinifera HOM05D006100 ORTHO05D007539 1.3e-16 90.1 101 52.5
MD02G1148700 Malus domestica HOM05D006100 ORTHO05D007539 2.2e-16 89.4 130 43.1
Oeu041448.1 Olea europaea HOM05D006100 ORTHO05D007539 2.2e-16 89.4 133 42.1
Gohir.D10G093000 Gossypium hirsutum HOM05D006100 ORTHO05D007539 2.9e-16 89.0 132 48.5
Manes.01G135000 Manihot esculenta HOM05D006100 ORTHO05D007539 6.5e-16 87.8 111 52.3
MSTRG.2759 Avicennia marina HOM05D006100 ORTHO05D007539 8.5e-16 87.4 129 44.2
Nitab4.5_0001385g0150 Nicotiana tabacum HOM05D006100 ORTHO05D007539 1.1e-15 87.0 129 47.3
Prupe.7G153800 Prunus persica HOM05D006100 ORTHO05D007539 1.1e-15 87.0 134 41.0
Os03g0723400 Oryza sativa ssp. japonica HOM05D006100 ORTHO05D007539 1.9e-15 86.3 75 56.0
TAR376G0804 Trochodendron aralioides HOM05D001794 ORTHO05D004177 1.9e-15 86.3 110 51.8
Peaxi162Scf00515g00519 Petunia axillaris HOM05D006100 ORTHO05D007539 2.5e-15 85.9 112 50.9
Nitab4.5_0000434g0150 Nicotiana tabacum HOM05D006100 ORTHO05D007539 5.5e-15 84.7 105 53.3
Sopen02g013800 Solanum pennellii HOM05D006100 ORTHO05D007539 1.0e-13 80.5 129 45.0
CAN.G358.97 Capsicum annuum HOM05D006100 ORTHO05D007539 1.4e-13 80.1 118 45.8
Solyc02g062770.2 Solanum lycopersicum HOM05D006100 ORTHO05D007539 1.4e-13 80.1 135 43.0
EL10Ac6g15568 Beta vulgaris HOM05D006100 ORTHO05D007539 3.0e-13 79.0 133 42.1
unitig_899.g14492 Utricularia gibba HOM05D006100 ORTHO05D007539 3.0e-13 79.0 106 43.4
Migut.H00995 Erythranthe guttata HOM05D006100 ORTHO05D007539 6.8e-13 77.8 112 49.1
PGSC0003DMG400015478 Solanum tuberosum HOM05D006100 ORTHO05D007539 8.8e-13 77.4 78 56.4
Nitab4.5_0000136g0440 Nicotiana tabacum HOM05D006100 ORTHO05D007539 1.5e-12 76.6 136 40.4
Lj4g0020328 Lotus japonicus HOM05D006100 ORTHO05D007539 5.7e-12 74.7 124 47.6
Peaxi162Scf00008g03716 Petunia axillaris HOM05D006100 ORTHO05D007539 7.5e-12 74.3 61 63.9
SGA_v2.0_scaffold276G46633 Striga asiatica HOM05D006100 ORTHO05D007539 9.8e-12 73.9 115 42.6
Solyc02g085330.1 Solanum lycopersicum HOM05D006100 ORTHO05D007539 1.4e-10 70.1 99 47.5
CDE01G0731 Ceratophyllum demersum HOM05D006100 ORTHO05D007539 1.8e-10 69.7 107 44.9
Sopen02g030020 Solanum pennellii HOM05D006100 ORTHO05D007539 1.8e-10 69.7 87 48.3
AUR62004046 Chenopodium quinoa HOM05D006100 ORTHO05D007539 5.4e-10 68.2 117 41.0
CSS0029658 Camellia sinensis var. sinensis HOM05D006100 ORTHO05D007539 7.0e-10 67.8 82 48.8
MBI16_g38642_MAGBIO Magnolia biondii HOM05D006100 ORTHO05D007539 7.0e-10 67.8 85 49.4
DCAR_025920 Daucus carota HOM05D006100 ORTHO05D007539 9.1e-10 67.4 62 58.1
unitig_21.g20955 Utricularia gibba HOM05D003234 ORTHO05D003635 9.1e-10 67.4 92 50.0
MELO3C007824.2 Cucumis melo HOM05D006100 ORTHO05D007539 7.7e-09 64.3 81 46.9
Oeu033643.1 Olea europaea HOM05D006100 ORTHO05D007539 7.7e-09 64.3 56 62.5
AUR62007561 Chenopodium quinoa HOM05D006100 ORTHO05D007539 1.0e-08 63.9 135 38.5
Gorai.011G102200 Gossypium raimondii HOM05D006100 ORTHO05D007539 8.5e-08 60.8 91 46.2
HanXRQChr16g0530351 Helianthus annuus HOM05D006100 ORTHO05D007539 8.5e-08 60.8 115 40.9
Lalb_Chr09g0333561 Lupinus albus HOM05D006100 ORTHO05D007539 2.5e-07 59.3 124 39.5
Sc03g0002950 Simmondsia chinensis HOM05D006100 ORTHO05D007539 3.6e-06 55.5 115 37.4
Lsat_1_v5_gn_3_76280 Lactuca sativa HOM05D006100 ORTHO05D007539 6.1e-06 54.7 129 34.9


User provided reference genes

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