Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0015504 Lotus japonicus HOM05D007518 ORTHO05D008168 2.7e-62 242.3 165 100.0
Glyma.11G067100 Glycine max HOM05D007518 ORTHO05D008168 2.0e-41 172.9 171 80.1
Haze_15107 Corylus avellana HOM05D007518 ORTHO05D008168 2.2e-40 169.5 164 79.3
Medtr5g019920 Medicago truncatula HOM05D007518 ORTHO05D008168 1.1e-39 167.2 171 78.9
Cfa004294 Carpinus fangiana HOM05D007518 ORTHO05D008168 1.9e-39 166.4 169 78.7
CiPaw.02G016200 Carya illinoinensis HOM05D007518 ORTHO05D008168 2.1e-38 162.9 170 74.7
arahy.Tifrunner.gnm1.ann1.5UMV3I Arachis hypogaea HOM05D007518 ORTHO05D008168 2.7e-38 162.5 168 79.2
Lalb_Chr09g0322501 Lupinus albus HOM05D007518 ORTHO05D008168 7.8e-38 161.0 167 76.6
arahy.Tifrunner.gnm1.ann1.RRU65L Arachis hypogaea HOM05D007518 ORTHO05D008168 2.3e-37 159.5 165 78.2
TPR.G28676 Trifolium pratense HOM05D007518 ORTHO05D008168 2.3e-37 159.5 172 76.2
Phvul.002G029100 Phaseolus vulgaris HOM05D007518 ORTHO05D008168 3.0e-37 159.1 171 76.6
VMungo1215G2461 Vigna mungo HOM05D007518 ORTHO05D008168 1.9e-36 156.4 166 77.1
QL06p045656 Quercus lobata HOM05D007518 ORTHO05D008168 3.3e-36 155.6 162 75.3
Gohir.D03G015500 Gossypium hirsutum HOM05D007518 ORTHO05D008168 4.7e-35 151.8 169 70.4
TWI53G0381 Tripterygium wilfordii HOM05D007518 ORTHO05D008168 6.2e-35 151.4 166 73.5
Nn1g05049 Nelumbo nucifera HOM05D007518 ORTHO05D008168 8.1e-35 151.0 169 73.4
Gorai.003G015700 Gossypium raimondii HOM05D007518 ORTHO05D008168 1.1e-34 150.6 169 69.8
Cfa004293 Carpinus fangiana HOM05D007518 ORTHO05D008168 1.4e-34 150.2 165 75.8
Eucgr.I02457 Eucalyptus grandis HOM05D007518 ORTHO05D008168 1.8e-34 149.8 136 84.6
CSS0014655 Camellia sinensis var. sinensis HOM05D007518 ORTHO05D008168 2.4e-34 149.4 169 74.0
PSO541G1957 Papaver somniferum HOM05D007518 ORTHO05D008168 2.4e-34 149.4 173 71.7
RcHm_v2.0_Chr2g0101891 Rosa chinensis HOM05D007518 ORTHO05D008168 3.1e-34 149.1 156 73.7
Gohir.A02G164600 Gossypium hirsutum HOM05D007518 ORTHO05D008168 5.2e-34 148.3 169 69.8
Prupe.7G152700 Prunus persica HOM05D007518 ORTHO05D008168 8.9e-34 147.5 164 73.2
Atru.chr3.555 Acer truncatum HOM05D007518 ORTHO05D008168 2.6e-33 146.0 172 69.2
CANSAT01G2215 Cannabis sativa HOM05D007518 ORTHO05D008168 2.6e-33 146.0 165 70.9
FvH4_1g13510 Fragaria vesca HOM05D007518 ORTHO05D008168 3.4e-33 145.6 166 71.7
FAN19G2612 Fragaria x ananassa HOM05D007518 ORTHO05D008168 3.4e-33 145.6 166 71.7
Sabra07G0023900 Salix brachista HOM05D007518 ORTHO05D008168 3.4e-33 145.6 165 70.3
Thecc.01G037800 Theobroma cacao HOM05D007518 ORTHO05D008168 3.4e-33 145.6 169 70.4
FAN28G1656 Fragaria x ananassa HOM05D007518 ORTHO05D008168 5.8e-33 144.8 166 71.1
TAR628G0256 Trochodendron aralioides HOM05D007518 ORTHO05D008168 9.9e-33 144.1 171 69.6
COL.COLO4_22099 Corchorus olitorius HOM05D007518 ORTHO05D008168 1.3e-32 143.7 172 68.0
CsaV3_6G046170 Cucumis sativus L. HOM05D007518 ORTHO05D008168 1.7e-32 143.3 156 75.0
Ciclev10026615m.g Citrus clementina HOM05D007518 ORTHO05D008168 4.9e-32 141.7 179 67.6
MELO3C007820.2 Cucumis melo HOM05D007518 ORTHO05D008168 4.9e-32 141.7 156 73.7
PSO675G1394 Papaver somniferum HOM05D007518 ORTHO05D008168 6.4e-32 141.4 173 69.9
Ca_00386_v3 Cicer arietinum L. HOM05D007518 ORTHO05D008168 8.4e-32 141.0 128 72.7
Aqoxy6G01075 Aquilegia oxysepala HOM05D007518 ORTHO05D008168 1.4e-31 140.2 164 72.0
MD02G1150400 Malus domestica HOM05D007518 ORTHO05D008168 1.4e-31 140.2 164 69.5
MBI16_g37747_MAGBIO Magnolia biondii HOM05D007518 ORTHO05D008168 2.4e-31 139.4 170 67.6
MD15G1264900 Malus domestica HOM05D007518 ORTHO05D008168 2.4e-31 139.4 167 71.9
Cc07_g09360 Coffea canephora HOM05D007518 ORTHO05D008168 4.2e-31 138.7 170 70.0
PGR119G2546 Punica granatum HOM05D007518 ORTHO05D008168 4.2e-31 138.7 166 70.5
Rhsim10G0067800 Rhododendron simsii HOM05D007518 ORTHO05D008168 7.1e-31 137.9 170 69.4
Aa31LG4G18840 Aethionema arabicum HOM05D007518 ORTHO05D008168 2.1e-30 136.3 160 71.9
Ah.03g139360 Amaranthus hybridus HOM05D007518 ORTHO05D008168 2.1e-30 136.3 132 81.1
Sp5g11540 Schrenkiella parvula HOM05D007518 ORTHO05D008168 2.1e-30 136.3 163 70.6
Potri.007G027400 Populus trichocarpa HOM05D007518 ORTHO05D008168 2.7e-30 136.0 164 67.1
A06p05270 Brassica napus HOM05D007518 ORTHO05D008168 3.5e-30 135.6 162 70.4
BraA06t23735Z Brassica rapa HOM05D007518 ORTHO05D008168 3.5e-30 135.6 162 70.4
THA.LOC104821280 Tarenaya hassleriana HOM05D007518 ORTHO05D008168 3.5e-30 135.6 161 68.3
AL5G30840 Arabidopsis lyrata HOM05D007518 ORTHO05D008168 4.6e-30 135.2 161 68.9
Carub.0005s1701 Capsella rubella HOM05D007518 ORTHO05D008168 4.6e-30 135.2 162 69.8
Thhalv10010782m.g Eutrema salsugineum HOM05D007518 ORTHO05D008168 4.6e-30 135.2 161 70.8
C05p06340 Brassica napus HOM05D007518 ORTHO05D008168 6.0e-30 134.8 162 69.8
Manes.01G134000 Manihot esculenta HOM05D007518 ORTHO05D008168 1.0e-29 134.0 166 66.9
BolC5t29390H Brassica oleracea HOM05D007518 ORTHO05D008168 1.3e-29 133.7 162 69.8
Sed0026205 Sechium edule HOM05D007518 ORTHO05D008168 1.3e-29 133.7 156 70.5
DCAR_021444 Daucus carota HOM05D007518 ORTHO05D008168 1.7e-29 133.3 136 78.7
Nitab4.5_0016476g0010 Nicotiana tabacum HOM05D007518 ORTHO05D008168 2.3e-29 132.9 128 83.6
AT3G50685 Arabidopsis thaliana HOM05D007518 ORTHO05D008168 3.9e-29 132.1 161 67.7
CAN.G1028.6 Capsicum annuum HOM05D007518 ORTHO05D008168 5.1e-29 131.7 166 68.1
HanXRQChr16g0530261 Helianthus annuus HOM05D007518 ORTHO05D008168 6.6e-29 131.3 162 69.8
CARHR160200 Cardamine hirsuta HOM05D007518 ORTHO05D008168 1.1e-28 130.6 161 65.8
Pp3c15_7720 Physcomitrium patens HOM05D007518 ORTHO05D008168 1.1e-28 130.6 158 63.9
Solyc03g034070.1 Solanum lycopersicum HOM05D007518 ORTHO05D008168 1.1e-28 130.6 115 88.7
Sopen03g006850 Solanum pennellii HOM05D007518 ORTHO05D008168 1.1e-28 130.6 115 88.7
AUR62003171 Chenopodium quinoa HOM05D007518 ORTHO05D008168 1.9e-28 129.8 146 75.3
Mapoly0168s0019 Marchantia polymorpha HOM05D007518 ORTHO05D008168 1.9e-28 129.8 151 70.2
PGSC0003DMG400017778 Solanum tuberosum HOM05D007518 ORTHO05D008168 5.6e-28 128.3 161 70.2
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 1.3e-27 127.1 133 78.2
Duzib187G0536 Durio zibethinus HOM05D007518 ORTHO05D008168 1.6e-27 126.7 106 66.0
Migut.L00282 Erythranthe guttata HOM05D007518 ORTHO05D008168 2.8e-27 125.9 161 65.2
Lsat_1_v5_gn_3_78660 Lactuca sativa HOM05D007518 ORTHO05D008168 1.1e-26 124.0 174 65.5
Lj2P450T11 Lonicera japonica HOM05D007518 ORTHO05D008168 1.1e-26 124.0 130 79.2
Oeu007443.1 Olea europaea HOM05D007518 ORTHO05D008168 1.4e-26 123.6 166 66.9
Sc03g0000780 Simmondsia chinensis HOM05D007518 ORTHO05D008168 4.0e-26 122.1 163 66.3
Nitab4.5_0001038g0130 Nicotiana tabacum HOM05D007518 ORTHO05D008168 5.3e-26 121.7 128 79.7
Psat2g160680 Pisum sativum HOM05D007518 ORTHO05D008168 2.6e-25 119.4 122 86.1
unitig_62.g23458 Utricularia gibba HOM05D007518 ORTHO05D008168 5.8e-25 118.2 128 73.4
ECA246G0481 Erigeron canadensis HOM05D000085 ORTHO05D000274 9.9e-25 117.5 137 75.2
SEGI_19868 Sequoiadendron giganteum HOM05D007518 ORTHO05D008168 1.9e-23 113.2 166 60.2
CBR_g37409 Chara braunii HOM05D007518 ORTHO05D008168 2.4e-23 112.8 116 51.7
BcaB07g34066 Brassica carinata HOM05D007518 ORTHO05D008168 4.2e-23 112.1 159 52.2
ATR0733G025 Amborella trichopoda HOM05D007518 ORTHO05D008168 7.1e-23 111.3 125 72.8
Peaxi162Scf00751g00045 Petunia axillaris HOM05D007518 ORTHO05D008168 1.2e-22 110.5 128 61.7
SMO361G0359 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 1.6e-22 110.2 113 75.2
SGA_v2.0_scaffold248G44914 Striga asiatica HOM05D007518 ORTHO05D008168 3.5e-22 109.0 160 63.1
Actinidia12117 Actinidia chinensis HOM05D007518 ORTHO05D008168 1.0e-21 107.5 110 57.3
Dinv26823 Davidia involucrata HOM05D002420 ORTHO05D002422 6.7e-21 104.8 157 62.4
BcaB07g34065 Brassica carinata HOM05D007518 ORTHO05D008168 1.1e-20 104.0 97 58.8
AagrBONN_evm.TU.Sc2ySwM_228.2926 Anthoceros agrestis HOM05D007518 ORTHO05D008168 1.4e-18 97.1 128 69.5
HPP92_023606 Vanilla planifolia HOM05D007518 ORTHO05D008168 4.5e-17 92.0 131 66.4
Zm00001eb098970 Zea mays HOM05D007518 ORTHO05D008168 2.9e-16 89.4 154 59.7
Actinidia02774 Actinidia chinensis HOM05D007518 ORTHO05D008168 2.1e-14 83.2 129 44.2
unitig_65.g29889 Utricularia gibba HOM05D007518 ORTHO05D008168 7.9e-14 81.3 89 69.7
PRCOL_00004191 Prasinoderma coloniale HOM05D007518 ORTHO05D008168 1.0e-13 80.9 114 66.7
Cre01.g043200 Chlamydomonas reinhardtii HOM05D007518 ORTHO05D008168 2.3e-13 79.7 71 57.7
SMO361G0415 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 6.7e-13 78.2 118 38.1
Os10g0213700 Oryza sativa ssp. japonica HOM05D007518 ORTHO05D008168 4.5e-09 65.5 140 57.9
MCO12G314 Micromonas commoda HOM05D007518 ORTHO05D008168 5.8e-09 65.1 39 69.2
Atru.chr4.788 Acer truncatum HOM05D007518 ORTHO05D008168 1.2e-06 57.4 34 82.4


User provided reference genes

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