Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0014908 Lotus japonicus HOM05D022449 ORTHO05D025770 0.0e+00 1211.8 666 100.0
Lj1g0006605 Lotus japonicus HOM05D022449 ORTHO05D025770 1.5e-260 902.9 737 73.4
LjContig00528g0023580 Lotus japonicus HOM05D022449 ORTHO05D025770 1.4e-218 763.5 729 63.5
LjContig00131g0013150 Lotus japonicus HOM05D022449 ORTHO05D025770 1.5e-204 716.8 668 65.7
Lj5g0003641 Lotus japonicus HOM05D022449 ORTHO05D025770 2.4e-29 134.8 110 65.5
Medtr1g049020 Medicago truncatula HOM05D037930 ORTHO05D048905 9.2e-13 79.7 199 28.6
Medtr6g039060 Medicago truncatula HOM05D008107 ORTHO05D010019 3.5e-12 77.8 321 23.1
Medtr5g049460 Medicago truncatula HOM05D008107 ORTHO05D010019 1.7e-11 75.5 319 22.6
Medtr1465s0010 Medicago truncatula HOM05D008107 ORTHO05D010019 2.3e-11 75.1 247 28.3
Medtr0752s0020 Medicago truncatula HOM05D008107 ORTHO05D010019 1.1e-10 72.8 256 24.6
Medtr1g082820 Medicago truncatula HOM05D037930 ORTHO05D048905 1.9e-10 72.0 122 32.0
TPR.G32012 Trifolium pratense HOM05D021817 ORTHO05D010019 3.3e-10 71.2 349 21.8
Medtr0003s0350 Medicago truncatula HOM05D037930 ORTHO05D010019 4.3e-10 70.9 227 26.0
Medtr4g053915 Medicago truncatula HOM05D008107 ORTHO05D010019 2.8e-09 68.2 342 24.0
Medtr0132s0050 Medicago truncatula HOM05D008107 ORTHO05D010019 4.7e-09 67.4 295 24.7
Medtr0387s0030 Medicago truncatula HOM05D008107 ORTHO05D010019 4.7e-09 67.4 281 24.6
Medtr0454s0020 Medicago truncatula HOM05D008107 ORTHO05D010019 4.0e-08 64.3 279 24.7
Medtr4g119430 Medicago truncatula HOM05D008107 ORTHO05D010019 9.0e-08 63.2 280 24.3
Medtr7g009270 Medicago truncatula HOM05D008107 ORTHO05D010019 9.0e-08 63.2 280 24.3
TPR.G10931 Trifolium pratense HOM05D008107 ORTHO05D010019 2.0e-07 62.0 58 41.4
Ca_23934_v3 Cicer arietinum L. HOM05D009076 ORTHO05D011330 5.8e-07 60.5 227 27.8
TPR.G27575 Trifolium pratense HOM05D008107 ORTHO05D010019 7.6e-07 60.1 58 39.7
Ca_20041_v3 Cicer arietinum L. HOM05D009076 ORTHO05D011330 1.3e-06 59.3 80 36.2
Medtr0322s0040 Medicago truncatula HOM05D008107 ORTHO05D010019 2.9e-06 58.2 248 23.4
Medtr3g047490 Medicago truncatula HOM05D008107 ORTHO05D010019 3.8e-06 57.8 251 23.5
Medtr3g048350 Medicago truncatula HOM05D008107 ORTHO05D010019 8.4e-06 56.6 280 24.3


User provided reference genes

Program Settings