Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj2g0014685 Lotus japonicus HOM05D003374 ORTHO05D009415 3.4e-76 288.1 134 100.0
Ca_24943_v3 Cicer arietinum L. HOM05D003374 ORTHO05D009415 1.2e-57 226.5 123 83.7
TPR.G25106 Trifolium pratense HOM05D003374 ORTHO05D009415 2.1e-57 225.7 123 82.1
Oeu022072.1 Olea europaea HOM05D003374 ORTHO05D009415 8.0e-57 223.8 125 79.2
TWI73G0214 Tripterygium wilfordii HOM05D003374 ORTHO05D009415 1.8e-56 222.6 127 78.7
Medtr5g022990 Medicago truncatula HOM05D003374 ORTHO05D009415 3.0e-56 221.9 125 77.6
Glyma.11G081000 Glycine max HOM05D003374 ORTHO05D009415 4.0e-56 221.5 123 81.3
Psat2g152000 Pisum sativum HOM05D003374 ORTHO05D009415 4.0e-56 221.5 123 80.5
Cpa.g.sc6.314 Carica papaya HOM05D003374 ORTHO05D009415 1.5e-55 219.5 126 79.4
CiPaw.13G118300 Carya illinoinensis HOM05D003374 ORTHO05D009415 1.5e-55 219.5 125 80.0
CiPaw.08G125700 Carya illinoinensis HOM05D003374 ORTHO05D009415 3.4e-55 218.4 125 80.0
Manes.01G150900 Manihot esculenta HOM05D003374 ORTHO05D009415 3.4e-55 218.4 125 80.0
CsaV3_3G000500 Cucumis sativus L. HOM05D003374 ORTHO05D009415 4.4e-55 218.0 123 79.7
Lalb_Chr05g0212171 Lupinus albus HOM05D003374 ORTHO05D009415 4.4e-55 218.0 123 79.7
Phvul.002G104600 Phaseolus vulgaris HOM05D003374 ORTHO05D009415 5.7e-55 217.6 123 80.5
Oeu050858.1 Olea europaea HOM05D003374 ORTHO05D009415 1.3e-54 216.5 125 76.0
Nn6g31909 Nelumbo nucifera HOM05D003374 ORTHO05D009415 1.7e-54 216.1 127 78.7
Gorai.003G005800 Gossypium raimondii HOM05D003374 ORTHO05D009415 2.8e-54 215.3 125 76.8
QL06p052083 Quercus lobata HOM05D003374 ORTHO05D009415 3.7e-54 214.9 123 78.9
COL.COLO4_22496 Corchorus olitorius HOM05D003374 ORTHO05D009415 6.3e-54 214.2 124 76.6
Cfa007030 Carpinus fangiana HOM05D003374 ORTHO05D009415 8.3e-54 213.8 124 79.8
MD02G1123500 Malus domestica HOM05D003374 ORTHO05D009415 8.3e-54 213.8 127 77.2
Thecc.01G011400 Theobroma cacao HOM05D003374 ORTHO05D009415 1.1e-53 213.4 125 75.2
Duzib147G1310 Durio zibethinus HOM05D003374 ORTHO05D009415 2.4e-53 212.2 125 74.4
Migut.C00507 Erythranthe guttata HOM05D003374 ORTHO05D009415 3.1e-53 211.8 125 76.8
Gohir.D03G005400 Gossypium hirsutum HOM05D003374 ORTHO05D009415 3.1e-53 211.8 125 75.2
Duzib147G0846 Durio zibethinus HOM05D003374 ORTHO05D009415 4.1e-53 211.5 125 74.4
Haze_03703 Corylus avellana HOM05D003374 ORTHO05D009415 5.4e-53 211.1 123 78.9
Prupe.7G175100 Prunus persica HOM05D003374 ORTHO05D009415 1.2e-52 209.9 125 76.8
Gohir.A02G174400 Gossypium hirsutum HOM05D003374 ORTHO05D009415 2.7e-52 208.8 125 73.6
Rhsim10G0205600 Rhododendron simsii HOM05D003374 ORTHO05D009415 2.7e-52 208.8 125 75.2
Eucgr.J02491 Eucalyptus grandis HOM05D003374 ORTHO05D009415 4.5e-52 208.0 127 74.8
DCAR_014045 Daucus carota HOM05D003374 ORTHO05D009415 5.9e-52 207.6 127 74.8
Sopen02g028140 Solanum pennellii HOM05D003374 ORTHO05D009415 5.9e-52 207.6 125 74.4
GSVIVG01005194001 Vitis vinifera HOM05D003374 ORTHO05D009415 5.9e-52 207.6 122 77.0
CANSAT25G2243 Cannabis sativa HOM05D003374 ORTHO05D009415 7.7e-52 207.2 123 77.2
PGSC0003DMG400003664 Solanum tuberosum HOM05D003374 ORTHO05D009415 1.0e-51 206.8 125 74.4
Atru.chr3.908 Acer truncatum HOM05D003374 ORTHO05D009415 1.7e-51 206.1 125 74.4
SalBow7G1184 Salvia bowleyana HOM05D003374 ORTHO05D009415 1.7e-51 206.1 125 75.2
THA.LOC104807515 Tarenaya hassleriana HOM05D003374 ORTHO05D009415 2.2e-51 205.7 126 76.2
Sabra05G0088200 Salix brachista HOM05D003374 ORTHO05D009415 3.8e-51 204.9 125 75.2
Solyc02g083360.1 Solanum lycopersicum HOM05D003374 ORTHO05D009415 3.8e-51 204.9 125 72.8
AT2G17705 Arabidopsis thaliana HOM05D003374 ORTHO05D009415 8.5e-51 203.8 126 73.0
FvH4_1g11071 Fragaria vesca HOM05D003374 ORTHO05D009415 8.5e-51 203.8 127 72.4
CSS0011665 Camellia sinensis var. sinensis HOM05D003374 ORTHO05D009415 1.1e-50 203.4 125 72.8
Sc16g0001810 Simmondsia chinensis HOM05D003374 ORTHO05D009415 1.5e-50 203.0 123 72.4
TAR376G1073 Trochodendron aralioides HOM05D003374 ORTHO05D009415 1.9e-50 202.6 125 72.0
CAN.G890.27 Capsicum annuum HOM05D003374 ORTHO05D009415 2.5e-50 202.2 125 72.0
CARHR107990 Cardamine hirsuta HOM05D003374 ORTHO05D009415 3.2e-50 201.8 124 73.4
Cc07_g11320 Coffea canephora HOM05D003374 ORTHO05D009415 3.2e-50 201.8 125 71.2
Cc08_g04870 Coffea canephora HOM05D003374 ORTHO05D009415 3.2e-50 201.8 125 71.2
AL3G50700 Arabidopsis lyrata HOM05D003374 ORTHO05D009415 4.2e-50 201.4 124 73.4
Potri.005G107700 Populus trichocarpa HOM05D003374 ORTHO05D009415 4.2e-50 201.4 125 74.4
Ah.03g134290 Amaranthus hybridus HOM05D003374 ORTHO05D009415 5.5e-50 201.1 123 71.5
SGA_v2.0_scaffold16G07586 Striga asiatica HOM05D003374 ORTHO05D009415 5.5e-50 201.1 125 73.6
BcaC06g36302 Brassica carinata HOM05D003374 ORTHO05D009415 2.1e-49 199.1 124 73.4
CSS0020449 Camellia sinensis var. sinensis HOM05D003374 ORTHO05D009415 3.6e-49 198.4 125 71.2
Lsat_1_v5_gn_2_75400 Lactuca sativa HOM05D003374 ORTHO05D009415 3.6e-49 198.4 125 72.0
TAR625G1333 Trochodendron aralioides HOM05D003374 ORTHO05D009415 3.6e-49 198.4 120 75.0
BcaB03g16543 Brassica carinata HOM05D003374 ORTHO05D009415 4.7e-49 198.0 125 72.8
Aqoxy6G01987 Aquilegia oxysepala HOM05D003374 ORTHO05D009415 6.1e-49 197.6 125 69.6
BraA07t28129Z Brassica rapa HOM05D003374 ORTHO05D009415 6.1e-49 197.6 124 73.4
CSS0026426 Camellia sinensis var. sinensis HOM05D003374 ORTHO05D009415 6.1e-49 197.6 111 79.3
Ciclev10026501m.g Citrus clementina HOM05D003374 ORTHO05D009415 6.1e-49 197.6 125 71.2
Thhalv10023081m.g Eutrema salsugineum HOM05D003374 ORTHO05D009415 6.1e-49 197.6 122 73.8
C07p05590 Brassica napus HOM05D003374 ORTHO05D009415 1.4e-48 196.4 124 72.6
Carub.0003s3181 Capsella rubella HOM05D003374 ORTHO05D009415 1.8e-48 196.1 124 71.0
Dinv40145 Davidia involucrata HOM05D003374 ORTHO05D009415 1.8e-48 196.1 112 77.7
PSO541G5712 Papaver somniferum HOM05D003374 ORTHO05D009415 1.8e-48 196.1 125 69.6
RcHm_v2.0_Chr2g0098341 Rosa chinensis HOM05D003374 ORTHO05D009415 1.8e-48 196.1 127 70.1
Sp3g31110 Schrenkiella parvula HOM05D003374 ORTHO05D009415 1.8e-48 196.1 124 73.4
ATR0661G346 Amborella trichopoda HOM05D003374 ORTHO05D009415 2.0e-47 192.6 129 70.5
PSO675G5709 Papaver somniferum HOM05D003374 ORTHO05D009415 2.0e-47 192.6 125 68.0
HPP92_015019 Vanilla planifolia HOM05D003374 ORTHO05D009415 1.7e-46 189.5 123 70.7
HPP92_028513 Vanilla planifolia HOM05D003374 ORTHO05D009415 1.7e-46 189.5 123 70.7
MD15G1237300 Malus domestica HOM05D003374 ORTHO05D009415 6.3e-46 187.6 145 62.8
unitig_26.g9807 Utricularia gibba HOM05D003374 ORTHO05D009415 7.0e-45 184.1 122 67.2
Actinidia22936 Actinidia chinensis HOM05D003374 ORTHO05D009415 1.2e-44 183.3 104 76.9
MSTRG.25049 Avicennia marina HOM05D003374 ORTHO05D009415 2.0e-44 182.6 109 73.4
Nitab4.5_0006892g0030 Nicotiana tabacum HOM05D003374 ORTHO05D009415 2.0e-44 182.6 104 76.0
Nitab4.5_0002105g0060 Nicotiana tabacum HOM05D003374 ORTHO05D009415 3.5e-44 181.8 104 75.0
MBI05_g46750_MAGBIO Magnolia biondii HOM05D003374 ORTHO05D009415 2.3e-43 179.1 108 73.1
BolC7t40958H Brassica oleracea HOM05D003374 ORTHO05D009415 6.6e-43 177.6 110 72.7
Os03g0136500 Oryza sativa ssp. japonica HOM05D003374 ORTHO05D009415 8.6e-43 177.2 130 61.5
SEGI_17874 Sequoiadendron giganteum HOM05D003374 ORTHO05D009415 8.6e-43 177.2 121 65.3
Aa31LG8G14980 Aethionema arabicum HOM05D003374 ORTHO05D009415 2.5e-42 175.6 108 73.1
HanXRQChr14g0442031 Helianthus annuus HOM05D003374 ORTHO05D009415 9.5e-42 173.7 117 65.0
MELO3C013742.2 Cucumis melo HOM05D003374 ORTHO05D009415 1.6e-41 172.9 98 76.5
Zm00001eb002870 Zea mays HOM05D003374 ORTHO05D009415 4.7e-41 171.4 126 61.9
A07p03300 Brassica napus HOM05D003374 ORTHO05D009415 1.4e-40 169.9 103 73.8
Sed0013270 Sechium edule HOM05D003374 ORTHO05D009415 3.0e-40 168.7 98 74.5
SMO013G0010 Selaginella moellendorffii HOM05D003374 ORTHO05D009415 5.0e-35 151.4 118 56.8
AagrBONN_evm.TU.Sc2ySwM_362.2709 Anthoceros agrestis HOM05D003374 ORTHO05D009415 8.6e-35 150.6 116 56.9
AagrBONN_evm.TU.Sc2ySwM_362.2707 Anthoceros agrestis HOM05D003374 ORTHO05D009415 6.2e-33 144.4 116 56.9
Sc16g0001870 Simmondsia chinensis HOM05D003374 ORTHO05D009415 8.9e-32 140.6 91 67.0
Glyma.01G162300 Glycine max HOM05D003374 ORTHO05D009415 3.7e-30 135.2 74 79.7
Pp3c17_11570 Physcomitrium patens HOM05D003374 ORTHO05D009415 6.4e-30 134.4 121 50.4
Pp3c1_28090 Physcomitrium patens HOM05D003374 ORTHO05D009415 3.5e-28 128.6 121 52.1
Pp3c2_13370 Physcomitrium patens HOM05D003374 ORTHO05D009415 1.0e-27 127.1 121 50.4
Mapoly0037s0042 Marchantia polymorpha HOM05D003374 ORTHO05D009415 4.3e-26 121.7 121 44.6
CBR_g80133 Chara braunii HOM05D003374 ORTHO05D009415 3.2e-21 105.5 107 42.1
Actinidia17404 Actinidia chinensis HOM05D003374 ORTHO05D009415 4.0e-16 88.6 99 45.5
SGA_v2.0_scaffold52G18966 Striga asiatica HOM05D003340 ORTHO05D003775 4.3e-10 68.6 128 32.8
Potri.005G070600 Populus trichocarpa HOM05D003340 ORTHO05D003775 8.1e-09 64.3 87 35.6
Sabra05G0057400 Salix brachista HOM05D003340 ORTHO05D003775 8.1e-09 64.3 85 35.3
Sopen04g027620 Solanum pennellii HOM05D003340 ORTHO05D003775 1.1e-08 63.9 129 31.8
Lsat_1_v5_gn_1_10021 Lactuca sativa HOM05D003340 ORTHO05D003775 1.8e-08 63.2 87 35.6
AUR62006909 Chenopodium quinoa HOM05D003340 ORTHO05D003775 3.1e-08 62.4 93 35.5
Lj4P627T24 Lonicera japonica HOM05D003340 ORTHO05D003775 5.2e-08 61.6 97 37.1
HPP92_013888 Vanilla planifolia HOM05D003340 ORTHO05D003775 6.8e-08 61.2 87 36.8
AagrBONN_evm.TU.Sc2ySwM_362.2682 Anthoceros agrestis HOM05D003340 ORTHO05D003775 1.2e-07 60.5 93 30.1
Nn1g08798 Nelumbo nucifera HOM05D003340 ORTHO05D003775 1.2e-07 60.5 88 33.0
Nn5g28288 Nelumbo nucifera HOM05D003340 ORTHO05D003775 2.6e-07 59.3 87 33.3
Hund17293 Selenicereus undatus HOM05D003340 ORTHO05D003775 2.6e-07 59.3 97 33.0
Aqoxy6G00217 Aquilegia oxysepala HOM05D003340 ORTHO05D003775 4.4e-07 58.5 127 30.7
MSTRG.25383 Avicennia marina HOM05D003340 ORTHO05D003775 4.4e-07 58.5 130 30.0
CSS0046765 Camellia sinensis var. sinensis HOM05D003340 ORTHO05D003775 4.4e-07 58.5 134 29.9
Oeu017298.1 Olea europaea HOM05D003340 ORTHO05D003775 4.4e-07 58.5 121 28.9
Hund21783 Selenicereus undatus HOM05D003340 ORTHO05D003775 5.8e-07 58.2 86 32.6
Eucgr.F04352 Eucalyptus grandis HOM05D003340 ORTHO05D003775 7.6e-07 57.8 127 31.5
Psat5g087400 Pisum sativum HOM05D003340 ORTHO05D003775 7.6e-07 57.8 127 29.1
SalBow7G3799 Salvia bowleyana HOM05D003340 ORTHO05D003775 7.6e-07 57.8 106 33.0
Ah.06g188530 Amaranthus hybridus HOM05D003340 ORTHO05D003775 1.7e-06 56.6 86 33.7
EL10Ac4g09660 Beta vulgaris HOM05D003340 ORTHO05D003775 1.7e-06 56.6 93 32.3
AUR62014338 Chenopodium quinoa HOM05D003340 ORTHO05D003775 1.7e-06 56.6 87 35.6
AUR62019080 Chenopodium quinoa HOM05D003340 ORTHO05D003775 1.7e-06 56.6 87 35.6
Os01g0833400 Oryza sativa ssp. japonica HOM05D003340 ORTHO05D003775 2.9e-06 55.8 148 29.7
VMungo1309G0419 Vigna mungo HOM05D003340 ORTHO05D003775 2.9e-06 55.8 127 30.7
Medtr3g088030 Medicago truncatula HOM05D003340 ORTHO05D003775 3.8e-06 55.5 129 28.7
PGR102G2107 Punica granatum HOM05D003340 ORTHO05D003775 3.8e-06 55.5 95 33.7
TAR381G1109 Trochodendron aralioides HOM05D003340 ORTHO05D003775 3.8e-06 55.5 126 27.8
CSS0003781 Camellia sinensis var. sinensis HOM05D003340 ORTHO05D003775 4.9e-06 55.1 125 30.4
GSVIVG01022376001 Vitis vinifera HOM05D003340 ORTHO05D003775 4.9e-06 55.1 84 33.3
Manes.02G163400 Manihot esculenta HOM05D003340 ORTHO05D003775 6.4e-06 54.7 87 33.3
Hund26810 Selenicereus undatus HOM05D003340 ORTHO05D003775 6.4e-06 54.7 87 32.2
HPP92_019003 Vanilla planifolia HOM05D003340 ORTHO05D003775 6.4e-06 54.7 90 32.2
Cc10_g11880 Coffea canephora HOM05D003340 ORTHO05D003775 8.4e-06 54.3 123 26.8
Rhsim06G0103500 Rhododendron simsii HOM05D003340 ORTHO05D003775 8.4e-06 54.3 89 33.7
Thecc.08G125400 Theobroma cacao HOM05D003340 ORTHO05D003775 8.4e-06 54.3 87 34.5


User provided reference genes

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